FFCP PHASE1:Mm9::chr11:78787282..78787293,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=68|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:78787282..78787293,+|id=chr11:78787282..78787293,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,6.64e-38,3;CL:0000351,6.64e-38,3;CL:0000893,1.61e-09,6;CL:0002489,1.61e-09,6;CL:0000898,1.61e-09,6;CL:0000809,1.61e-09,6;CL:0000810,1.61e-09,6;CL:0000895,1.61e-09,6;CL:0000808,1.61e-09,6;CL:0000894,1.61e-09,6;CL:0000806,1.61e-09,6;CL:0000807,1.61e-09,6;CL:0000805,1.61e-09,6;CL:0002425,1.61e-09,6;CL:0002436,1.61e-09,6;CL:0002427,1.61e-09,6;CL:0002428,1.61e-09,6;CL:0002429,1.61e-09,6;CL:0002433,1.61e-09,6;CL:0002431,1.61e-09,6;CL:0002432,1.61e-09,6;CL:0000624,2.29e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001948!2.06e-07!5;UBERON:0002315!2.06e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000358,6.64e-38,3;UBERON:0000307,6.64e-38,3;UBERON:0007010,6.64e-38,3;UBERON:0001987,2.35e-07,2;UBERON:0003124,2.35e-07,2;UBERON:0004340,2.35e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.936258105287974,6.16384685611818,3.03134204182278,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,1.3013942122792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521472960576829,0,0,0.162241263067758,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.469343416127421,1.27099242518292,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0.302899349844443,0.0762068066549998,0,0,0,0,0,1.99787358036658,1.61484941897056,1.34307693091263,0,0,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.145346416632329,0,0,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0,0,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p@chr11:78787282..78787293,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:78787282..78787293,+ | |||
|description=CAGE_peak_at_chr11:78787282..78787293,+ | |||
|id=chr11:78787282..78787293,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.64e-38,3;CL:0000351,6.64e-38,3;CL:0000893,1.61e-09,6;CL:0002489,1.61e-09,6;CL:0000898,1.61e-09,6;CL:0000809,1.61e-09,6;CL:0000810,1.61e-09,6;CL:0000895,1.61e-09,6;CL:0000808,1.61e-09,6;CL:0000894,1.61e-09,6;CL:0000806,1.61e-09,6;CL:0000807,1.61e-09,6;CL:0000805,1.61e-09,6;CL:0002425,1.61e-09,6;CL:0002436,1.61e-09,6;CL:0002427,1.61e-09,6;CL:0002428,1.61e-09,6;CL:0002429,1.61e-09,6;CL:0002433,1.61e-09,6;CL:0002431,1.61e-09,6;CL:0002432,1.61e-09,6;CL:0000624,2.29e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001948!2.06e-07!5;UBERON:0002315!2.06e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,6.64e-38,3;UBERON:0000307,6.64e-38,3;UBERON:0007010,6.64e-38,3;UBERON:0001987,2.35e-07,2;UBERON:0003124,2.35e-07,2;UBERON:0004340,2.35e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.936258105287974,6.16384685611818,3.03134204182278,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,1.3013942122792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521472960576829,0,0,0.162241263067758,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.469343416127421,1.27099242518292,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0.302899349844443,0.0762068066549998,0,0,0,0,0,1.99787358036658,1.61484941897056,1.34307693091263,0,0,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.145346416632329,0,0,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr11:78787282..78787293,+ | |||
}} |
Latest revision as of 02:30, 4 August 2015
Short description: | p@chr11:78787282..78787293, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:78787282..78787293, + |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.64e-38 | 3 |
trophoblast cell | 6.64e-38 | 3 |
thymocyte | 1.61e-09 | 6 |
double negative thymocyte | 1.61e-09 | 6 |
naive T cell | 1.61e-09 | 6 |
double-positive, alpha-beta thymocyte | 1.61e-09 | 6 |
CD4-positive, alpha-beta thymocyte | 1.61e-09 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.61e-09 | 6 |
DN4 thymocyte | 1.61e-09 | 6 |
DN1 thymic pro-T cell | 1.61e-09 | 6 |
DN2 thymocyte | 1.61e-09 | 6 |
DN3 thymocyte | 1.61e-09 | 6 |
immature single positive thymocyte | 1.61e-09 | 6 |
early T lineage precursor | 1.61e-09 | 6 |
mature CD4 single-positive thymocyte | 1.61e-09 | 6 |
resting double-positive thymocyte | 1.61e-09 | 6 |
double-positive blast | 1.61e-09 | 6 |
CD69-positive double-positive thymocyte | 1.61e-09 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.61e-09 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.61e-09 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.61e-09 | 6 |
CD4-positive, alpha-beta T cell | 2.29e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 6.64e-38 | 3 |
blastula | 6.64e-38 | 3 |
cleaving embryo | 6.64e-38 | 3 |
placenta | 2.35e-07 | 2 |
chorion | 2.35e-07 | 2 |
allantois | 2.35e-07 | 2 |