FFCP PHASE1:Mm9::chr2:143738263..143738267,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1993|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:143738263..143738267,+|id=chr2:143738263..143738267,+|ontology_enrichment_celltype=CL:0002563!8.57e-36!9;CL:0002251!8.57e-36!9;CL:0000239!1.57e-24!6;CL:0000677!1.57e-24!6;CL:0000212!1.57e-24!6;CL:0000584!1.57e-24!6;CL:0000066!1.04e-21!25;CL:0000075!5.87e-21!7;CL:0002076!6.23e-21!15;CL:0000223!2.39e-15!20;CL:0000473!4.54e-13!3;CL:0000627!4.54e-13!3;CL:0000682!4.54e-13!3;CL:0002250!8.61e-13!3;CL:0000063!7.13e-07!66|ontology_enrichment_celltype_v019_2=CL:0002563,7.03e-65,9;CL:0002251,7.03e-65,9;CL:0000239,5.58e-44,6;CL:0000677,5.58e-44,6;CL:0000584,5.58e-44,6;CL:0000066,2.85e-41,25;CL:0002076,9.38e-39,15;CL:0000075,1.06e-37,7;CL:0000223,6.18e-29,20;CL:0000682,9.32e-23,3;CL:0002250,3.03e-22,3;CL:0000473,4.03e-10,7;CL:0002321,9.63e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.60e-56!15;UBERON:0001242!2.82e-49!13;UBERON:0000060!2.82e-49!13;UBERON:0001262!2.82e-49!13;UBERON:0004786!2.82e-49!13;UBERON:0003350!8.57e-36!9;UBERON:0004808!8.57e-36!9;UBERON:0001277!8.57e-36!9;UBERON:0004923!2.30e-34!24;UBERON:0000485!4.83e-29!11;UBERON:0000160!1.43e-20!43;UBERON:0005409!3.75e-16!59;UBERON:0000331!2.41e-11!3;UBERON:0002116!2.41e-11!3;UBERON:0001204!2.41e-11!3;UBERON:0001168!2.41e-11!3;UBERON:0001962!1.35e-08!2;UBERON:0001961!1.35e-08!2;UBERON:0001744!1.35e-08!2;UBERON:0001007!1.03e-07!128;UBERON:0001555!1.03e-07!128;UBERON:0007026!1.03e-07!128;UBERON:0004119!1.53e-07!130;UBERON:0000925!1.53e-07!130;UBERON:0006595!1.53e-07!130;UBERON:0000064!2.66e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.03e-65,9;UBERON:0004808,7.03e-65,9;UBERON:0001277,7.03e-65,9;UBERON:0000485,5.19e-53,11;UBERON:0001242,8.66e-45,13;UBERON:0001262,8.66e-45,13;UBERON:0004786,8.66e-45,13;UBERON:0000344,9.38e-39,15;UBERON:0004923,5.12e-24,24;UBERON:0000160,1.88e-18,31;UBERON:0005409,6.27e-12,47;UBERON:0003929,4.42e-10,55;UBERON:0000490,2.90e-08,66;UBERON:0005911,7.23e-08,69|phase1_expression=0,5.58360652222978,2.72999543633722,4.23449895829562,4.00716583957078,5.20425742926858,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.91763712426868,2.8711598205751,5.59990595006797,3.44753972297422,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,3.46621943701529,1.66234645358492,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:143738263..143738267,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1993 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:143738263..143738267,+ | |||
|description=CAGE_peak_at_chr2:143738263..143738267,+ | |||
|id=chr2:143738263..143738267,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.57e-36!9;CL:0002251!8.57e-36!9;CL:0000239!1.57e-24!6;CL:0000677!1.57e-24!6;CL:0000212!1.57e-24!6;CL:0000584!1.57e-24!6;CL:0000066!1.04e-21!25;CL:0000075!5.87e-21!7;CL:0002076!6.23e-21!15;CL:0000223!2.39e-15!20;CL:0000473!4.54e-13!3;CL:0000627!4.54e-13!3;CL:0000682!4.54e-13!3;CL:0002250!8.61e-13!3;CL:0000063!7.13e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.03e-65,9;CL:0002251,7.03e-65,9;CL:0000239,5.58e-44,6;CL:0000677,5.58e-44,6;CL:0000584,5.58e-44,6;CL:0000066,2.85e-41,25;CL:0002076,9.38e-39,15;CL:0000075,1.06e-37,7;CL:0000223,6.18e-29,20;CL:0000682,9.32e-23,3;CL:0002250,3.03e-22,3;CL:0000473,4.03e-10,7;CL:0002321,9.63e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.60e-56!15;UBERON:0001242!2.82e-49!13;UBERON:0000060!2.82e-49!13;UBERON:0001262!2.82e-49!13;UBERON:0004786!2.82e-49!13;UBERON:0003350!8.57e-36!9;UBERON:0004808!8.57e-36!9;UBERON:0001277!8.57e-36!9;UBERON:0004923!2.30e-34!24;UBERON:0000485!4.83e-29!11;UBERON:0000160!1.43e-20!43;UBERON:0005409!3.75e-16!59;UBERON:0000331!2.41e-11!3;UBERON:0002116!2.41e-11!3;UBERON:0001204!2.41e-11!3;UBERON:0001168!2.41e-11!3;UBERON:0001962!1.35e-08!2;UBERON:0001961!1.35e-08!2;UBERON:0001744!1.35e-08!2;UBERON:0001007!1.03e-07!128;UBERON:0001555!1.03e-07!128;UBERON:0007026!1.03e-07!128;UBERON:0004119!1.53e-07!130;UBERON:0000925!1.53e-07!130;UBERON:0006595!1.53e-07!130;UBERON:0000064!2.66e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.03e-65,9;UBERON:0004808,7.03e-65,9;UBERON:0001277,7.03e-65,9;UBERON:0000485,5.19e-53,11;UBERON:0001242,8.66e-45,13;UBERON:0001262,8.66e-45,13;UBERON:0004786,8.66e-45,13;UBERON:0000344,9.38e-39,15;UBERON:0004923,5.12e-24,24;UBERON:0000160,1.88e-18,31;UBERON:0005409,6.27e-12,47;UBERON:0003929,4.42e-10,55;UBERON:0000490,2.90e-08,66;UBERON:0005911,7.23e-08,69 | |||
|phase1_expression=0,5.58360652222978,2.72999543633722,4.23449895829562,4.00716583957078,5.20425742926858,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.91763712426868,2.8711598205751,5.59990595006797,3.44753972297422,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,3.46621943701529,1.66234645358492,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:143738263..143738267,+ | |||
}} |
Latest revision as of 04:29, 4 August 2015
Short description: | p@chr2:143738263..143738267, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:143738263..143738267, + |
Coexpression cluster: | MCL_coexpression_mm9:1993 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.03e-65 | 9 |
epithelial cell of alimentary canal | 7.03e-65 | 9 |
brush border epithelial cell | 5.58e-44 | 6 |
gut absorptive cell | 5.58e-44 | 6 |
enterocyte | 5.58e-44 | 6 |
epithelial cell | 2.85e-41 | 25 |
endo-epithelial cell | 9.38e-39 | 15 |
columnar/cuboidal epithelial cell | 1.06e-37 | 7 |
endodermal cell | 6.18e-29 | 20 |
M cell of gut | 9.32e-23 | 3 |
intestinal crypt stem cell | 3.03e-22 | 3 |
defensive cell | 4.03e-10 | 7 |
embryonic cell | 9.63e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 7.03e-65 | 9 |
gastrointestinal system epithelium | 7.03e-65 | 9 |
intestinal epithelium | 7.03e-65 | 9 |
simple columnar epithelium | 5.19e-53 | 11 |
intestinal mucosa | 8.66e-45 | 13 |
wall of intestine | 8.66e-45 | 13 |
gastrointestinal system mucosa | 8.66e-45 | 13 |
mucosa | 9.38e-39 | 15 |
organ component layer | 5.12e-24 | 24 |
intestine | 1.88e-18 | 31 |
gastrointestinal system | 6.27e-12 | 47 |
gut epithelium | 4.42e-10 | 55 |
unilaminar epithelium | 2.90e-08 | 66 |
endo-epithelium | 7.23e-08 | 69 |