FFCP PHASE1:Mm9::chr19:5726240..5726287,-: Difference between revisions
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{{FFCP|EntrezGene=114601|HGNC=|MCL_coexpression_id=15|UniProt=E9QP49,G5E8Y6,Q99MS7|association_with_transcript=29bp_to_ENSMUST00000049295,ENSMUST00000075606,NM_001114595,NM_001114596,NM_001114597,NM_053252,uc008gev.2,uc008gew.2,uc008gex.2,uc008gey.2,uc012bhc.1_5end|description=CAGE_peak_1_at_Ehbp1l1_5end|id=chr19:5726240..5726287,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!7.53e-10!33;UBERON:0007100!1.68e-08!18;UBERON:0000948!1.68e-08!18;UBERON:0005498!1.68e-08!18;UBERON:0004140!1.68e-08!18;UBERON:0009881!1.68e-08!18;UBERON:0004141!1.68e-08!18;UBERON:0003084!1.68e-08!18;UBERON:0007005!1.68e-08!18;UBERON:0004139!1.68e-08!18;UBERON:0004291!1.68e-08!18;UBERON:0002204!9.53e-08!32;UBERON:0004535!1.18e-07!23;UBERON:0001009!1.18e-07!23;UBERON:0003081!1.77e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0004872,7.52e-10,33;UBERON:0007100,1.68e-08,18;UBERON:0000948,1.68e-08,18;UBERON:0005498,1.68e-08,18;UBERON:0004140,1.68e-08,18;UBERON:0009881,1.68e-08,18;UBERON:0004141,1.68e-08,18;UBERON:0003084,1.68e-08,18;UBERON:0007005,1.68e-08,18;UBERON:0004139,1.68e-08,18;UBERON:0004291,1.68e-08,18;UBERON:0002204,9.53e-08,32;UBERON:0004535,1.18e-07,23;UBERON:0001009,1.18e-07,23;UBERON:0003081,1.79e-07,87|phase1_expression=5.2849119544582,63.1645487827244,79.6248668931688,107.677259225231,99.1773545293767,28.0358384092856,28.2671295120586,21.0471017209769,9.43284438416167,7.72412936862578,8.56089841127525,4.22792442675283,17.462474452983,17.3092396789615,183.210368998614,184.252493324742,408.544136826838,39.4327706697797,40.5858723472987,55.595044385542,26.4484632369827,32.2695591402877,30.0379757509776,62.2370524666352,54.3699996129193,60.8685881961921,61.1682034545886,51.4976246119275,37.4346136329057,19.9103802510345,23.7251646401176,100.334846406622,103.945949101792,63.3926724061755,1.1554064790051,0.664938581433969,1.63335485009895,156.112298264867,104.698936166189,98.4224638670741,187.645844681894,187.154462878614,154.392292263907,28.9562681343828,32.7447487839032,28.4497465850606,28.1660883965294,2.8343270329458,13.4008571468028,14.1933826324227,14.1386285841616,7.18762821824858,34.395434241836,36.2681071005672,21.8460969442602,78.4641279909638,55.30095390818,61.8806510732931,0,0.528990979272033,1.26766280701236,47.7770790217476,43.5754450094458,133.185158157647,188.873475250292,162.699946322657,66.5112245350858,35.7323023949046,1.03689612308478,1.35005938331691,0.841299845405528,4.57041575046086,3.53389665522582,0.734944795289724,1.0543001812006,0,3.30347642998166,2.80912143787413,1.68967186581868,1.05509030184155,0.548925861614458,0.52091337055676,2.51264699101243,3.93933827022176,5.04234217663473,5.00868595305235,5.55249555116501,2.42319279572891,24.5352866399516,28.188191919831,27.8269909153611,16.3480536626463,0,5.39703191637817,6.49776417447669,4.48026887097336,66.2897663021869,60.1619038700544,66.2454311737315,81.9747812863989,1.97180787687353,42.3477375467249,35.6727335589304,35.5533351576666,25.5459428393233,23.5624674891842,23.7596489156948,22.4942243046548,30.5546702703663,23.1569736941127,21.1652098654686,28.6197549613413,30.9024766323118,24.1156224884196,24.5760397913623,20.7349875693965,26.6970565153124,47.1393903558912,133.576193344431,148.663735101669,183.740143359047,150.796203725054,35.4144346314432,1.75668478206928,2.93225389538837,57.4778374219331,24.5621005237137,20.9965955847693,25.9223263229052,2.84602214869163,3.20250421973039,1.38219787324151,2.60736480288415,2.55715457330331,3.74018480207208,3.40706652442291,26.9874314203338,108.109657460171,7.83440551144392,11.5743020737561,3.6433724029557,6.20735681970377,10.6236656585156,17.3310540511072,14.0835553243249,15.1174189936123,12.6497328155634,21.2136764005993,6.03590380211958,6.80781888604149,10.0292140773451,18.8508329887714,14.7365042089567,43.5315208152708,25.9285491874009,8.95654200683219,21.066395619397,21.3598762905214,29.8371674365372,73.3225234775677,75.517391313913,70.4042660312568,93.0406810849876,96.8080020197227,88.8578570231299,96.7341210161697,123.674038045224,112.094728672483,133.293478429919,106.544684187333,114.712365507386,138.74378806664,137.657922287489,116.491171484003,2.73376933133365,2.57261530948211,133.158769542471,46.8077502994473,8.31824177087412,23.9203772016252,28.0931065682163,32.8744145136048,40.4728039797664,49.8391140414905,65.0104814315981,59.7857205648159,62.8338022000674,57.6973768919337,62.1935437909993,51.2327062932906,51.8731319699266,70.2968694587916,8.15571974098251,15.994791765362,10.1436962105772,12.0154283428735,12.2190066915604,12.6945834001477,12.0149420536089,12.5468625782662,15.071877872772,13.0800993757109,8.89357881261447,111.118840406919,110.073037263394,161.900720917095,187.848472405754,176.300503779017,138.261837517311,102.419824932489,52.5318134751115,53.814036984864,58.9449646762154,33.8648262378338,17.4741096944154,12.1237861414614,12.9166137735777,6.75420929908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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:114601 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QP49,uniprot:G5E8Y6,uniprot:Q99MS7 | |||
|association_with_transcript=29bp_to_ENSMUST00000049295,ENSMUST00000075606,NM_001114595,NM_001114596,NM_001114597,NM_053252,uc008gev.2,uc008gew.2,uc008gex.2,uc008gey.2,uc012bhc.1_5end | |||
|cluster_id=chr19:5726240..5726287,- | |||
|description=CAGE_peak_1_at_Ehbp1l1_5end | |||
|id=chr19:5726240..5726287,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.53e-10!33;UBERON:0007100!1.68e-08!18;UBERON:0000948!1.68e-08!18;UBERON:0005498!1.68e-08!18;UBERON:0004140!1.68e-08!18;UBERON:0009881!1.68e-08!18;UBERON:0004141!1.68e-08!18;UBERON:0003084!1.68e-08!18;UBERON:0007005!1.68e-08!18;UBERON:0004139!1.68e-08!18;UBERON:0004291!1.68e-08!18;UBERON:0002204!9.53e-08!32;UBERON:0004535!1.18e-07!23;UBERON:0001009!1.18e-07!23;UBERON:0003081!1.77e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,7.52e-10,33;UBERON:0007100,1.68e-08,18;UBERON:0000948,1.68e-08,18;UBERON:0005498,1.68e-08,18;UBERON:0004140,1.68e-08,18;UBERON:0009881,1.68e-08,18;UBERON:0004141,1.68e-08,18;UBERON:0003084,1.68e-08,18;UBERON:0007005,1.68e-08,18;UBERON:0004139,1.68e-08,18;UBERON:0004291,1.68e-08,18;UBERON:0002204,9.53e-08,32;UBERON:0004535,1.18e-07,23;UBERON:0001009,1.18e-07,23;UBERON:0003081,1.79e-07,87 | |||
|phase1_expression=5.2849119544582,63.1645487827244,79.6248668931688,107.677259225231,99.1773545293767,28.0358384092856,28.2671295120586,21.0471017209769,9.43284438416167,7.72412936862578,8.56089841127525,4.22792442675283,17.462474452983,17.3092396789615,183.210368998614,184.252493324742,408.544136826838,39.4327706697797,40.5858723472987,55.595044385542,26.4484632369827,32.2695591402877,30.0379757509776,62.2370524666352,54.3699996129193,60.8685881961921,61.1682034545886,51.4976246119275,37.4346136329057,19.9103802510345,23.7251646401176,100.334846406622,103.945949101792,63.3926724061755,1.1554064790051,0.664938581433969,1.63335485009895,156.112298264867,104.698936166189,98.4224638670741,187.645844681894,187.154462878614,154.392292263907,28.9562681343828,32.7447487839032,28.4497465850606,28.1660883965294,2.8343270329458,13.4008571468028,14.1933826324227,14.1386285841616,7.18762821824858,34.395434241836,36.2681071005672,21.8460969442602,78.4641279909638,55.30095390818,61.8806510732931,0,0.528990979272033,1.26766280701236,47.7770790217476,43.5754450094458,133.185158157647,188.873475250292,162.699946322657,66.5112245350858,35.7323023949046,1.03689612308478,1.35005938331691,0.841299845405528,4.57041575046086,3.53389665522582,0.734944795289724,1.0543001812006,0,3.30347642998166,2.80912143787413,1.68967186581868,1.05509030184155,0.548925861614458,0.52091337055676,2.51264699101243,3.93933827022176,5.04234217663473,5.00868595305235,5.55249555116501,2.42319279572891,24.5352866399516,28.188191919831,27.8269909153611,16.3480536626463,0,5.39703191637817,6.49776417447669,4.48026887097336,66.2897663021869,60.1619038700544,66.2454311737315,81.9747812863989,1.97180787687353,42.3477375467249,35.6727335589304,35.5533351576666,25.5459428393233,23.5624674891842,23.7596489156948,22.4942243046548,30.5546702703663,23.1569736941127,21.1652098654686,28.6197549613413,30.9024766323118,24.1156224884196,24.5760397913623,20.7349875693965,26.6970565153124,47.1393903558912,133.576193344431,148.663735101669,183.740143359047,150.796203725054,35.4144346314432,1.75668478206928,2.93225389538837,57.4778374219331,24.5621005237137,20.9965955847693,25.9223263229052,2.84602214869163,3.20250421973039,1.38219787324151,2.60736480288415,2.55715457330331,3.74018480207208,3.40706652442291,26.9874314203338,108.109657460171,7.83440551144392,11.5743020737561,3.6433724029557,6.20735681970377,10.6236656585156,17.3310540511072,14.0835553243249,15.1174189936123,12.6497328155634,21.2136764005993,6.03590380211958,6.80781888604149,10.0292140773451,18.8508329887714,14.7365042089567,43.5315208152708,25.9285491874009,8.95654200683219,21.066395619397,21.3598762905214,29.8371674365372,73.3225234775677,75.517391313913,70.4042660312568,93.0406810849876,96.8080020197227,88.8578570231299,96.7341210161697,123.674038045224,112.094728672483,133.293478429919,106.544684187333,114.712365507386,138.74378806664,137.657922287489,116.491171484003,2.73376933133365,2.57261530948211,133.158769542471,46.8077502994473,8.31824177087412,23.9203772016252,28.0931065682163,32.8744145136048,40.4728039797664,49.8391140414905,65.0104814315981,59.7857205648159,62.8338022000674,57.6973768919337,62.1935437909993,51.2327062932906,51.8731319699266,70.2968694587916,8.15571974098251,15.994791765362,10.1436962105772,12.0154283428735,12.2190066915604,12.6945834001477,12.0149420536089,12.5468625782662,15.071877872772,13.0800993757109,8.89357881261447,111.118840406919,110.073037263394,161.900720917095,187.848472405754,176.300503779017,138.261837517311,102.419824932489,52.5318134751115,53.814036984864,58.9449646762154,33.8648262378338,17.4741096944154,12.1237861414614,12.9166137735777,6.75420929908714,41.5694677874861,19.5176154123599,15.6446377384345,14.2585872051158,16.1936271319066,19.4307258632506,21.4239276797412,29.2700471786698,34.5220965592558,29.4548037232871,22.0047580747332,34.0835694608735,42.998560484608,32.5460381808401,98.014334560527,140.871572109046,24.5882136509518,17.9358885098076,3.37156238974363,2.34423373184406,20.3279332267078,316.093600859875,4.10160685241134,5.85658116444958,4.52389135238878,5.25731355495614,7.5751549188014,4.81230102341015,6.07216052512342,8.47541987942804,7.51046778098395,1.60660658210904,28.2460769564455,22.0801348547396,21.3381916753185,51.9655887363487,6.63725691699814,8.98288353773431,7.86041248108353,10.5618844663303,15.9463022155617,16.908933136916,37.4721025093921,15.6319503675327,25.6678112436999,12.009396801561,15.8127912862498,12.3762651897824,1.70219802876894,3.6012218806262,6.33857550535497,7.93047029616891,5.67488747655275,6.95638388648075,6.41741180348272,8.52501857520878,22.2938122660525,12.921756322693,16.5396298541221,37.7589519235989,30.6782410722221,26.3567481936041,23.1582347366085,14.7726809770555,71.9957666475731,3.8939313422207,154.809018002855,49.9456220470998,85.5598716448068,244.690625649094,208.185308819121,209.332028483968,30.596117398894,30.7893195112048,32.2005938964307,37.2321541025894,11.0717597753397,34.1576704773106,31.861575542431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| |||
|short_description=p1@Ehbp1l1 | |||
}} |
Revision as of 09:43, 4 August 2015
Short description: | p1@Ehbp1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ehbp1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 29bp_to_ENSMUST00000049295, ENSMUST00000075606, NM_001114595, NM_001114596, NM_001114597, NM_053252, uc008gev.2, uc008gew.2, uc008gex.2, uc008gey.2, uc012bhc.1_5end |
EntrezGene: | 114601 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 7.52e-10 | 33 |
primary circulatory organ | 1.68e-08 | 18 |
heart | 1.68e-08 | 18 |
primitive heart tube | 1.68e-08 | 18 |
primary heart field | 1.68e-08 | 18 |
anterior lateral plate mesoderm | 1.68e-08 | 18 |
heart tube | 1.68e-08 | 18 |
heart primordium | 1.68e-08 | 18 |
cardiac mesoderm | 1.68e-08 | 18 |
cardiogenic plate | 1.68e-08 | 18 |
heart rudiment | 1.68e-08 | 18 |
musculoskeletal system | 9.53e-08 | 32 |
cardiovascular system | 1.18e-07 | 23 |
circulatory system | 1.18e-07 | 23 |
lateral plate mesoderm | 1.79e-07 | 87 |