FFCP PHASE1:Mm9::chr19:39384266..39384278,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=128|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:39384266..39384278,+|id=chr19:39384266..39384278,+|ontology_enrichment_celltype=CL:0000181!7.46e-23!5;CL:0000417!7.46e-23!5;CL:0000668!7.46e-23!5;CL:0000412!7.46e-23!5;CL:0000182!7.46e-23!5;CL:0000414!1.50e-10!11;CL:0000057!7.68e-08!1;CL:0000632!7.68e-08!1|ontology_enrichment_celltype_v019_2=CL:0000182,1.35e-26,5;CL:0000057,6.33e-09,1;CL:0000632,6.33e-09,1;CL:0000223,7.01e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.54e-24!22;UBERON:0007499!1.54e-24!22;UBERON:0006925!1.54e-24!22;UBERON:0009497!1.54e-24!22;UBERON:0000015!1.54e-24!22;UBERON:0002423!1.54e-24!22;UBERON:0006235!1.54e-24!22;UBERON:0008835!1.54e-24!22;UBERON:0003894!1.54e-24!22;UBERON:0004161!1.54e-24!22;UBERON:0008836!1.54e-24!22;UBERON:0009854!1.93e-23!23;UBERON:0009856!1.93e-23!23;UBERON:0002365!1.66e-21!25;UBERON:0002330!1.66e-21!25;UBERON:0003914!4.69e-11!47;UBERON:0005256!4.69e-11!47;UBERON:0005172!1.44e-10!49;UBERON:0005173!1.44e-10!49;UBERON:0002417!1.44e-10!49;UBERON:0000916!1.44e-10!49;UBERON:0005057!4.06e-10!51;UBERON:0003929!2.58e-09!55;UBERON:0002368!1.84e-08!60;UBERON:0002530!9.75e-08!65;UBERON:0000490!1.32e-07!66;UBERON:0009569!1.32e-07!66;UBERON:0005911!3.12e-07!69;UBERON:0002405!4.08e-07!70;UBERON:0000949!6.86e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.16e-29,22;UBERON:0007499,6.16e-29,22;UBERON:0006925,6.16e-29,22;UBERON:0009497,6.16e-29,22;UBERON:0000015,6.16e-29,22;UBERON:0002423,6.16e-29,22;UBERON:0006235,6.16e-29,22;UBERON:0008835,6.16e-29,22;UBERON:0003894,6.16e-29,22;UBERON:0004161,6.16e-29,22;UBERON:0008836,6.16e-29,22;UBERON:0009854,1.16e-27,23;UBERON:0009856,1.16e-27,23;UBERON:0002365,2.06e-25,25;UBERON:0002330,2.06e-25,25;UBERON:0005256,6.99e-14,45;UBERON:0003914,2.89e-13,47;UBERON:0005172,1.07e-12,49;UBERON:0005173,1.07e-12,49;UBERON:0002417,1.07e-12,49;UBERON:0000916,1.07e-12,49;UBERON:0003929,3.04e-11,55;UBERON:0002368,2.98e-10,60;UBERON:0003104,4.51e-10,61;UBERON:0009142,4.51e-10,61;UBERON:0002530,2.07e-09,65;UBERON:0000490,2.95e-09,66;UBERON:0009569,2.95e-09,66;UBERON:0005911,8.00e-09,69;UBERON:0000949,2.00e-08,72;UBERON:0005177,1.30e-07,79;UBERON:0001041,1.65e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,10.879541339324,5.39703191637817,26.6408331153544,6.2723764193627,2.24711072210803,0,0,0,0,0,0,0,0,0,0,4.33898742932428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0,0,0,0,0,0,3.78868316920668,2.51156378930677,14.473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:39384266..39384278,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:39384266..39384278,+ | |||
|description=CAGE_peak_at_chr19:39384266..39384278,+ | |||
|id=chr19:39384266..39384278,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.46e-23!5;CL:0000417!7.46e-23!5;CL:0000668!7.46e-23!5;CL:0000412!7.46e-23!5;CL:0000182!7.46e-23!5;CL:0000414!1.50e-10!11;CL:0000057!7.68e-08!1;CL:0000632!7.68e-08!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.35e-26,5;CL:0000057,6.33e-09,1;CL:0000632,6.33e-09,1;CL:0000223,7.01e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.54e-24!22;UBERON:0007499!1.54e-24!22;UBERON:0006925!1.54e-24!22;UBERON:0009497!1.54e-24!22;UBERON:0000015!1.54e-24!22;UBERON:0002423!1.54e-24!22;UBERON:0006235!1.54e-24!22;UBERON:0008835!1.54e-24!22;UBERON:0003894!1.54e-24!22;UBERON:0004161!1.54e-24!22;UBERON:0008836!1.54e-24!22;UBERON:0009854!1.93e-23!23;UBERON:0009856!1.93e-23!23;UBERON:0002365!1.66e-21!25;UBERON:0002330!1.66e-21!25;UBERON:0003914!4.69e-11!47;UBERON:0005256!4.69e-11!47;UBERON:0005172!1.44e-10!49;UBERON:0005173!1.44e-10!49;UBERON:0002417!1.44e-10!49;UBERON:0000916!1.44e-10!49;UBERON:0005057!4.06e-10!51;UBERON:0003929!2.58e-09!55;UBERON:0002368!1.84e-08!60;UBERON:0002530!9.75e-08!65;UBERON:0000490!1.32e-07!66;UBERON:0009569!1.32e-07!66;UBERON:0005911!3.12e-07!69;UBERON:0002405!4.08e-07!70;UBERON:0000949!6.86e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.16e-29,22;UBERON:0007499,6.16e-29,22;UBERON:0006925,6.16e-29,22;UBERON:0009497,6.16e-29,22;UBERON:0000015,6.16e-29,22;UBERON:0002423,6.16e-29,22;UBERON:0006235,6.16e-29,22;UBERON:0008835,6.16e-29,22;UBERON:0003894,6.16e-29,22;UBERON:0004161,6.16e-29,22;UBERON:0008836,6.16e-29,22;UBERON:0009854,1.16e-27,23;UBERON:0009856,1.16e-27,23;UBERON:0002365,2.06e-25,25;UBERON:0002330,2.06e-25,25;UBERON:0005256,6.99e-14,45;UBERON:0003914,2.89e-13,47;UBERON:0005172,1.07e-12,49;UBERON:0005173,1.07e-12,49;UBERON:0002417,1.07e-12,49;UBERON:0000916,1.07e-12,49;UBERON:0003929,3.04e-11,55;UBERON:0002368,2.98e-10,60;UBERON:0003104,4.51e-10,61;UBERON:0009142,4.51e-10,61;UBERON:0002530,2.07e-09,65;UBERON:0000490,2.95e-09,66;UBERON:0009569,2.95e-09,66;UBERON:0005911,8.00e-09,69;UBERON:0000949,2.00e-08,72;UBERON:0005177,1.30e-07,79;UBERON:0001041,1.65e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,10.879541339324,5.39703191637817,26.6408331153544,6.2723764193627,2.24711072210803,0,0,0,0,0,0,0,0,0,0,4.33898742932428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0,0,0,0,0,0,3.78868316920668,2.51156378930677,14.473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:39384266..39384278,+ | |||
}} |
Latest revision as of 01:03, 4 August 2015
Short description: | p@chr19:39384266..39384278, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:39384266..39384278, + |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.35e-26 | 5 |
fibroblast | 6.33e-09 | 1 |
hepatic stellate cell | 6.33e-09 | 1 |
endodermal cell | 7.01e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 6.16e-29 | 22 |
epithelial sac | 6.16e-29 | 22 |
digestive gland | 6.16e-29 | 22 |
epithelium of foregut-midgut junction | 6.16e-29 | 22 |
anatomical boundary | 6.16e-29 | 22 |
hepatobiliary system | 6.16e-29 | 22 |
foregut-midgut junction | 6.16e-29 | 22 |
hepatic diverticulum | 6.16e-29 | 22 |
liver primordium | 6.16e-29 | 22 |
septum transversum | 6.16e-29 | 22 |
liver bud | 6.16e-29 | 22 |
digestive tract diverticulum | 1.16e-27 | 23 |
sac | 1.16e-27 | 23 |
exocrine gland | 2.06e-25 | 25 |
exocrine system | 2.06e-25 | 25 |
trunk mesenchyme | 6.99e-14 | 45 |
epithelial tube | 2.89e-13 | 47 |
abdomen element | 1.07e-12 | 49 |
abdominal segment element | 1.07e-12 | 49 |
abdominal segment of trunk | 1.07e-12 | 49 |
abdomen | 1.07e-12 | 49 |
gut epithelium | 3.04e-11 | 55 |
endocrine gland | 2.98e-10 | 60 |
mesenchyme | 4.51e-10 | 61 |
entire embryonic mesenchyme | 4.51e-10 | 61 |
gland | 2.07e-09 | 65 |
unilaminar epithelium | 2.95e-09 | 66 |
subdivision of trunk | 2.95e-09 | 66 |
endo-epithelium | 8.00e-09 | 69 |
endocrine system | 2.00e-08 | 72 |
trunk region element | 1.30e-07 | 79 |
foregut | 1.65e-07 | 80 |