FFCP PHASE1:Mm9::chr16:89141129..89141134,+: Difference between revisions
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{{FFCP|EntrezGene=100040267|HGNC=|MCL_coexpression_id=422|UniProt=D3YWL8|association_with_transcript=-54bp_to_ENSMUST00000089101_5end|description=CAGE_peak_1_at_Gm2683_5end|id=chr16:89141129..89141134,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!1.40e-19!5;UBERON:0001003!1.40e-19!5;UBERON:0002097!1.40e-19!5;UBERON:0002199!1.40e-19!5;UBERON:0007029!1.40e-19!5;UBERON:0007376!1.40e-19!5;UBERON:0002416!1.40e-19!5;UBERON:0007383!1.40e-19!5;UBERON:0003102!3.10e-09!23|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.61e-18,5;UBERON:0001003,2.61e-18,5;UBERON:0002097,2.61e-18,5;UBERON:0002199,2.61e-18,5;UBERON:0007029,2.61e-18,5;UBERON:0007376,2.61e-18,5;UBERON:0002416,2.61e-18,5;UBERON:0007383,2.61e-18,5;UBERON:0003102,1.26e-16,22;UBERON:0002102,1.55e-13,7;UBERON:0004710,1.55e-13,7;UBERON:0005419,1.55e-13,7;UBERON:0005417,1.55e-13,7;UBERON:0005729,1.55e-13,7;UBERON:0010708,5.55e-12,8;UBERON:0000026,2.45e-08,12;UBERON:0004708,2.45e-08,12;UBERON:0002101,2.45e-08,12;UBERON:0004357,2.45e-08,12;UBERON:0004347,2.45e-08,12;UBERON:0005732,2.45e-08,12;UBERON:0005733,2.45e-08,12;UBERON:0010707,8.98e-08,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83077383174383,14.404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.244312647074,0,0.180938774784468,0.954978752025092,2.46211349617592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0.701794825336225,0.429742108096597,0.765153328275374,0.441182838239031,0.463735671240843|short_description=p1@Gm2683}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100040267 | |||
|HGNC= | |||
|MCL_coexpression_id=422 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YWL8 | |||
|association_with_transcript=-54bp_to_ENSMUST00000089101_5end | |||
|cluster_id=chr16:89141129..89141134,+ | |||
|description=CAGE_peak_1_at_Gm2683_5end | |||
|id=chr16:89141129..89141134,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!1.40e-19!5;UBERON:0001003!1.40e-19!5;UBERON:0002097!1.40e-19!5;UBERON:0002199!1.40e-19!5;UBERON:0007029!1.40e-19!5;UBERON:0007376!1.40e-19!5;UBERON:0002416!1.40e-19!5;UBERON:0007383!1.40e-19!5;UBERON:0003102!3.10e-09!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.61e-18,5;UBERON:0001003,2.61e-18,5;UBERON:0002097,2.61e-18,5;UBERON:0002199,2.61e-18,5;UBERON:0007029,2.61e-18,5;UBERON:0007376,2.61e-18,5;UBERON:0002416,2.61e-18,5;UBERON:0007383,2.61e-18,5;UBERON:0003102,1.26e-16,22;UBERON:0002102,1.55e-13,7;UBERON:0004710,1.55e-13,7;UBERON:0005419,1.55e-13,7;UBERON:0005417,1.55e-13,7;UBERON:0005729,1.55e-13,7;UBERON:0010708,5.55e-12,8;UBERON:0000026,2.45e-08,12;UBERON:0004708,2.45e-08,12;UBERON:0002101,2.45e-08,12;UBERON:0004357,2.45e-08,12;UBERON:0004347,2.45e-08,12;UBERON:0005732,2.45e-08,12;UBERON:0005733,2.45e-08,12;UBERON:0010707,8.98e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83077383174383,14.404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.244312647074,0,0.180938774784468,0.954978752025092,2.46211349617592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0.701794825336225,0.429742108096597,0.765153328275374,0.441182838239031,0.463735671240843 | |||
|short_description=p1@Gm2683 | |||
}} |
Revision as of 03:50, 4 August 2015
Short description: | p1@Gm2683 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm2683_5end |
Coexpression cluster: | MCL_coexpression_mm9:422 |
Association with transcript: | -54bp_to_ENSMUST00000089101_5end |
EntrezGene: | 100040267 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 2.61e-18 | 5 |
skin epidermis | 2.61e-18 | 5 |
skin of body | 2.61e-18 | 5 |
integument | 2.61e-18 | 5 |
surface | 2.61e-18 | 5 |
outer epithelium | 2.61e-18 | 5 |
integumental system | 2.61e-18 | 5 |
enveloping layer of ectoderm | 2.61e-18 | 5 |
surface structure | 1.26e-16 | 22 |
forelimb | 1.55e-13 | 7 |
pectoral appendage | 1.55e-13 | 7 |
pectoral appendage bud | 1.55e-13 | 7 |
forelimb bud | 1.55e-13 | 7 |
forelimb/pectoral fin field | 1.55e-13 | 7 |
pectoral complex | 5.55e-12 | 8 |
appendage | 2.45e-08 | 12 |
paired limb/fin | 2.45e-08 | 12 |
limb | 2.45e-08 | 12 |
paired limb/fin bud | 2.45e-08 | 12 |
limb bud | 2.45e-08 | 12 |
limb/fin field | 2.45e-08 | 12 |
limb field | 2.45e-08 | 12 |
appendage girdle complex | 8.98e-08 | 13 |