FFCP PHASE1:Mm9::chr19:40457062..40457090,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:40457062..40457090,-|id=chr19:40457062..40457090,-|ontology_enrichment_celltype=CL:0000107!2.60e-08!9;CL:0000221!1.66e-07!44;CL:0000133!1.66e-07!44;CL:0000055!2.44e-07!50;CL:0002319!5.53e-07!43|ontology_enrichment_celltype_v019_2=CL:0000107,8.88e-35,9;CL:0000221,3.75e-17,44;CL:0000133,3.75e-17,44;CL:0002319,3.49e-15,43;CL:0002321,3.63e-11,70;CL:0000540,2.63e-10,33;CL:0000047,2.63e-10,33;CL:0000031,2.63e-10,33;CL:0000404,2.63e-10,33;CL:0000393,3.51e-10,39;CL:0000211,3.51e-10,39;CL:0000217,1.16e-08,2;CL:0000328,1.16e-08,2;CL:0002573,1.16e-08,2;CL:0002376,1.16e-08,2;CL:0000218,1.16e-08,2;CL:0000692,1.16e-08,2;CL:0002377,1.16e-08,2;CL:0002375,1.16e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!9.23e-10!11;UBERON:0002410!2.60e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.02e-42,11;UBERON:0002410,8.88e-35,9;UBERON:0000011,4.32e-13,3;UBERON:0000013,1.26e-12,3;UBERON:0010313,3.02e-12,3;UBERON:0002342,3.02e-12,3;UBERON:0002005,3.02e-12,3;UBERON:0005428,3.02e-12,3;UBERON:0005062,3.02e-12,3;UBERON:0001016,2.90e-10,75;UBERON:0004121,7.16e-10,95;UBERON:0000924,7.16e-10,95;UBERON:0006601,7.16e-10,95;UBERON:0001017,8.22e-08,73|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0.218025156380447,0.439372365468944,0.194429899074283,1.53985063787899,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0.311068836925433,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0.510749352340751,0.153606533256243,0,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0.589257170947335,0.996601765593721,0.186399445825301,1.74170244666323,2.87171928405785,0,0,0,0,0,0.448026887097336,0.561777680527007,0.340860645156116,0.259786004602869,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0.352766121407114,0.125666591329675,0.741584903203122,0.86759614151947,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.292780797011547,2.51336048176146,0.510914110417183,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.173824320192276,0,0.41557608911912,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0.420883711772948,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.340182495756639,0,0.281105173679186,0,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.697601834251224,0,0.467061369468678,0.493679549740441,0.32833492815819,0.648550476366846,0.730999937126662,0.878200461164203,0.939444931322602,0,0,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0.949058123089023,0.823494773620054,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0.407302655690628,0,0,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0.500535317148282,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,1.89304931649754,1.56175497718655,4.95473814785438,5.73525115086125,5.79276552614225,7.07691326972081,3.23848561339915,4.38383786866968,3.55759000151871,0.321321316421807,0.425820255624806,0,0,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0,0,0,0.469343416127421,0.63549621259146,0.220528398054962,0.49465875882444,0.484393280087717,0.361877549568935,0.477489376012546,0.656563598980245,0.291480836629851,0.18542530201051,0.512612642393558,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0.406638934253697,0,0.418176592028937,0.655087691238533,0.674321731924103,0.495920734352016,0,0.518459893167171,0,0,0.299033092087958,0,0,0,0,0.469428954583016,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0.240390899039938,0,0,0,0.201652370273681,0,0.0962118416403295,0,1.13365191807606,0.443971906748129,0.269141569828427,0.167884616364078,1.15913756419314,0.563047426353546,0.73260649706906,0,0,0,1.38097570952153,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.256100609619477,0.459483751644906,0,0,0,0,0.441596760403192,1.02860775715625,0,0,0.290692833264657,0.282328141245992,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.464810523557898,0.385813221962283,0.249810577937946,0,0.429742108096597,1.53030665655075,0,0.231867835620421|short_description=p@chr19:40457062..40457090,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:40457062..40457090,- | |||
|description=CAGE_peak_at_chr19:40457062..40457090,- | |||
|id=chr19:40457062..40457090,- | |||
|ontology_enrichment_celltype=CL:0000107!2.60e-08!9;CL:0000221!1.66e-07!44;CL:0000133!1.66e-07!44;CL:0000055!2.44e-07!50;CL:0002319!5.53e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.88e-35,9;CL:0000221,3.75e-17,44;CL:0000133,3.75e-17,44;CL:0002319,3.49e-15,43;CL:0002321,3.63e-11,70;CL:0000540,2.63e-10,33;CL:0000047,2.63e-10,33;CL:0000031,2.63e-10,33;CL:0000404,2.63e-10,33;CL:0000393,3.51e-10,39;CL:0000211,3.51e-10,39;CL:0000217,1.16e-08,2;CL:0000328,1.16e-08,2;CL:0002573,1.16e-08,2;CL:0002376,1.16e-08,2;CL:0000218,1.16e-08,2;CL:0000692,1.16e-08,2;CL:0002377,1.16e-08,2;CL:0002375,1.16e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!9.23e-10!11;UBERON:0002410!2.60e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.02e-42,11;UBERON:0002410,8.88e-35,9;UBERON:0000011,4.32e-13,3;UBERON:0000013,1.26e-12,3;UBERON:0010313,3.02e-12,3;UBERON:0002342,3.02e-12,3;UBERON:0002005,3.02e-12,3;UBERON:0005428,3.02e-12,3;UBERON:0005062,3.02e-12,3;UBERON:0001016,2.90e-10,75;UBERON:0004121,7.16e-10,95;UBERON:0000924,7.16e-10,95;UBERON:0006601,7.16e-10,95;UBERON:0001017,8.22e-08,73 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0.218025156380447,0.439372365468944,0.194429899074283,1.53985063787899,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0.311068836925433,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0.510749352340751,0.153606533256243,0,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0.589257170947335,0.996601765593721,0.186399445825301,1.74170244666323,2.87171928405785,0,0,0,0,0,0.448026887097336,0.561777680527007,0.340860645156116,0.259786004602869,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0.352766121407114,0.125666591329675,0.741584903203122,0.86759614151947,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.292780797011547,2.51336048176146,0.510914110417183,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.173824320192276,0,0.41557608911912,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0.420883711772948,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.340182495756639,0,0.281105173679186,0,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.697601834251224,0,0.467061369468678,0.493679549740441,0.32833492815819,0.648550476366846,0.730999937126662,0.878200461164203,0.939444931322602,0,0,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0.949058123089023,0.823494773620054,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0.407302655690628,0,0,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0.500535317148282,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,1.89304931649754,1.56175497718655,4.95473814785438,5.73525115086125,5.79276552614225,7.07691326972081,3.23848561339915,4.38383786866968,3.55759000151871,0.321321316421807,0.425820255624806,0,0,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0,0,0,0.469343416127421,0.63549621259146,0.220528398054962,0.49465875882444,0.484393280087717,0.361877549568935,0.477489376012546,0.656563598980245,0.291480836629851,0.18542530201051,0.512612642393558,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0.406638934253697,0,0.418176592028937,0.655087691238533,0.674321731924103,0.495920734352016,0,0.518459893167171,0,0,0.299033092087958,0,0,0,0,0.469428954583016,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0.240390899039938,0,0,0,0.201652370273681,0,0.0962118416403295,0,1.13365191807606,0.443971906748129,0.269141569828427,0.167884616364078,1.15913756419314,0.563047426353546,0.73260649706906,0,0,0,1.38097570952153,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.256100609619477,0.459483751644906,0,0,0,0,0.441596760403192,1.02860775715625,0,0,0.290692833264657,0.282328141245992,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.464810523557898,0.385813221962283,0.249810577937946,0,0.429742108096597,1.53030665655075,0,0.231867835620421 | |||
|short_description=p@chr19:40457062..40457090,- | |||
}} |
Latest revision as of 01:33, 4 August 2015
Short description: | p@chr19:40457062..40457090, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:40457062..40457090, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.88e-35 | 9 |
ectodermal cell | 3.75e-17 | 44 |
neurectodermal cell | 3.75e-17 | 44 |
neural cell | 3.49e-15 | 43 |
embryonic cell | 3.63e-11 | 70 |
neuron | 2.63e-10 | 33 |
neuronal stem cell | 2.63e-10 | 33 |
neuroblast | 2.63e-10 | 33 |
electrically signaling cell | 2.63e-10 | 33 |
electrically responsive cell | 3.51e-10 | 39 |
electrically active cell | 3.51e-10 | 39 |
insulating cell | 1.16e-08 | 2 |
myelin accumulating cell | 1.16e-08 | 2 |
Schwann cell | 1.16e-08 | 2 |
non-myelinating Schwann cell | 1.16e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 1.16e-08 | 2 |
terminal Schwann cell | 1.16e-08 | 2 |
immature Schwann cell | 1.16e-08 | 2 |
Schwann cell precursor | 1.16e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 6.02e-42 | 11 |
autonomic nervous system | 8.88e-35 | 9 |
parasympathetic nervous system | 4.32e-13 | 3 |
sympathetic nervous system | 1.26e-12 | 3 |
neural crest-derived structure | 3.02e-12 | 3 |
neural crest | 3.02e-12 | 3 |
enteric nervous system | 3.02e-12 | 3 |
vagal neural crest | 3.02e-12 | 3 |
neural fold | 3.02e-12 | 3 |
nervous system | 2.90e-10 | 75 |
ectoderm-derived structure | 7.16e-10 | 95 |
ectoderm | 7.16e-10 | 95 |
presumptive ectoderm | 7.16e-10 | 95 |
central nervous system | 8.22e-08 | 73 |