FFCP PHASE1:Hg19::chr1:210407207..210407250,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=574036 | |EntrezGene=entrezgene:574036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC=32019 | |HGNC=HGNC:32019 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=215bp_to_NR_024337,uc001hhx.3_5end | |association_with_transcript=215bp_to_NR_024337,uc001hhx.3_5end | ||
|cluster_id=chr1:210407207..210407250,- | |||
|description=CAGE_peak_1_at_C1orf133_5end | |description=CAGE_peak_1_at_C1orf133_5end | ||
|id=chr1:210407207..210407250,- | |id=chr1:210407207..210407250,- | ||
Revision as of 03:30, 28 July 2015
| Short description: | p1@C1orf133 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_C1orf133_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 215bp_to_NR_024337, uc001hhx.3_5end |
| EntrezGene: | 574036 |
| HGNC: | 32019 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@C1orf133 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 6.68e-18 | 253 |
| kidney cell | 1.34e-12 | 17 |
| kidney epithelial cell | 1.34e-12 | 17 |
| epithelial cell of nephron | 6.53e-12 | 15 |
| kidney cortical cell | 1.07e-09 | 12 |
| renal cortical epithelial cell | 1.07e-09 | 12 |
| kidney tubule cell | 1.18e-08 | 10 |
| nephron tubule epithelial cell | 1.18e-08 | 10 |
| embryonic cell | 5.07e-08 | 250 |
| meso-epithelial cell | 8.12e-08 | 45 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| renal system | 5.67e-13 | 48 |
| epithelial tube | 6.38e-13 | 117 |
| urinary system structure | 9.60e-13 | 47 |
| nephron epithelium | 6.53e-12 | 15 |
| renal tubule | 6.53e-12 | 15 |
| nephron tubule | 6.53e-12 | 15 |
| nephron | 6.53e-12 | 15 |
| uriniferous tubule | 6.53e-12 | 15 |
| nephrogenic mesenchyme | 6.53e-12 | 15 |
| excretory tube | 7.15e-12 | 16 |
Showing 1 to 10 of 42 entries
