FFCP PHASE1:Hg19::chr5:138725012..138725016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:138725012..138725016,- | |||
|coexpression_cluster_id=C2805 | |coexpression_cluster_id=C2805 | ||
|description=CAGE_peak_at_chr5:138725012..138725016,- | |description=CAGE_peak_at_chr5:138725012..138725016,- |
Latest revision as of 10:22, 30 July 2015
Short description: | p@chr5:138725012..138725016, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:138725012..138725016, - |
Coexpression cluster: | C2805_Hodgkin_chronic_thymus_b_Burkitt_plasma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr5:138725012..138725016- |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.12e-22 | 3 |
lymphocyte of B lineage | 1.92e-11 | 24 |
pro-B cell | 1.92e-11 | 24 |
lymphocyte | 3.92e-11 | 53 |
common lymphoid progenitor | 3.92e-11 | 53 |
leukocyte | 4.34e-09 | 136 |
lymphoid lineage restricted progenitor cell | 4.38e-08 | 52 |
hematopoietic stem cell | 3.26e-07 | 168 |
dendritic cell | 7.15e-07 | 10 |
hematopoietic cell | 8.32e-07 | 177 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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tonsil | 1.70e-17 | 1 |
mucosa-associated lymphoid tissue | 1.70e-17 | 1 |
lymphoid tissue | 1.70e-17 | 1 |
tonsillar ring | 1.70e-17 | 1 |
chordate pharynx | 1.47e-07 | 10 |
pharyngeal region of foregut | 1.47e-07 | 10 |
pharynx | 5.98e-07 | 11 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.22e-17 | 1 |
lymphoma | 1.47e-07 | 10 |
Showing 1 to 2 of 2 entries