FFCP PHASE1:Mm9::chr10:115580966..115580978,+: Difference between revisions
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{{FFCP|EntrezGene=19279|HGNC=|MCL_coexpression_id=30|UniProt=Q62132|association_with_transcript=7bp_to_ENSMUST00000105271_5end|description=CAGE_peak_12_at_Ptprr_5end|id=chr10:115580966..115580978,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!2.53e-18!6;UBERON:0004733!1.75e-12!6;UBERON:0004732!1.75e-12!6;UBERON:0002028!1.75e-12!6;UBERON:0007277!1.75e-12!6;UBERON:0002950!2.14e-10!4;UBERON:0001891!2.14e-10!4;UBERON:0009616!2.14e-10!4;UBERON:0001896!5.51e-10!2;UBERON:0005290!5.51e-10!2;UBERON:0010096!5.51e-10!2;UBERON:0003076!2.71e-09!12;UBERON:0003057!2.71e-09!12;UBERON:0000033!5.48e-08!63;UBERON:0000073!1.28e-07!75;UBERON:0001016!1.28e-07!75;UBERON:0002616!2.03e-07!49;UBERON:0000955!3.07e-07!50;UBERON:0006238!3.07e-07!50;UBERON:0001049!6.38e-07!52;UBERON:0005068!6.38e-07!52;UBERON:0006241!6.38e-07!52;UBERON:0007135!6.38e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.54e-44,4;UBERON:0002680,4.54e-44,4;UBERON:0001895,4.54e-44,4;UBERON:0010092,4.54e-44,4;UBERON:0006215,4.54e-44,4;UBERON:0004733,6.66e-30,6;UBERON:0004732,6.66e-30,6;UBERON:0002028,6.66e-30,6;UBERON:0007277,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.517382241612,13.823482649688,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@Ptprr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19279 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q62132 | |||
|association_with_transcript=7bp_to_ENSMUST00000105271_5end | |||
|cluster_id=chr10:115580966..115580978,+ | |||
|description=CAGE_peak_12_at_Ptprr_5end | |||
|id=chr10:115580966..115580978,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!2.53e-18!6;UBERON:0004733!1.75e-12!6;UBERON:0004732!1.75e-12!6;UBERON:0002028!1.75e-12!6;UBERON:0007277!1.75e-12!6;UBERON:0002950!2.14e-10!4;UBERON:0001891!2.14e-10!4;UBERON:0009616!2.14e-10!4;UBERON:0001896!5.51e-10!2;UBERON:0005290!5.51e-10!2;UBERON:0010096!5.51e-10!2;UBERON:0003076!2.71e-09!12;UBERON:0003057!2.71e-09!12;UBERON:0000033!5.48e-08!63;UBERON:0000073!1.28e-07!75;UBERON:0001016!1.28e-07!75;UBERON:0002616!2.03e-07!49;UBERON:0000955!3.07e-07!50;UBERON:0006238!3.07e-07!50;UBERON:0001049!6.38e-07!52;UBERON:0005068!6.38e-07!52;UBERON:0006241!6.38e-07!52;UBERON:0007135!6.38e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.54e-44,4;UBERON:0002680,4.54e-44,4;UBERON:0001895,4.54e-44,4;UBERON:0010092,4.54e-44,4;UBERON:0006215,4.54e-44,4;UBERON:0004733,6.66e-30,6;UBERON:0004732,6.66e-30,6;UBERON:0002028,6.66e-30,6;UBERON:0007277,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.517382241612,13.823482649688,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@Ptprr | |||
}} |
Revision as of 21:47, 3 August 2015
Short description: | p12@Ptprr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Ptprr_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 7bp_to_ENSMUST00000105271_5end |
EntrezGene: | 19279 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.54e-44 | 4 |
regional part of metencephalon | 4.54e-44 | 4 |
metencephalon | 4.54e-44 | 4 |
future metencephalon | 4.54e-44 | 4 |
rhombic lip | 4.54e-44 | 4 |
segmental subdivision of hindbrain | 6.66e-30 | 6 |
segmental subdivision of nervous system | 6.66e-30 | 6 |
hindbrain | 6.66e-30 | 6 |
presumptive hindbrain | 6.66e-30 | 6 |
posterior neural tube | 1.13e-15 | 12 |
chordal neural plate | 1.13e-15 | 12 |