FFCP PHASE1:Hg19::chr10:29811632..29811647,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=6840 | |EntrezGene=entrezgene:6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11480 | |HGNC=HGNC:11480 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_uc010qdw.1_5end | |association_with_transcript=-68bp_to_uc010qdw.1_5end | ||
|cluster_id=chr10:29811632..29811647,- | |||
|coexpression_cluster_id=C610 | |coexpression_cluster_id=C610 | ||
|description=CAGE_peak_20_at_SVIL_5end | |description=CAGE_peak_20_at_SVIL_5end |
Revision as of 13:02, 23 July 2015
Short description: | p20@SVIL |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SVIL_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | -68bp_to_uc010qdw.1_5end |
EntrezGene: | 6840 |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p20@SVIL |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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melanocyte | 2.61e-88 | 10 |
melanoblast | 2.61e-88 | 10 |
light melanocyte | 2.14e-74 | 3 |
pigment cell | 3.14e-63 | 14 |
neurecto-epithelial cell | 2.14e-44 | 20 |
columnar/cuboidal epithelial cell | 5.54e-33 | 27 |
migratory neural crest cell | 4.33e-28 | 41 |
ecto-epithelial cell | 2.94e-26 | 34 |
neurectodermal cell | 7.47e-20 | 59 |
ectodermal cell | 2.20e-16 | 72 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
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dermal papilla | 1.81e-09 | 3 |
papillary layer of dermis | 1.81e-09 | 3 |
skin epidermis | 1.40e-07 | 15 |
outer epithelium | 1.40e-07 | 15 |
enveloping layer of ectoderm | 1.40e-07 | 15 |
Showing 1 to 5 of 5 entries