FFCP PHASE1:Hg19::chr1:33219575..33219586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=57648 | |EntrezGene=entrezgene:57648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29301 | |HGNC=HGNC:29301 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000468130_5end | |association_with_transcript=-33bp_to_ENST00000468130_5end | ||
|cluster_id=chr1:33219575..33219586,+ | |||
|coexpression_cluster_id=C3971 | |coexpression_cluster_id=C3971 | ||
|description=CAGE_peak_4_at_KIAA1522_5end | |description=CAGE_peak_4_at_KIAA1522_5end |
Revision as of 07:23, 28 July 2015
Short description: | p4@KIAA1522 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KIAA1522_5end |
Coexpression cluster: | C3971_Mast_breast_lung_Wilms_salivary_mesothelioma_oral |
Association with transcript: | -33bp_to_ENST00000468130_5end |
EntrezGene: | 57648 |
HGNC: | 29301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@KIAA1522 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.07e-19 | 253 |
endo-epithelial cell | 1.49e-13 | 42 |
endodermal cell | 3.03e-09 | 58 |
respiratory epithelial cell | 2.66e-08 | 13 |
squamous epithelial cell | 8.52e-08 | 63 |
epithelial cell of tracheobronchial tree | 3.99e-07 | 9 |
epithelial cell of lower respiratory tract | 3.99e-07 | 9 |
endocrine cell | 5.42e-07 | 9 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.39e-17 | 22 |
neocortex | 6.04e-16 | 20 |
cerebral hemisphere | 9.03e-15 | 32 |
cerebral cortex | 2.80e-14 | 25 |
pallium | 2.80e-14 | 25 |
telencephalon | 1.88e-13 | 34 |
regional part of telencephalon | 2.88e-13 | 32 |
brain grey matter | 4.16e-13 | 34 |
gray matter | 4.16e-13 | 34 |
regional part of forebrain | 7.42e-11 | 41 |
Showing 1 to 10 of 34 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.29e-14 | 106 |
cell type cancer | 9.30e-12 | 143 |
squamous cell carcinoma | 1.29e-09 | 14 |
adenocarcinoma | 1.16e-08 | 25 |
Showing 1 to 4 of 4 entries