FFCP PHASE1:Mm9::chr2:153567054..153567063,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13589|HGNC=|UniProt=Q3U4H0,Q61166|association_with_transcript=31bp_to_NM_007896,uc008nik.1_5end|description=CAGE_peak_4_at_Mapre1_5end|id=chr2:153567054..153567063,+|ontology_enrichment_celltype=CL:0000393!6.36e-11!39;CL:0000211!6.36e-11!39;CL:0000540!2.60e-10!33;CL:0000047!2.60e-10!33;CL:0000031!2.60e-10!33;CL:0000404!2.60e-10!33;CL:0000117!4.95e-10!23;CL:0000337!4.95e-10!23;CL:0000221!4.09e-09!44;CL:0000133!4.09e-09!44;CL:0002319!8.50e-09!43;CL:0000055!8.68e-09!50;CL:0000034!5.89e-08!97;CL:0000144!6.74e-07!121;CL:0000012!6.74e-07!121|ontology_enrichment_celltype_v019_2=CL:0000393,2.31e-12,39;CL:0000211,2.31e-12,39;CL:0000540,5.20e-12,33;CL:0000047,5.20e-12,33;CL:0000031,5.20e-12,33;CL:0000404,5.20e-12,33;CL:0000221,1.11e-11,44;CL:0000133,1.11e-11,44;CL:0000117,2.20e-11,23;CL:0000337,2.20e-11,23;CL:0002319,2.58e-11,43;CL:0000034,4.25e-10,97;CL:0000723,3.44e-08,91;CL:0000048,3.44e-08,91;CL:0002321,1.08e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.13e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.96e-08,34|phase1_expression=2.08193501236232,1.39590163055744,0.909998478779072,0.60492842261366,0,0.503637815735669,0.700837921786577,0.516493293766305,1.12630977721333,1.87251621057595,1.19852577757853,1.27635454392538,1.36960583944965,0.874204024189974,0.999329285446988,1.41732687172878,1.39912375625629,0.946386496074713,0.411343300817216,0,1.7008658030214,1.39007331681239,0.783599367416806,0.47997726838022,1.14704640533585,0.57423196411502,0.430761996159075,0.646413698057667,0.570070258369122,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0.664938581433969,0.204169356262369,1.67412652294763,2.3440060335714,1.57057123192139,1.76469446409304,2.73218193983378,2.91306211818692,0.881277725829041,1.4192770370732,1.10128051297009,0,0.218025156380447,1.5378032791413,1.74986909166855,1.39986421625363,0,1.67782606057736,2.17608642603403,1.00828139742739,2.05807548828758,2.86533439938757,2.06268836910977,3.84401275633236,2.11596391708813,1.26766280701236,1.69422266034566,0.889294796111139,1.7997994345628,0.988866362566974,0.7104801149461,0.299600110518405,2.68952813725088,5.18448061542388,5.40023753326763,4.41682418837902,6.28432165688368,5.07997644188711,2.32732518508413,4.31304619582064,5.51531271966013,0,2.80912143787413,1.99688493233117,3.16527090552465,5.94669683415663,3.12548022334056,1.95428099300967,0.56276261003168,3.81995619442025,5.30331453852602,4.41352210477219,3.16879057903011,4.39211921332468,3.85414956544606,0.289864488701678,0,0,1.07940638327563,0,0,0.983110940922263,4.4311883870295,4.67614808285164,3.5333957451034,1.97180787687353,3.84979432242953,2.54805239706646,0,3.24736561516821,1.26679932737549,2.02209778005913,0.5709193985953,1.29468941823586,0.890652834388949,0.867426633830679,0.304465478312141,1.38369298353635,1.50722640552623,0.940709657085638,1.50799909595611,0.494389935468748,0.578397427679647,0.884610551949874,1.45590164952668,1.10420759230197,0.484875253135222,0,0.292780797011547,0.83778682725382,0.510914110417183,2.39630249011841,0,2.66847476853436,0.449371918214468,0.457500602818626,3.5183218591602,1.39059456153821,1.79000820131231,0.62336413367868,0.811206315338788,1.2220723662038,0.497627882440372,0.505445516867349,0.841767423545896,0.910843100738926,2.06911893990126,1.80062129805349,1.65775299619287,0.816437989815934,1.2811372028485,1.49922759295566,0.776110112217047,1.07783996466421,1.51284864134255,0.879755620819744,0.657587197282725,0.834141747676794,2.089512999133,0.823128545631774,0.995171334092466,3.51106593656617,1.80143534980301,3.40996199274711,2.48550927042602,2.57978665979206,2.88099298337624,2.13070262026689,0.787056926989615,1.3884040159864,1.16266972375204,2.41446061259657,1.63471479314037,1.48103864922132,1.64167464079095,0.729619285912702,1.02339991197733,1.09775057645525,0.134206418760372,0.210289948564127,2.6755199218614,0.660837565967596,0.264450566663544,1.06644125267617,1.39342003116263,1.54640953586512,1.21010114774006,0.444756087689741,1.14135375667535,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0.898819408654221,0.432276099749388,0.398282546508734,1.89667900953082,1.5994791765362,1.1270773567308,0.610953983535943,0.581857461502877,1.05203729835478,1.01178459398812,0.590440591918409,0.470996183524124,0.246794327843601,0,1.16791574001266,1.57247196090562,1.12431056192427,1.42002084971952,1.4470629585145,0.763877555344259,0.863088412352432,1.78348749452539,1.09824565275233,0,1.11642284300551,0.936113019343682,0,0.358794827043824,0.482443521363367,0.554259570499814,1.89491411770485,1.62964976442026,1.18821560042632,0.704070744865506,1.17254380209271,0.952174563544055,0.975668239288994,0.630540576424764,1.55025282754142,1.11618338060241,0.81931657357869,1.20879487306127,1.44649058581512,1.50791283939272,2.71952841909355,0.491764273019036,0.275936746304732,0.321101179975584,0.586058432961016,1.14754461763673,0.757412781613119,2.52406575533005,1.17131623288992,1.72338718186239,0,1.55959071857676,1.13230612315533,3.64329631507405,1.16902343164525,1.97643888973262,0.642642632843614,0.709700426041343,1.24645922567079,1.95464351224291,0.659880491890142,0,0.971122544619926,1.209294227859,0.377210159511796,1.18120757152309,0.922305443831782,0.516856586336442,1.81766864738753,0.356497378384721,0.948110273807448,0,1.03135543248187,1.02131881726136,0.720244376125241,0.776152102696527,1.28602221018955,0.709360934569094,2.31879462882692,1.15184314421485,0.608929898229199,1.40803024838226,0.847328283455281,0.661585194164886,0.65954501176592,0.968786560175433,1.14594557363496,1.43246812803764,0.328281799490123,0.291480836629851,0.741701208042039,0.341741761595705,1.23832120777933,1.66675074632741,0.753473828018764,1.23024804948923,0.457556346413045,1.86976272993241,1.6794174278839,1.65839968565309,1.90934123603023,0.632671987162271,1.82987520414164,1.18805874903981,0.418176592028937,1.31017538247707,0.944050424693745,0.826534557253359,1.30877970992015,1.16653475962614,0,2.81846469342095,1.19613236835183,1.65458490457098,1.16670713006429,2.0665571756437,1.18269287843545,2.11243029562357,1.3020438484395,1.67774951081137,1.69108884578204,2.01621004380506,0.632022241256357,0.810900861160657,0.924398614483445,0.909445760844565,0.358053391334963,0.993406773906324,1.32214994471966,0.443068581523732,1.41353029927407,1.143102099825,0.907435666231565,0.779663045918019,1.05833025804362,0.701261413089414,0.680191150845634,2.66383144048878,2.42227412845584,3.02192309455341,0.965947970160952,0.750729901804728,0.915758121336325,0.428736758158132,1.00314420807073,2.82375921308533,1.38097570952153,1.71868654031819,2.92150409984269,0.685082519770642,0.755393897389701,0.675022500231806,2.2516060161211,0.906284817968409,0,1.45302286617847,1.19707462020309,0.341467211508268,1.94485373654635,0.209613162627982,1.10306105070008,1.11123363900808,1.44224540067226,0.64183841918363,0.505394423527595,0,1.69763707247469,2.52832070168682,2.04880487695582,1.7230640686684,1.42888107384922,0.927074607558844,1.73618298417335,0.824171801606613,1.91358596174717,0.342869252385415,1.4198064492747,1.1921809497366,1.0174249164263,1.69396884747595,1.18460451048347,0.365855945745545,0.263069711437843,1.35804113845862,0,1.42362021749009,1.18205378850676,1.63692417267876,1.54936841185966,0.578719832943424,0.999242311751784,0.233931608445408,0.859484216193193,1.3390183244819,0.441182838239031,1.39120701372253|short_description=p4@Mapre1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13589 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3U4H0,uniprot:Q61166 | |||
|association_with_transcript=31bp_to_NM_007896,uc008nik.1_5end | |||
|cluster_id=chr2:153567054..153567063,+ | |||
|description=CAGE_peak_4_at_Mapre1_5end | |||
|id=chr2:153567054..153567063,+ | |||
|ontology_enrichment_celltype=CL:0000393!6.36e-11!39;CL:0000211!6.36e-11!39;CL:0000540!2.60e-10!33;CL:0000047!2.60e-10!33;CL:0000031!2.60e-10!33;CL:0000404!2.60e-10!33;CL:0000117!4.95e-10!23;CL:0000337!4.95e-10!23;CL:0000221!4.09e-09!44;CL:0000133!4.09e-09!44;CL:0002319!8.50e-09!43;CL:0000055!8.68e-09!50;CL:0000034!5.89e-08!97;CL:0000144!6.74e-07!121;CL:0000012!6.74e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.31e-12,39;CL:0000211,2.31e-12,39;CL:0000540,5.20e-12,33;CL:0000047,5.20e-12,33;CL:0000031,5.20e-12,33;CL:0000404,5.20e-12,33;CL:0000221,1.11e-11,44;CL:0000133,1.11e-11,44;CL:0000117,2.20e-11,23;CL:0000337,2.20e-11,23;CL:0002319,2.58e-11,43;CL:0000034,4.25e-10,97;CL:0000723,3.44e-08,91;CL:0000048,3.44e-08,91;CL:0002321,1.08e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.13e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.96e-08,34 | |||
|phase1_expression=2.08193501236232,1.39590163055744,0.909998478779072,0.60492842261366,0,0.503637815735669,0.700837921786577,0.516493293766305,1.12630977721333,1.87251621057595,1.19852577757853,1.27635454392538,1.36960583944965,0.874204024189974,0.999329285446988,1.41732687172878,1.39912375625629,0.946386496074713,0.411343300817216,0,1.7008658030214,1.39007331681239,0.783599367416806,0.47997726838022,1.14704640533585,0.57423196411502,0.430761996159075,0.646413698057667,0.570070258369122,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0.664938581433969,0.204169356262369,1.67412652294763,2.3440060335714,1.57057123192139,1.76469446409304,2.73218193983378,2.91306211818692,0.881277725829041,1.4192770370732,1.10128051297009,0,0.218025156380447,1.5378032791413,1.74986909166855,1.39986421625363,0,1.67782606057736,2.17608642603403,1.00828139742739,2.05807548828758,2.86533439938757,2.06268836910977,3.84401275633236,2.11596391708813,1.26766280701236,1.69422266034566,0.889294796111139,1.7997994345628,0.988866362566974,0.7104801149461,0.299600110518405,2.68952813725088,5.18448061542388,5.40023753326763,4.41682418837902,6.28432165688368,5.07997644188711,2.32732518508413,4.31304619582064,5.51531271966013,0,2.80912143787413,1.99688493233117,3.16527090552465,5.94669683415663,3.12548022334056,1.95428099300967,0.56276261003168,3.81995619442025,5.30331453852602,4.41352210477219,3.16879057903011,4.39211921332468,3.85414956544606,0.289864488701678,0,0,1.07940638327563,0,0,0.983110940922263,4.4311883870295,4.67614808285164,3.5333957451034,1.97180787687353,3.84979432242953,2.54805239706646,0,3.24736561516821,1.26679932737549,2.02209778005913,0.5709193985953,1.29468941823586,0.890652834388949,0.867426633830679,0.304465478312141,1.38369298353635,1.50722640552623,0.940709657085638,1.50799909595611,0.494389935468748,0.578397427679647,0.884610551949874,1.45590164952668,1.10420759230197,0.484875253135222,0,0.292780797011547,0.83778682725382,0.510914110417183,2.39630249011841,0,2.66847476853436,0.449371918214468,0.457500602818626,3.5183218591602,1.39059456153821,1.79000820131231,0.62336413367868,0.811206315338788,1.2220723662038,0.497627882440372,0.505445516867349,0.841767423545896,0.910843100738926,2.06911893990126,1.80062129805349,1.65775299619287,0.816437989815934,1.2811372028485,1.49922759295566,0.776110112217047,1.07783996466421,1.51284864134255,0.879755620819744,0.657587197282725,0.834141747676794,2.089512999133,0.823128545631774,0.995171334092466,3.51106593656617,1.80143534980301,3.40996199274711,2.48550927042602,2.57978665979206,2.88099298337624,2.13070262026689,0.787056926989615,1.3884040159864,1.16266972375204,2.41446061259657,1.63471479314037,1.48103864922132,1.64167464079095,0.729619285912702,1.02339991197733,1.09775057645525,0.134206418760372,0.210289948564127,2.6755199218614,0.660837565967596,0.264450566663544,1.06644125267617,1.39342003116263,1.54640953586512,1.21010114774006,0.444756087689741,1.14135375667535,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0.898819408654221,0.432276099749388,0.398282546508734,1.89667900953082,1.5994791765362,1.1270773567308,0.610953983535943,0.581857461502877,1.05203729835478,1.01178459398812,0.590440591918409,0.470996183524124,0.246794327843601,0,1.16791574001266,1.57247196090562,1.12431056192427,1.42002084971952,1.4470629585145,0.763877555344259,0.863088412352432,1.78348749452539,1.09824565275233,0,1.11642284300551,0.936113019343682,0,0.358794827043824,0.482443521363367,0.554259570499814,1.89491411770485,1.62964976442026,1.18821560042632,0.704070744865506,1.17254380209271,0.952174563544055,0.975668239288994,0.630540576424764,1.55025282754142,1.11618338060241,0.81931657357869,1.20879487306127,1.44649058581512,1.50791283939272,2.71952841909355,0.491764273019036,0.275936746304732,0.321101179975584,0.586058432961016,1.14754461763673,0.757412781613119,2.52406575533005,1.17131623288992,1.72338718186239,0,1.55959071857676,1.13230612315533,3.64329631507405,1.16902343164525,1.97643888973262,0.642642632843614,0.709700426041343,1.24645922567079,1.95464351224291,0.659880491890142,0,0.971122544619926,1.209294227859,0.377210159511796,1.18120757152309,0.922305443831782,0.516856586336442,1.81766864738753,0.356497378384721,0.948110273807448,0,1.03135543248187,1.02131881726136,0.720244376125241,0.776152102696527,1.28602221018955,0.709360934569094,2.31879462882692,1.15184314421485,0.608929898229199,1.40803024838226,0.847328283455281,0.661585194164886,0.65954501176592,0.968786560175433,1.14594557363496,1.43246812803764,0.328281799490123,0.291480836629851,0.741701208042039,0.341741761595705,1.23832120777933,1.66675074632741,0.753473828018764,1.23024804948923,0.457556346413045,1.86976272993241,1.6794174278839,1.65839968565309,1.90934123603023,0.632671987162271,1.82987520414164,1.18805874903981,0.418176592028937,1.31017538247707,0.944050424693745,0.826534557253359,1.30877970992015,1.16653475962614,0,2.81846469342095,1.19613236835183,1.65458490457098,1.16670713006429,2.0665571756437,1.18269287843545,2.11243029562357,1.3020438484395,1.67774951081137,1.69108884578204,2.01621004380506,0.632022241256357,0.810900861160657,0.924398614483445,0.909445760844565,0.358053391334963,0.993406773906324,1.32214994471966,0.443068581523732,1.41353029927407,1.143102099825,0.907435666231565,0.779663045918019,1.05833025804362,0.701261413089414,0.680191150845634,2.66383144048878,2.42227412845584,3.02192309455341,0.965947970160952,0.750729901804728,0.915758121336325,0.428736758158132,1.00314420807073,2.82375921308533,1.38097570952153,1.71868654031819,2.92150409984269,0.685082519770642,0.755393897389701,0.675022500231806,2.2516060161211,0.906284817968409,0,1.45302286617847,1.19707462020309,0.341467211508268,1.94485373654635,0.209613162627982,1.10306105070008,1.11123363900808,1.44224540067226,0.64183841918363,0.505394423527595,0,1.69763707247469,2.52832070168682,2.04880487695582,1.7230640686684,1.42888107384922,0.927074607558844,1.73618298417335,0.824171801606613,1.91358596174717,0.342869252385415,1.4198064492747,1.1921809497366,1.0174249164263,1.69396884747595,1.18460451048347,0.365855945745545,0.263069711437843,1.35804113845862,0,1.42362021749009,1.18205378850676,1.63692417267876,1.54936841185966,0.578719832943424,0.999242311751784,0.233931608445408,0.859484216193193,1.3390183244819,0.441182838239031,1.39120701372253 | |||
|short_description=p4@Mapre1 | |||
}} |
Revision as of 07:31, 4 August 2015
Short description: | p4@Mapre1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mapre1_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_NM_007896, uc008nik.1_5end |
EntrezGene: | 13589 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.31e-12 | 39 |
electrically active cell | 2.31e-12 | 39 |
neuron | 5.20e-12 | 33 |
neuronal stem cell | 5.20e-12 | 33 |
neuroblast | 5.20e-12 | 33 |
electrically signaling cell | 5.20e-12 | 33 |
ectodermal cell | 1.11e-11 | 44 |
neurectodermal cell | 1.11e-11 | 44 |
CNS neuron (sensu Vertebrata) | 2.20e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.20e-11 | 23 |
neural cell | 2.58e-11 | 43 |
stem cell | 4.25e-10 | 97 |
somatic stem cell | 3.44e-08 | 91 |
multi fate stem cell | 3.44e-08 | 91 |
embryonic cell | 1.08e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.96e-08 | 34 |