FFCP PHASE1:Mm9::chr8:46744257..46744268,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=234214|HGNC=|MCL_coexpression_id=1531|UniProt=D3Z080,D3Z203|association_with_transcript=99bp_to_ENSMUST00000132139,ENSMUST00000143820_5end|description=CAGE_peak_16_at_Sorbs2_5end|id=chr8:46744257..46744268,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!1.12e-14!33;UBERON:0007100!2.52e-12!18;UBERON:0000948!2.52e-12!18;UBERON:0005498!2.52e-12!18;UBERON:0004140!2.52e-12!18;UBERON:0009881!2.52e-12!18;UBERON:0004141!2.52e-12!18;UBERON:0003084!2.52e-12!18;UBERON:0007005!2.52e-12!18;UBERON:0004139!2.52e-12!18;UBERON:0004291!2.52e-12!18;UBERON:0003103!2.53e-12!43;UBERON:0004535!3.15e-10!23;UBERON:0001009!3.15e-10!23;UBERON:0000945!5.55e-07!16;UBERON:0010039!5.55e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.08e-24,33;UBERON:0007100,6.89e-24,18;UBERON:0000948,6.89e-24,18;UBERON:0005498,6.89e-24,18;UBERON:0004140,6.89e-24,18;UBERON:0009881,6.89e-24,18;UBERON:0004141,6.89e-24,18;UBERON:0003084,6.89e-24,18;UBERON:0007005,6.89e-24,18;UBERON:0004139,6.89e-24,18;UBERON:0004291,6.89e-24,18;UBERON:0004535,3.03e-22,23;UBERON:0001009,3.03e-22,23;UBERON:0003103,2.42e-21,43;UBERON:0003081,9.58e-09,87;UBERON:0003914,3.09e-08,47;UBERON:0000926,4.10e-08,120;UBERON:0004120,4.10e-08,120;UBERON:0006603,4.10e-08,120;UBERON:0000161,1.58e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,1.94429899074283,0,0,0,0,0,1.02903774414379,6.87680255853016,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0,0,0,0,0.763991238884051,0,0.142371680799103,0,0,0,1.73918693221007,0,0,0,0,0,0.280888840263504,1.53387290320252,0.519572009205738,0.35333957451034,0,0,0,0,2.38140145112336,2.78695852022608,1.51657333504435,0.22836775943812,0.517875767294343,1.33597925158342,0,0,0.230615497256059,0.150722640552623,0,0.502666365318702,0.988779870937496,1.15679485535929,0,0.485300549842228,1.10420759230197,0.969750506270444,1.86391761218122,0.292780797011547,0.209446706813455,0.766371165625774,0,0,0,1.04853447583376,0,0,0.695297280769106,0.255715457330331,1.0389402227978,0,0.509196819251581,0.373220911830279,0.252722758433675,1.68353484709179,0.260240885925407,0,0,0.150704817835715,0.476255494059295,0.2562274405697,0.281105173679186,0.776110112217047,0,1.13463648100692,0.175951124163949,0.657587197282725,0.556094498451196,1.0447564995665,0.823128545631774,0,0,0,0,5.59239585845855,2.11073453982987,2.70093092191522,2.13070262026689,1.77087808572663,1.3884040159864,0.697601834251224,1.3413670069981,1.63471479314037,1.97471819896177,1.47750717671186,1.86458261955468,1.02339991197733,3.29325172936576,2.81833479396781,0.420579897128254,0.308713837137853,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0.898819408654221,0.648414149624083,0.995706366271836,0,0.228497025219458,0,0,0.581857461502877,0.350679099451593,1.45444035385792,1.18088118383682,1.255989822731,1.1105744752962,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0.690739927463582,0.723245292907558,0,0,0,0,1.28440471990234,0.820481806145422,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0.642642632843614,0.99358059645788,0,0.162886959353576,1.31976098378028,1.32745138339963,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,1.05418608574999,1.03135543248187,0.340439605753788,0.540183282093931,0,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,14.54964589995,2.75381692122966,1.7642271844397,0.32977250588296,0.161464426695906,0.241251699712623,0,0,0,0.927126510052548,0.854354403989263,1.44470807574256,3.1483069652851,2.0720530270516,0.683471138605126,0.915112692826091,0,0,0,3.81868247206045,0.316335993581135,0.609958401380546,0.648032044930808,0.418176592028937,0.655087691238533,0.809186078308924,1.98368293740806,4.71160695571253,0.388844919875379,2.4853572523477,0,0,0,0,0.129159823477731,0,0.352071715937262,0.39061315453185,0,0,0.864090018773596,0,0,0,0,0,0.198681354781265,0,0,0.201932899896295,0,0,0.0974578807397524,0,0.116876902181569,1.13365191807606,0,0,0,1.15913756419314,9.57180624801028,0.73260649706906,1.07184189539533,1.50471631210609,0,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,0.103787347584177,0,0.512200817262403,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0.749132059759059,0.576226371643824,0.516919220600519,0.952587382566147,0.231768651889711,0.578727661391115,0.824171801606613,0.883193520806384,0.685738504770831,0.354951612318675,0,0.726732083161643,0.470546902076653,0.676916863133412,0.914639864363863,0.526139422875686,0.679020569229309,0,0.355905054372522,0.492522411877817,1.22769312950907,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0.441182838239031,0|short_description=p16@Sorbs2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:234214 | |||
|HGNC= | |||
|MCL_coexpression_id=1531 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z080,uniprot:D3Z203 | |||
|association_with_transcript=99bp_to_ENSMUST00000132139,ENSMUST00000143820_5end | |||
|cluster_id=chr8:46744257..46744268,+ | |||
|description=CAGE_peak_16_at_Sorbs2_5end | |||
|id=chr8:46744257..46744268,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.12e-14!33;UBERON:0007100!2.52e-12!18;UBERON:0000948!2.52e-12!18;UBERON:0005498!2.52e-12!18;UBERON:0004140!2.52e-12!18;UBERON:0009881!2.52e-12!18;UBERON:0004141!2.52e-12!18;UBERON:0003084!2.52e-12!18;UBERON:0007005!2.52e-12!18;UBERON:0004139!2.52e-12!18;UBERON:0004291!2.52e-12!18;UBERON:0003103!2.53e-12!43;UBERON:0004535!3.15e-10!23;UBERON:0001009!3.15e-10!23;UBERON:0000945!5.55e-07!16;UBERON:0010039!5.55e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.08e-24,33;UBERON:0007100,6.89e-24,18;UBERON:0000948,6.89e-24,18;UBERON:0005498,6.89e-24,18;UBERON:0004140,6.89e-24,18;UBERON:0009881,6.89e-24,18;UBERON:0004141,6.89e-24,18;UBERON:0003084,6.89e-24,18;UBERON:0007005,6.89e-24,18;UBERON:0004139,6.89e-24,18;UBERON:0004291,6.89e-24,18;UBERON:0004535,3.03e-22,23;UBERON:0001009,3.03e-22,23;UBERON:0003103,2.42e-21,43;UBERON:0003081,9.58e-09,87;UBERON:0003914,3.09e-08,47;UBERON:0000926,4.10e-08,120;UBERON:0004120,4.10e-08,120;UBERON:0006603,4.10e-08,120;UBERON:0000161,1.58e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,1.94429899074283,0,0,0,0,0,1.02903774414379,6.87680255853016,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0,0,0,0,0.763991238884051,0,0.142371680799103,0,0,0,1.73918693221007,0,0,0,0,0,0.280888840263504,1.53387290320252,0.519572009205738,0.35333957451034,0,0,0,0,2.38140145112336,2.78695852022608,1.51657333504435,0.22836775943812,0.517875767294343,1.33597925158342,0,0,0.230615497256059,0.150722640552623,0,0.502666365318702,0.988779870937496,1.15679485535929,0,0.485300549842228,1.10420759230197,0.969750506270444,1.86391761218122,0.292780797011547,0.209446706813455,0.766371165625774,0,0,0,1.04853447583376,0,0,0.695297280769106,0.255715457330331,1.0389402227978,0,0.509196819251581,0.373220911830279,0.252722758433675,1.68353484709179,0.260240885925407,0,0,0.150704817835715,0.476255494059295,0.2562274405697,0.281105173679186,0.776110112217047,0,1.13463648100692,0.175951124163949,0.657587197282725,0.556094498451196,1.0447564995665,0.823128545631774,0,0,0,0,5.59239585845855,2.11073453982987,2.70093092191522,2.13070262026689,1.77087808572663,1.3884040159864,0.697601834251224,1.3413670069981,1.63471479314037,1.97471819896177,1.47750717671186,1.86458261955468,1.02339991197733,3.29325172936576,2.81833479396781,0.420579897128254,0.308713837137853,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0.898819408654221,0.648414149624083,0.995706366271836,0,0.228497025219458,0,0,0.581857461502877,0.350679099451593,1.45444035385792,1.18088118383682,1.255989822731,1.1105744752962,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0.690739927463582,0.723245292907558,0,0,0,0,1.28440471990234,0.820481806145422,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0.642642632843614,0.99358059645788,0,0.162886959353576,1.31976098378028,1.32745138339963,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,1.05418608574999,1.03135543248187,0.340439605753788,0.540183282093931,0,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,14.54964589995,2.75381692122966,1.7642271844397,0.32977250588296,0.161464426695906,0.241251699712623,0,0,0,0.927126510052548,0.854354403989263,1.44470807574256,3.1483069652851,2.0720530270516,0.683471138605126,0.915112692826091,0,0,0,3.81868247206045,0.316335993581135,0.609958401380546,0.648032044930808,0.418176592028937,0.655087691238533,0.809186078308924,1.98368293740806,4.71160695571253,0.388844919875379,2.4853572523477,0,0,0,0,0.129159823477731,0,0.352071715937262,0.39061315453185,0,0,0.864090018773596,0,0,0,0,0,0.198681354781265,0,0,0.201932899896295,0,0,0.0974578807397524,0,0.116876902181569,1.13365191807606,0,0,0,1.15913756419314,9.57180624801028,0.73260649706906,1.07184189539533,1.50471631210609,0,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,0.103787347584177,0,0.512200817262403,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0.749132059759059,0.576226371643824,0.516919220600519,0.952587382566147,0.231768651889711,0.578727661391115,0.824171801606613,0.883193520806384,0.685738504770831,0.354951612318675,0,0.726732083161643,0.470546902076653,0.676916863133412,0.914639864363863,0.526139422875686,0.679020569229309,0,0.355905054372522,0.492522411877817,1.22769312950907,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0.441182838239031,0 | |||
|short_description=p16@Sorbs2 | |||
}} |
Revision as of 20:23, 3 August 2015
Short description: | p16@Sorbs2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Sorbs2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1531 |
Association with transcript: | 99bp_to_ENSMUST00000132139, ENSMUST00000143820_5end |
EntrezGene: | 234214 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 2.08e-24 | 33 |
primary circulatory organ | 6.89e-24 | 18 |
heart | 6.89e-24 | 18 |
primitive heart tube | 6.89e-24 | 18 |
primary heart field | 6.89e-24 | 18 |
anterior lateral plate mesoderm | 6.89e-24 | 18 |
heart tube | 6.89e-24 | 18 |
heart primordium | 6.89e-24 | 18 |
cardiac mesoderm | 6.89e-24 | 18 |
cardiogenic plate | 6.89e-24 | 18 |
heart rudiment | 6.89e-24 | 18 |
cardiovascular system | 3.03e-22 | 23 |
circulatory system | 3.03e-22 | 23 |
compound organ | 2.42e-21 | 43 |
lateral plate mesoderm | 9.58e-09 | 87 |
epithelial tube | 3.09e-08 | 47 |
mesoderm | 4.10e-08 | 120 |
mesoderm-derived structure | 4.10e-08 | 120 |
presumptive mesoderm | 4.10e-08 | 120 |
orifice | 1.58e-07 | 5 |