FFCP PHASE1:Mm9::chr19:41067686..41067700,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=889|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:41067686..41067700,+|id=chr19:41067686..41067700,+|ontology_enrichment_celltype=CL:0002563!1.50e-14!9;CL:0002251!1.50e-14!9;CL:0000239!4.78e-10!6;CL:0000677!4.78e-10!6;CL:0000212!4.78e-10!6;CL:0000584!4.78e-10!6;CL:0000075!1.98e-08!7;CL:0000066!3.15e-08!25;CL:0002076!1.01e-07!15|ontology_enrichment_celltype_v019_2=CL:0002563,3.13e-26,9;CL:0002251,3.13e-26,9;CL:0000239,1.15e-17,6;CL:0000677,1.15e-17,6;CL:0000584,1.15e-17,6;CL:0000075,4.87e-15,7;CL:0002076,4.89e-15,15;CL:0000066,7.79e-15,25;CL:0000223,7.69e-11,20;CL:0002250,3.89e-10,3;CL:0000682,5.24e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.21e-29!43;UBERON:0005409!9.74e-29!59;UBERON:0000344!9.55e-22!15;UBERON:0001242!4.82e-19!13;UBERON:0000060!4.82e-19!13;UBERON:0001262!4.82e-19!13;UBERON:0004786!4.82e-19!13;UBERON:0003350!1.50e-14!9;UBERON:0004808!1.50e-14!9;UBERON:0001277!1.50e-14!9;UBERON:0004923!8.56e-12!24;UBERON:0000485!1.97e-11!11;UBERON:0001007!5.13e-10!128;UBERON:0001555!5.13e-10!128;UBERON:0007026!5.13e-10!128;UBERON:0004119!1.11e-09!130;UBERON:0000925!1.11e-09!130;UBERON:0006595!1.11e-09!130;UBERON:0004921!1.00e-08!126;UBERON:0004185!1.00e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.26e-55,31;UBERON:0005409,5.88e-41,47;UBERON:0000344,7.14e-31,15;UBERON:0003350,3.13e-26,9;UBERON:0004808,3.13e-26,9;UBERON:0001277,3.13e-26,9;UBERON:0001242,7.84e-26,13;UBERON:0001262,7.84e-26,13;UBERON:0004786,7.84e-26,13;UBERON:0000485,3.83e-21,11;UBERON:0004923,3.30e-18,24;UBERON:0001007,6.70e-16,116;UBERON:0001555,6.70e-16,116;UBERON:0007026,6.70e-16,116;UBERON:0004119,1.57e-15,118;UBERON:0000925,1.57e-15,118;UBERON:0006595,1.57e-15,118;UBERON:0004921,1.51e-13,114|phase1_expression=0,6.97950815278722,7.27998783023258,13.3084252975005,10.5188103288733,5.54001597309236,9.81173090501208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.31960598525715,3.44113921600755,4.59385571292016,5.59990595006797,5.60225204983311,0.570070258369122,0.756090389279792,2.88249663851896,0,0,0,17.6199488048278,11.802659820453,12.0459920194798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,5.81791246659797,0,0.232236671860439,2.31961430379768,3.22693639397348,6.67134131534611,4.94586627892654,2.84717436926707,3.78807595865225,2.5133520880027,2.78539060857611,2.9244613067868,0.898819408654221,1.51296634912286,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.324016022465404,0.209088296014469,0.655087691238533,0.134864346384821,0.0826534557253359,0,6.86959358446502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0,0.187283014939765,0.256100609619477,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.290692833264657,0,0.169229215783353,0,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr19:41067686..41067700,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=889 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:41067686..41067700,+ | |||
|description=CAGE_peak_at_chr19:41067686..41067700,+ | |||
|id=chr19:41067686..41067700,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.50e-14!9;CL:0002251!1.50e-14!9;CL:0000239!4.78e-10!6;CL:0000677!4.78e-10!6;CL:0000212!4.78e-10!6;CL:0000584!4.78e-10!6;CL:0000075!1.98e-08!7;CL:0000066!3.15e-08!25;CL:0002076!1.01e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.13e-26,9;CL:0002251,3.13e-26,9;CL:0000239,1.15e-17,6;CL:0000677,1.15e-17,6;CL:0000584,1.15e-17,6;CL:0000075,4.87e-15,7;CL:0002076,4.89e-15,15;CL:0000066,7.79e-15,25;CL:0000223,7.69e-11,20;CL:0002250,3.89e-10,3;CL:0000682,5.24e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.21e-29!43;UBERON:0005409!9.74e-29!59;UBERON:0000344!9.55e-22!15;UBERON:0001242!4.82e-19!13;UBERON:0000060!4.82e-19!13;UBERON:0001262!4.82e-19!13;UBERON:0004786!4.82e-19!13;UBERON:0003350!1.50e-14!9;UBERON:0004808!1.50e-14!9;UBERON:0001277!1.50e-14!9;UBERON:0004923!8.56e-12!24;UBERON:0000485!1.97e-11!11;UBERON:0001007!5.13e-10!128;UBERON:0001555!5.13e-10!128;UBERON:0007026!5.13e-10!128;UBERON:0004119!1.11e-09!130;UBERON:0000925!1.11e-09!130;UBERON:0006595!1.11e-09!130;UBERON:0004921!1.00e-08!126;UBERON:0004185!1.00e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.26e-55,31;UBERON:0005409,5.88e-41,47;UBERON:0000344,7.14e-31,15;UBERON:0003350,3.13e-26,9;UBERON:0004808,3.13e-26,9;UBERON:0001277,3.13e-26,9;UBERON:0001242,7.84e-26,13;UBERON:0001262,7.84e-26,13;UBERON:0004786,7.84e-26,13;UBERON:0000485,3.83e-21,11;UBERON:0004923,3.30e-18,24;UBERON:0001007,6.70e-16,116;UBERON:0001555,6.70e-16,116;UBERON:0007026,6.70e-16,116;UBERON:0004119,1.57e-15,118;UBERON:0000925,1.57e-15,118;UBERON:0006595,1.57e-15,118;UBERON:0004921,1.51e-13,114 | |||
|phase1_expression=0,6.97950815278722,7.27998783023258,13.3084252975005,10.5188103288733,5.54001597309236,9.81173090501208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.31960598525715,3.44113921600755,4.59385571292016,5.59990595006797,5.60225204983311,0.570070258369122,0.756090389279792,2.88249663851896,0,0,0,17.6199488048278,11.802659820453,12.0459920194798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,5.81791246659797,0,0.232236671860439,2.31961430379768,3.22693639397348,6.67134131534611,4.94586627892654,2.84717436926707,3.78807595865225,2.5133520880027,2.78539060857611,2.9244613067868,0.898819408654221,1.51296634912286,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.324016022465404,0.209088296014469,0.655087691238533,0.134864346384821,0.0826534557253359,0,6.86959358446502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0,0.187283014939765,0.256100609619477,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.290692833264657,0,0.169229215783353,0,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr19:41067686..41067700,+ | |||
}} |
Latest revision as of 02:06, 4 August 2015
Short description: | p@chr19:41067686..41067700, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:41067686..41067700, + |
Coexpression cluster: | MCL_coexpression_mm9:889 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.13e-26 | 9 |
epithelial cell of alimentary canal | 3.13e-26 | 9 |
brush border epithelial cell | 1.15e-17 | 6 |
gut absorptive cell | 1.15e-17 | 6 |
enterocyte | 1.15e-17 | 6 |
columnar/cuboidal epithelial cell | 4.87e-15 | 7 |
endo-epithelial cell | 4.89e-15 | 15 |
epithelial cell | 7.79e-15 | 25 |
endodermal cell | 7.69e-11 | 20 |
intestinal crypt stem cell | 3.89e-10 | 3 |
M cell of gut | 5.24e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.26e-55 | 31 |
gastrointestinal system | 5.88e-41 | 47 |
mucosa | 7.14e-31 | 15 |
epithelium of mucosa | 3.13e-26 | 9 |
gastrointestinal system epithelium | 3.13e-26 | 9 |
intestinal epithelium | 3.13e-26 | 9 |
intestinal mucosa | 7.84e-26 | 13 |
wall of intestine | 7.84e-26 | 13 |
gastrointestinal system mucosa | 7.84e-26 | 13 |
simple columnar epithelium | 3.83e-21 | 11 |
organ component layer | 3.30e-18 | 24 |
digestive system | 6.70e-16 | 116 |
digestive tract | 6.70e-16 | 116 |
primitive gut | 6.70e-16 | 116 |
endoderm-derived structure | 1.57e-15 | 118 |
endoderm | 1.57e-15 | 118 |
presumptive endoderm | 1.57e-15 | 118 |
subdivision of digestive tract | 1.51e-13 | 114 |