FFCP PHASE1:Mm9::chr10:127286945..127286957,+: Difference between revisions
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{{FFCP|EntrezGene=216453|HGNC=|MCL_coexpression_id=252|UniProt=G5E8H9,E9QA87|association_with_transcript=-26bp_to_ENSMUST00000077530,ENSMUST00000165171,NM_147222,uc007hkt.1_5end|description=CAGE_peak_1_at_Rdh19_5end|id=chr10:127286945..127286957,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!6.29e-19!14;UBERON:0003918!6.29e-19!14;UBERON:0005095!6.29e-19!14;UBERON:0007687!6.29e-19!14;UBERON:0006554!2.32e-16!16;UBERON:0001008!2.64e-15!17;UBERON:0000489!4.41e-12!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.68e-44,14;UBERON:0003918,2.68e-44,14;UBERON:0011143,2.68e-44,14;UBERON:0005095,2.68e-44,14;UBERON:0007687,2.68e-44,14;UBERON:0006554,1.83e-34,18;UBERON:0001008,1.19e-32,19;UBERON:0000489,1.53e-29,21;UBERON:0005172,7.21e-16,49;UBERON:0005173,7.21e-16,49;UBERON:0002417,7.21e-16,49;UBERON:0000916,7.21e-16,49;UBERON:0003103,2.29e-14,43;UBERON:0003104,1.06e-12,61;UBERON:0009142,1.06e-12,61;UBERON:0009569,1.02e-11,66;UBERON:0005177,9.73e-10,79;UBERON:0002100,1.67e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,7.88954149711563,4.48032921259691,8.14600446104028,6.31222379012867,18.0224130804133,13.4325234661438,10.3619160375307,3.57851775373222,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0,0|short_description=p1@Rdh19}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216453 | |||
|HGNC= | |||
|MCL_coexpression_id=252 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E8H9,uniprot:E9QA87 | |||
|association_with_transcript=-26bp_to_ENSMUST00000077530,ENSMUST00000165171,NM_147222,uc007hkt.1_5end | |||
|cluster_id=chr10:127286945..127286957,+ | |||
|description=CAGE_peak_1_at_Rdh19_5end | |||
|id=chr10:127286945..127286957,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!6.29e-19!14;UBERON:0003918!6.29e-19!14;UBERON:0005095!6.29e-19!14;UBERON:0007687!6.29e-19!14;UBERON:0006554!2.32e-16!16;UBERON:0001008!2.64e-15!17;UBERON:0000489!4.41e-12!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.68e-44,14;UBERON:0003918,2.68e-44,14;UBERON:0011143,2.68e-44,14;UBERON:0005095,2.68e-44,14;UBERON:0007687,2.68e-44,14;UBERON:0006554,1.83e-34,18;UBERON:0001008,1.19e-32,19;UBERON:0000489,1.53e-29,21;UBERON:0005172,7.21e-16,49;UBERON:0005173,7.21e-16,49;UBERON:0002417,7.21e-16,49;UBERON:0000916,7.21e-16,49;UBERON:0003103,2.29e-14,43;UBERON:0003104,1.06e-12,61;UBERON:0009142,1.06e-12,61;UBERON:0009569,1.02e-11,66;UBERON:0005177,9.73e-10,79;UBERON:0002100,1.67e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,7.88954149711563,4.48032921259691,8.14600446104028,6.31222379012867,18.0224130804133,13.4325234661438,10.3619160375307,3.57851775373222,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0,0 | |||
|short_description=p1@Rdh19 | |||
}} |
Revision as of 01:56, 4 August 2015
Short description: | p1@Rdh19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rdh19_5end |
Coexpression cluster: | MCL_coexpression_mm9:252 |
Association with transcript: | -26bp_to_ENSMUST00000077530, ENSMUST00000165171, NM_147222, uc007hkt.1_5end |
EntrezGene: | 216453 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 2.68e-44 | 14 |
kidney mesenchyme | 2.68e-44 | 14 |
upper urinary tract | 2.68e-44 | 14 |
kidney rudiment | 2.68e-44 | 14 |
kidney field | 2.68e-44 | 14 |
urinary system structure | 1.83e-34 | 18 |
renal system | 1.19e-32 | 19 |
cavitated compound organ | 1.53e-29 | 21 |
abdomen element | 7.21e-16 | 49 |
abdominal segment element | 7.21e-16 | 49 |
abdominal segment of trunk | 7.21e-16 | 49 |
abdomen | 7.21e-16 | 49 |
compound organ | 2.29e-14 | 43 |
mesenchyme | 1.06e-12 | 61 |
entire embryonic mesenchyme | 1.06e-12 | 61 |
subdivision of trunk | 1.02e-11 | 66 |
trunk region element | 9.73e-10 | 79 |
trunk | 1.67e-08 | 90 |