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FFCP PHASE1:Mm9::chr5:138362840..138362856,-: Difference between revisions

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{{FFCP|EntrezGene=13113|HGNC=|MCL_coexpression_id=74|UniProt=Q64464,Q3UW87|association_with_transcript=0bp_to_ENSMUST00000031741,NM_007819,uc009aef.2_5end|description=CAGE_peak_1_at_Cyp3a13_5end|id=chr5:138362840..138362856,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,3.66e-08,25;CL:0002563,1.93e-07,9;CL:0002251,1.93e-07,9;CL:0000223,2.29e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!2.58e-24!128;UBERON:0001555!2.58e-24!128;UBERON:0007026!2.58e-24!128;UBERON:0004119!9.01e-24!130;UBERON:0000925!9.01e-24!130;UBERON:0006595!9.01e-24!130;UBERON:0004921!5.84e-23!126;UBERON:0004185!5.84e-23!126;UBERON:0005409!5.11e-20!59;UBERON:0000160!2.31e-19!43;UBERON:0009854!6.26e-12!23;UBERON:0009856!6.26e-12!23;UBERON:0002107!2.44e-11!22;UBERON:0007499!2.44e-11!22;UBERON:0006925!2.44e-11!22;UBERON:0009497!2.44e-11!22;UBERON:0000015!2.44e-11!22;UBERON:0002423!2.44e-11!22;UBERON:0006235!2.44e-11!22;UBERON:0008835!2.44e-11!22;UBERON:0003894!2.44e-11!22;UBERON:0004161!2.44e-11!22;UBERON:0008836!2.44e-11!22;UBERON:0000344!5.11e-10!15;UBERON:0002365!2.26e-09!25;UBERON:0002330!2.26e-09!25;UBERON:0001242!9.21e-09!13;UBERON:0000060!9.21e-09!13;UBERON:0001262!9.21e-09!13;UBERON:0004786!9.21e-09!13;UBERON:0000077!3.48e-07!97;UBERON:0005911!3.78e-07!69;UBERON:0001041!4.11e-07!92;UBERON:0003929!8.55e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.66e-22,31;UBERON:0005409,1.70e-21,47;UBERON:0001007,1.42e-20,116;UBERON:0001555,1.42e-20,116;UBERON:0007026,1.42e-20,116;UBERON:0004119,8.88e-20,118;UBERON:0000925,8.88e-20,118;UBERON:0006595,8.88e-20,118;UBERON:0004921,3.63e-19,114;UBERON:0009854,1.55e-13,23;UBERON:0009856,1.55e-13,23;UBERON:0002107,8.10e-13,22;UBERON:0007499,8.10e-13,22;UBERON:0006925,8.10e-13,22;UBERON:0009497,8.10e-13,22;UBERON:0000015,8.10e-13,22;UBERON:0002423,8.10e-13,22;UBERON:0006235,8.10e-13,22;UBERON:0008835,8.10e-13,22;UBERON:0003894,8.10e-13,22;UBERON:0004161,8.10e-13,22;UBERON:0008836,8.10e-13,22;UBERON:0000344,6.58e-12,15;UBERON:0001242,2.25e-10,13;UBERON:0001262,2.25e-10,13;UBERON:0004786,2.25e-10,13;UBERON:0002365,2.45e-10,25;UBERON:0002330,2.45e-10,25;UBERON:0003350,1.93e-07,9;UBERON:0004808,1.93e-07,9;UBERON:0001277,1.93e-07,9|phase1_expression=0,203.801638061387,207.934652401018,329.685990324445,330.090286034643,34.7510092857612,25.6973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,122.714188282543,99.3342187020846,132.64758371057,120.182596928382,108.812972506374,66.5081968097309,93.2511480111744,52.3284005146519,0,0,0,7.22129049378186,13.6312409193964,11.4334839506927,0,0,0,0,0,0,0.377690453926732,1.01376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.73918693221007,112.715527884562,80.2366173775146,100.924496836272,314.491786044672,221.325282226084,30.6168835887219,0,0,0,0,0,0,0,1.08245520505607,0,2.02209778005913,97.9697687989535,0,1.63286352971307,0.173485326766136,0.608930956624282,1.15307748628029,0.452167921657868,5.99702406392095,1.63366568728578,10.8765785803125,0.86759614151947,0,0,0.220841518460394,0,89.4680453846986,0,0,429.678766860851,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,1.89397670297827,0,0,0,0.452114453507145,0.136072998302656,0.2562274405697,0,1.03481348295606,0,0,0,0,0,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0.439100230582101,0.536825675041487,0,0,2549.18091072,153.645779231519,0.853153002140936,2.78684006232526,10.6959992897337,42.1518566462786,50.7021939966304,67.7203228960711,433.719562251684,166.345944271251,59.8177796944641,76.3992852638019,71.1618917984788,364.02186050496,427.953338751895,603.995481780496,0,0.228497025219458,0,0,0,0.210407459670956,0.822074982615345,0.147610147979602,0,0,214.038796756921,0.333690211432188,1.37591296579242,2.69834534861824,4.46292267054706,4.10001171579109,10.4396599230382,28.1942214701794,207.04668459172,57.108773943121,73.3217853289508,87.0809817544298,63.9677229884849,102.041866690633,118.043498097418,381.13038187706,2.77129785249907,0,0,0.509235257325564,0,1.34005005953453,1.42826184531608,1.95133647857799,0.788175720530955,0.664394068946325,0.478364305972461,3.4411296090305,1.03610989119537,2.89298117163023,0,0,0,0.275936746304732,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.567760340833074,0.712262414669021,0.162886959353576,0,9.2921596837974,0.728341908464944,2.11626489875326,0.943025398779491,0.295301892880773,1.22974059177571,29.4608254211772,1.45413491791002,2.13898427030833,4.10847785316561,0,3.09406629744561,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,2.14352128823924,3.71368181400583,2.23157822234177,1.19372344003136,0.492422699235184,293.81268332289,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,30.5494597764836,1.10717597753397,2.43983360552218,6.37231510848627,11.7089445768102,24.0198820120795,17.5323650300267,19.8368293740806,18.8464278228501,225.53005352772,0,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0,0,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0.0762068066549998,0.806609481094724,0.38983152295901,0.577271049841977,0.116876902181569,9.74940649545409,0,0,0,0.386379188064381,0.563047426353546,0.549454872801795,17.7925754635625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.972426868273176,0,2.20612210140017,4.88942801163553,3.09052585858341,7.06022261101994,4.04315538822076,3.8021894983536,4.90428487603798,5.80577346313271,5.57018825922363,4.7671439233159,6.66811167796303,3.82418275618023,5.40145817298374,6.59337441285291,8.09594060739185,4.4573002810104,5.32427418478012,5.00715998889374,5.0871245821315,5.45834406408918,4.14611578669215,3.47563148458268,5.5244639401947,5.83957689537206,3.36685362994643,4.50813068871862,3.25064791839359,3.6830793885272,5.11291575913688,3.2794123866794,0.249810577937946,9.35726433781634,21.2722343507815,2.29545998482612,0.220591419119515,0.695603506861264|short_description=p1@Cyp3a13}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:13113
|HGNC=
|MCL_coexpression_id=74
|TSSclassifier=NA
|UniProt=uniprot:Q64464,uniprot:Q3UW87
|association_with_transcript=0bp_to_ENSMUST00000031741,NM_007819,uc009aef.2_5end
|cluster_id=chr5:138362840..138362856,-
|description=CAGE_peak_1_at_Cyp3a13_5end
|id=chr5:138362840..138362856,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,3.66e-08,25;CL:0002563,1.93e-07,9;CL:0002251,1.93e-07,9;CL:0000223,2.29e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!2.58e-24!128;UBERON:0001555!2.58e-24!128;UBERON:0007026!2.58e-24!128;UBERON:0004119!9.01e-24!130;UBERON:0000925!9.01e-24!130;UBERON:0006595!9.01e-24!130;UBERON:0004921!5.84e-23!126;UBERON:0004185!5.84e-23!126;UBERON:0005409!5.11e-20!59;UBERON:0000160!2.31e-19!43;UBERON:0009854!6.26e-12!23;UBERON:0009856!6.26e-12!23;UBERON:0002107!2.44e-11!22;UBERON:0007499!2.44e-11!22;UBERON:0006925!2.44e-11!22;UBERON:0009497!2.44e-11!22;UBERON:0000015!2.44e-11!22;UBERON:0002423!2.44e-11!22;UBERON:0006235!2.44e-11!22;UBERON:0008835!2.44e-11!22;UBERON:0003894!2.44e-11!22;UBERON:0004161!2.44e-11!22;UBERON:0008836!2.44e-11!22;UBERON:0000344!5.11e-10!15;UBERON:0002365!2.26e-09!25;UBERON:0002330!2.26e-09!25;UBERON:0001242!9.21e-09!13;UBERON:0000060!9.21e-09!13;UBERON:0001262!9.21e-09!13;UBERON:0004786!9.21e-09!13;UBERON:0000077!3.48e-07!97;UBERON:0005911!3.78e-07!69;UBERON:0001041!4.11e-07!92;UBERON:0003929!8.55e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.66e-22,31;UBERON:0005409,1.70e-21,47;UBERON:0001007,1.42e-20,116;UBERON:0001555,1.42e-20,116;UBERON:0007026,1.42e-20,116;UBERON:0004119,8.88e-20,118;UBERON:0000925,8.88e-20,118;UBERON:0006595,8.88e-20,118;UBERON:0004921,3.63e-19,114;UBERON:0009854,1.55e-13,23;UBERON:0009856,1.55e-13,23;UBERON:0002107,8.10e-13,22;UBERON:0007499,8.10e-13,22;UBERON:0006925,8.10e-13,22;UBERON:0009497,8.10e-13,22;UBERON:0000015,8.10e-13,22;UBERON:0002423,8.10e-13,22;UBERON:0006235,8.10e-13,22;UBERON:0008835,8.10e-13,22;UBERON:0003894,8.10e-13,22;UBERON:0004161,8.10e-13,22;UBERON:0008836,8.10e-13,22;UBERON:0000344,6.58e-12,15;UBERON:0001242,2.25e-10,13;UBERON:0001262,2.25e-10,13;UBERON:0004786,2.25e-10,13;UBERON:0002365,2.45e-10,25;UBERON:0002330,2.45e-10,25;UBERON:0003350,1.93e-07,9;UBERON:0004808,1.93e-07,9;UBERON:0001277,1.93e-07,9
|phase1_expression=0,203.801638061387,207.934652401018,329.685990324445,330.090286034643,34.7510092857612,25.6973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,122.714188282543,99.3342187020846,132.64758371057,120.182596928382,108.812972506374,66.5081968097309,93.2511480111744,52.3284005146519,0,0,0,7.22129049378186,13.6312409193964,11.4334839506927,0,0,0,0,0,0,0.377690453926732,1.01376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.73918693221007,112.715527884562,80.2366173775146,100.924496836272,314.491786044672,221.325282226084,30.6168835887219,0,0,0,0,0,0,0,1.08245520505607,0,2.02209778005913,97.9697687989535,0,1.63286352971307,0.173485326766136,0.608930956624282,1.15307748628029,0.452167921657868,5.99702406392095,1.63366568728578,10.8765785803125,0.86759614151947,0,0,0.220841518460394,0,89.4680453846986,0,0,429.678766860851,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,1.89397670297827,0,0,0,0.452114453507145,0.136072998302656,0.2562274405697,0,1.03481348295606,0,0,0,0,0,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0.439100230582101,0.536825675041487,0,0,2549.18091072,153.645779231519,0.853153002140936,2.78684006232526,10.6959992897337,42.1518566462786,50.7021939966304,67.7203228960711,433.719562251684,166.345944271251,59.8177796944641,76.3992852638019,71.1618917984788,364.02186050496,427.953338751895,603.995481780496,0,0.228497025219458,0,0,0,0.210407459670956,0.822074982615345,0.147610147979602,0,0,214.038796756921,0.333690211432188,1.37591296579242,2.69834534861824,4.46292267054706,4.10001171579109,10.4396599230382,28.1942214701794,207.04668459172,57.108773943121,73.3217853289508,87.0809817544298,63.9677229884849,102.041866690633,118.043498097418,381.13038187706,2.77129785249907,0,0,0.509235257325564,0,1.34005005953453,1.42826184531608,1.95133647857799,0.788175720530955,0.664394068946325,0.478364305972461,3.4411296090305,1.03610989119537,2.89298117163023,0,0,0,0.275936746304732,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.567760340833074,0.712262414669021,0.162886959353576,0,9.2921596837974,0.728341908464944,2.11626489875326,0.943025398779491,0.295301892880773,1.22974059177571,29.4608254211772,1.45413491791002,2.13898427030833,4.10847785316561,0,3.09406629744561,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,2.14352128823924,3.71368181400583,2.23157822234177,1.19372344003136,0.492422699235184,293.81268332289,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,30.5494597764836,1.10717597753397,2.43983360552218,6.37231510848627,11.7089445768102,24.0198820120795,17.5323650300267,19.8368293740806,18.8464278228501,225.53005352772,0,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0,0,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0.0762068066549998,0.806609481094724,0.38983152295901,0.577271049841977,0.116876902181569,9.74940649545409,0,0,0,0.386379188064381,0.563047426353546,0.549454872801795,17.7925754635625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.972426868273176,0,2.20612210140017,4.88942801163553,3.09052585858341,7.06022261101994,4.04315538822076,3.8021894983536,4.90428487603798,5.80577346313271,5.57018825922363,4.7671439233159,6.66811167796303,3.82418275618023,5.40145817298374,6.59337441285291,8.09594060739185,4.4573002810104,5.32427418478012,5.00715998889374,5.0871245821315,5.45834406408918,4.14611578669215,3.47563148458268,5.5244639401947,5.83957689537206,3.36685362994643,4.50813068871862,3.25064791839359,3.6830793885272,5.11291575913688,3.2794123866794,0.249810577937946,9.35726433781634,21.2722343507815,2.29545998482612,0.220591419119515,0.695603506861264
|short_description=p1@Cyp3a13
}}

Revision as of 22:05, 3 August 2015

Short description:p1@Cyp3a13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cyp3a13_5end
Coexpression cluster:MCL_coexpression_mm9:74
Association with transcript: 0bp_to_ENSMUST00000031741, NM_007819, uc009aef.2_5end
EntrezGene:13113
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Cyp3a13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5203.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6207.93
CD326+ enterocyte, pool1.CNhs13542.11848-124I3329.69
CD326+ enterocyte, pool2.CNhs13197.11849-124I4330.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.75
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1122.71
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D299.33
GP2+ M cell, pool1.CNhs13228.11845-124H9132.65
GP2+ M cell, pool2.CNhs13231.11846-124I1120.18
GP2+ M cell, pool3.CNhs13240.11847-124I2108.81
Ileum epithelium, pool1.CNhs13199.10252-104B966.51
Ileum epithelium, pool2.CNhs13232.10253-104C193.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C852.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.63
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7112.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C480.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C8100.92
Mouse hepatocyte, donor6.CNhs13090.11822-124F4314.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F6221.33
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A730.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B697.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C16.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A810.88
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H489.47
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H7429.68
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I32549.18
intestine, adult.CNhs10496.178-9A3153.65
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D810.70
intestine, embryo E16.CNhs10585.463-22H442.15
intestine, embryo E17.CNhs10582.482-18D350.70
intestine, embryo E18.CNhs10526.1289-20F767.72
intestine, neonate N00.CNhs11126.644-26D1433.72
intestine, neonate N01.CNhs11192.1322-23E9166.35
intestine, neonate N06.CNhs11102.688-20B859.82
intestine, neonate N07.CNhs11095.720-20F276.40
intestine, neonate N10.CNhs11098.755-23A571.16
intestine, neonate N20.CNhs11187.827-18D1364.02
intestine, neonate N25.CNhs11121.1352-25E3427.95
intestine, neonate N30.CNhs11131.1384-42G1604.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B2214.04
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G428.19
liver, neonate N00.CNhs11117.641-24F4207.05
liver, neonate N03.CNhs11123.1345-25G257.11
liver, neonate N06.CNhs11101.684-20A873.32
liver, neonate N07.CNhs11103.716-20H287.08
liver, neonate N10.CNhs11115.751-24B963.97
liver, neonate N20.CNhs11220.823-25A3102.04
liver, neonate N25.CNhs11198.1368-26H1118.04
liver, neonate N30.CNhs11106.1382-42D1381.13
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G929.46
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H32.23
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I1293.81
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H630.55
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D46.37
stomach, embryo E17.CNhs11006.1035-18D511.71
stomach, embryo E18.CNhs10999.1286-20C624.02
stomach, neonate N03.CNhs11193.1340-24B817.53
stomach, neonate N07.CNhs11210.718-18A919.84
stomach, neonate N25.CNhs11104.1355-25E418.85
stomach, neonate N30.CNhs11134.1386-42I1225.53
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B49.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D517.79
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.11
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C221.27
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell3.66e-0825
intestinal epithelial cell1.93e-079
epithelial cell of alimentary canal1.93e-079
endodermal cell2.29e-0720

Uber anatomy
Ontology termp-valuen
intestine5.66e-2231
gastrointestinal system1.70e-2147
digestive system1.42e-20116
digestive tract1.42e-20116
primitive gut1.42e-20116
endoderm-derived structure8.88e-20118
endoderm8.88e-20118
presumptive endoderm8.88e-20118
subdivision of digestive tract3.63e-19114
digestive tract diverticulum1.55e-1323
sac1.55e-1323
liver8.10e-1322
epithelial sac8.10e-1322
digestive gland8.10e-1322
epithelium of foregut-midgut junction8.10e-1322
anatomical boundary8.10e-1322
hepatobiliary system8.10e-1322
foregut-midgut junction8.10e-1322
hepatic diverticulum8.10e-1322
liver primordium8.10e-1322
septum transversum8.10e-1322
liver bud8.10e-1322
mucosa6.58e-1215
intestinal mucosa2.25e-1013
wall of intestine2.25e-1013
gastrointestinal system mucosa2.25e-1013
exocrine gland2.45e-1025
exocrine system2.45e-1025
epithelium of mucosa1.93e-079
gastrointestinal system epithelium1.93e-079
intestinal epithelium1.93e-079
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