FFCP PHASE1:Hg19::chr10:5535798..5535807,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5535798..5535807,- | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_at_chr10:5535798..5535807,- | |description=CAGE_peak_at_chr10:5535798..5535807,- |
Latest revision as of 14:12, 23 July 2015
Short description: | p@chr10:5535798..5535807, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5535798..5535807, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr10:5535798..5535807- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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intestinal epithelial cell | 2.22e-40 | 4 |
epithelial cell of large intestine | 4.66e-21 | 2 |
epithelial cell of prostate | 1.83e-14 | 3 |
endo-epithelial cell | 2.66e-09 | 42 |
epithelial cell of alimentary canal | 5.70e-09 | 20 |
germ line cell | 5.08e-07 | 7 |
germ cell | 5.08e-07 | 7 |
endodermal cell | 6.14e-07 | 58 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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intestinal mucosa | 2.22e-40 | 4 |
wall of intestine | 2.22e-40 | 4 |
gastrointestinal system mucosa | 2.22e-40 | 4 |
gastrointestinal system epithelium | 2.22e-40 | 4 |
intestinal epithelium | 2.22e-40 | 4 |
epithelium of mucosa | 8.12e-21 | 8 |
simple columnar epithelium | 1.24e-18 | 9 |
rectum | 3.10e-11 | 4 |
intestine | 7.42e-10 | 17 |
hindgut | 2.36e-09 | 19 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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thoracic cancer | 3.79e-11 | 4 |
breast cancer | 3.79e-11 | 4 |
adenocarcinoma | 2.50e-07 | 25 |
Showing 1 to 3 of 3 entries