FFCP PHASE1:Hg19::chr12:19610636..19610653,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_ENST00000359165_5end | |association_with_transcript=-54bp_to_ENST00000359165_5end | ||
|cluster_id=chr12:19610636..19610653,- | |||
|coexpression_cluster_id=C408 | |coexpression_cluster_id=C408 | ||
|description=CAGE_peak_1_at_ENST00000359165_5end | |description=CAGE_peak_1_at_ENST00000359165_5end |
Latest revision as of 07:24, 24 July 2015
Short description: | p1@ENST00000359165 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000359165_5end |
Coexpression cluster: | C408_Basophils_CD14_amniotic_nasal_Natural_mature_CD34 |
Association with transcript: | -54bp_to_ENST00000359165_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ENST00000359165 |
---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.85e-12 | 3 |
nucleus pulposus cell of intervertebral disc | 3.24e-12 | 3 |
receptor cell | 8.02e-07 | 6 |
sensory epithelial cell | 8.02e-07 | 6 |
olfactory epithelial cell | 8.02e-07 | 6 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 3.24e-12 | 3 |
axial mesoderm | 3.24e-12 | 3 |
notochord | 3.24e-12 | 3 |
chordamesoderm | 3.24e-12 | 3 |
intervertebral cartilage | 7.49e-08 | 5 |
symphysis | 7.49e-08 | 5 |
nonsynovial joint | 7.49e-08 | 5 |
fibrous joint | 7.49e-08 | 5 |
cartilaginous joint | 7.49e-08 | 5 |
developing mesenchymal condensation | 7.49e-08 | 5 |
Showing 1 to 10 of 17 entries