FFCP PHASE1:Hg19::chrX:103294483..103294530,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=286436 | |EntrezGene=entrezgene:286436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=27867 | |HGNC=HGNC:27867 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000355016,NM_001164416,uc004els.1_5end | |association_with_transcript=0bp_to_ENST00000355016,NM_001164416,uc004els.1_5end | ||
|cluster_id=chrX:103294483..103294530,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_H2BFM_5end | |description=CAGE_peak_1_at_H2BFM_5end | ||
Revision as of 04:45, 1 August 2015
| Short description: | p1@H2BFM |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_H2BFM_5end |
| Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
| Association with transcript: | 0bp_to_ENST00000355016, NM_001164416, uc004els.1_5end |
| EntrezGene: | 286436 |
| HGNC: | 27867 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@H2BFM |
|---|
0
1
2
3
4
5
6
7
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| testis | 1.11e-25 | 8 |
| male reproductive organ | 5.14e-19 | 11 |
| gonad | 1.69e-10 | 21 |
| indifferent external genitalia | 1.69e-10 | 21 |
| indifferent gonad | 1.69e-10 | 21 |
| gonad primordium | 1.69e-10 | 21 |
| external genitalia | 4.53e-10 | 22 |
| male organism | 4.53e-10 | 22 |
| male reproductive system | 4.53e-10 | 22 |
Showing 1 to 9 of 9 entries
