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FFCP PHASE1:Mm9::chr3:98084350..98084367,+: Difference between revisions

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{{FFCP|EntrezGene=15360|HGNC=|MCL_coexpression_id=1375|UniProt=P54869|association_with_transcript=0bp_to_ENSMUST00000090746,ENSMUST00000120541,NM_008256,uc008qpr.2_5end|description=CAGE_peak_1_at_Hmgcs2_5end|id=chr3:98084350..98084367,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!7.87e-13!23;UBERON:0009856!7.87e-13!23;UBERON:0002107!3.86e-12!22;UBERON:0007499!3.86e-12!22;UBERON:0006925!3.86e-12!22;UBERON:0009497!3.86e-12!22;UBERON:0000015!3.86e-12!22;UBERON:0002423!3.86e-12!22;UBERON:0006235!3.86e-12!22;UBERON:0008835!3.86e-12!22;UBERON:0003894!3.86e-12!22;UBERON:0004161!3.86e-12!22;UBERON:0008836!3.86e-12!22;UBERON:0005409!4.51e-11!59;UBERON:0000160!4.98e-11!43;UBERON:0002365!1.00e-09!25;UBERON:0002330!1.00e-09!25;UBERON:0001007!1.55e-09!128;UBERON:0001555!1.55e-09!128;UBERON:0007026!1.55e-09!128;UBERON:0004119!3.47e-09!130;UBERON:0000925!3.47e-09!130;UBERON:0006595!3.47e-09!130;UBERON:0004921!3.85e-09!126;UBERON:0004185!3.85e-09!126;UBERON:0000466!4.95e-08!79;UBERON:0005172!6.38e-08!49;UBERON:0005173!6.38e-08!49;UBERON:0002417!6.38e-08!49;UBERON:0000916!6.38e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0009854,7.17e-13,23;UBERON:0009856,7.17e-13,23;UBERON:0002107,3.54e-12,22;UBERON:0007499,3.54e-12,22;UBERON:0006925,3.54e-12,22;UBERON:0009497,3.54e-12,22;UBERON:0000015,3.54e-12,22;UBERON:0002423,3.54e-12,22;UBERON:0006235,3.54e-12,22;UBERON:0008835,3.54e-12,22;UBERON:0003894,3.54e-12,22;UBERON:0004161,3.54e-12,22;UBERON:0008836,3.54e-12,22;UBERON:0000160,3.45e-10,31;UBERON:0005409,7.73e-10,47;UBERON:0002365,9.37e-10,25;UBERON:0002330,9.37e-10,25;UBERON:0001007,2.50e-08,116;UBERON:0001555,2.50e-08,116;UBERON:0007026,2.50e-08,116;UBERON:0004119,5.47e-08,118;UBERON:0000925,5.47e-08,118;UBERON:0006595,5.47e-08,118;UBERON:0004921,5.86e-08,114;UBERON:0005172,6.05e-08,49;UBERON:0005173,6.05e-08,49;UBERON:0002417,6.05e-08,49;UBERON:0000916,6.05e-08,49|phase1_expression=49.6461426024861,146.220695800892,183.819692713373,49.906594865627,28.5510566069418,448.405535276658,390.833947716314,0,0,0,0,0,0,0,0.666219523631325,1.82227740650843,1.39912375625629,0.157731082679119,0,0,81.7266018351781,0.0992909512008853,0.261199789138935,114.554574720079,80.5226576545767,191.793476014417,242.949765833718,384.400679111626,124.465339743925,43.3491823187081,293.792926618279,0,0,0,413.346667864074,128.333146216756,87.7928231928187,0,0,0,0,0,0,5.03587271902309,3.4468156614635,0.183546752161682,157.260660213956,14.8257106338704,5.27246838562732,4.27745777963423,26.3174472655682,7.18762821824858,0.167782606057736,0,0,0.257259436035947,18.9112070359579,10.8291139378263,9.91350658212029,14.2827564403449,20.9164363157039,0.338844532069132,5.33576877666684,0,0,0.7104801149461,8.98800331555214,11.9107674649682,4.45865332926454,7.96535036156975,6.30974884054146,24.5659846587271,25.8416192913388,4.89963196859816,5.271500906003,10.1114066527102,3.30347642998166,5.49055553766307,5.06901559745603,7.78129097608144,14.5465353327831,11.9810075228055,10.3297709630511,12.380777420697,10.5430790965999,26.5165726926301,29.4709379254143,16.0303523409758,0.37863096666592,3.02286240427142,67.8282903561926,1642.54918115747,1347.02321207505,3226.34567961087,2824.57808664502,3093.17762852,1169.90201969749,0,0,0,195.490666650033,0,0,0,0,0,0,2257.52948592553,84.6726879526252,28.797774978576,14.5727674483554,39.2760467022662,74.950036608219,44.9153468846815,117.000763600026,18.975655290781,69.4617859333591,30.0766662393416,1.76922110389975,3.558870698843,1.98757366614354,1.93950101254089,3437.06407686217,7.90508151931177,15.0801628905688,21.2029355823131,0.239630249011841,0.599902730993408,0.254140454146129,11.3840885947665,11.8950156732843,21.3612398591869,7.64827008846016,18.9229438424445,9.55825004973976,17.8465389374533,37.3750465330661,24.134952298358,18.4487613656583,347.649945924455,0.910843100738926,0.459804208866946,1.0803727788321,23.3592467645358,7.00775941258677,10.8896662242122,10.9631017734883,256.375040402365,1.29340795759705,1.70195472151037,0.351902248327898,0.657587197282725,0.834141747676794,4.179025998266,5.55611768301447,52.1469779064452,0,0.257347907114715,0,11.3919174894526,17.5894544985822,14.5850269783422,18.7028341112316,7.28027657465394,7.0962871928194,5.8133486187602,4.56064782379353,27.3230901139177,327.474101327826,122.797263131163,57.6399235871034,134.796388406156,11.6361561104257,34.4910496214155,4.83666881697493,30.8713837137853,30.0681092515256,317.07622942959,7.46508876873319,11.6118335930219,66.1090076582339,500.578508115136,784.994494772392,924.306317280925,233.4682982799,1744.9854253009,1548.72755662726,1853.6774500074,1422.06805144686,226.502490980864,328.313697759661,514.979332635794,5.12103332573321,12.224590849241,7.88954149711563,9.57161240872977,9.11576689687841,31.1403040313014,198.436253495919,107.60779787713,46.6286221688883,303.186831755864,3233.40880363953,32.3679505089222,46.9775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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:15360
|HGNC=
|MCL_coexpression_id=1375
|TSSclassifier=NA
|UniProt=uniprot:P54869
|association_with_transcript=0bp_to_ENSMUST00000090746,ENSMUST00000120541,NM_008256,uc008qpr.2_5end
|cluster_id=chr3:98084350..98084367,+
|description=CAGE_peak_1_at_Hmgcs2_5end
|id=chr3:98084350..98084367,+
|ontology_enrichment_celltype=
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|ontology_enrichment_disease=
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|ontology_enrichment_uberon_v019_2=UBERON:0009854,7.17e-13,23;UBERON:0009856,7.17e-13,23;UBERON:0002107,3.54e-12,22;UBERON:0007499,3.54e-12,22;UBERON:0006925,3.54e-12,22;UBERON:0009497,3.54e-12,22;UBERON:0000015,3.54e-12,22;UBERON:0002423,3.54e-12,22;UBERON:0006235,3.54e-12,22;UBERON:0008835,3.54e-12,22;UBERON:0003894,3.54e-12,22;UBERON:0004161,3.54e-12,22;UBERON:0008836,3.54e-12,22;UBERON:0000160,3.45e-10,31;UBERON:0005409,7.73e-10,47;UBERON:0002365,9.37e-10,25;UBERON:0002330,9.37e-10,25;UBERON:0001007,2.50e-08,116;UBERON:0001555,2.50e-08,116;UBERON:0007026,2.50e-08,116;UBERON:0004119,5.47e-08,118;UBERON:0000925,5.47e-08,118;UBERON:0006595,5.47e-08,118;UBERON:0004921,5.86e-08,114;UBERON:0005172,6.05e-08,49;UBERON:0005173,6.05e-08,49;UBERON:0002417,6.05e-08,49;UBERON:0000916,6.05e-08,49
|phase1_expression=49.6461426024861,146.220695800892,183.819692713373,49.906594865627,28.5510566069418,448.405535276658,390.833947716314,0,0,0,0,0,0,0,0.666219523631325,1.82227740650843,1.39912375625629,0.157731082679119,0,0,81.7266018351781,0.0992909512008853,0.261199789138935,114.554574720079,80.5226576545767,191.793476014417,242.949765833718,384.400679111626,124.465339743925,43.3491823187081,293.792926618279,0,0,0,413.346667864074,128.333146216756,87.7928231928187,0,0,0,0,0,0,5.03587271902309,3.4468156614635,0.183546752161682,157.260660213956,14.8257106338704,5.27246838562732,4.27745777963423,26.3174472655682,7.18762821824858,0.167782606057736,0,0,0.257259436035947,18.9112070359579,10.8291139378263,9.91350658212029,14.2827564403449,20.9164363157039,0.338844532069132,5.33576877666684,0,0,0.7104801149461,8.98800331555214,11.9107674649682,4.45865332926454,7.96535036156975,6.30974884054146,24.5659846587271,25.8416192913388,4.89963196859816,5.271500906003,10.1114066527102,3.30347642998166,5.49055553766307,5.06901559745603,7.78129097608144,14.5465353327831,11.9810075228055,10.3297709630511,12.380777420697,10.5430790965999,26.5165726926301,29.4709379254143,16.0303523409758,0.37863096666592,3.02286240427142,67.8282903561926,1642.54918115747,1347.02321207505,3226.34567961087,2824.57808664502,3093.17762852,1169.90201969749,0,0,0,195.490666650033,0,0,0,0,0,0,2257.52948592553,84.6726879526252,28.797774978576,14.5727674483554,39.2760467022662,74.950036608219,44.9153468846815,117.000763600026,18.975655290781,69.4617859333591,30.0766662393416,1.76922110389975,3.558870698843,1.98757366614354,1.93950101254089,3437.06407686217,7.90508151931177,15.0801628905688,21.2029355823131,0.239630249011841,0.599902730993408,0.254140454146129,11.3840885947665,11.8950156732843,21.3612398591869,7.64827008846016,18.9229438424445,9.55825004973976,17.8465389374533,37.3750465330661,24.134952298358,18.4487613656583,347.649945924455,0.910843100738926,0.459804208866946,1.0803727788321,23.3592467645358,7.00775941258677,10.8896662242122,10.9631017734883,256.375040402365,1.29340795759705,1.70195472151037,0.351902248327898,0.657587197282725,0.834141747676794,4.179025998266,5.55611768301447,52.1469779064452,0,0.257347907114715,0,11.3919174894526,17.5894544985822,14.5850269783422,18.7028341112316,7.28027657465394,7.0962871928194,5.8133486187602,4.56064782379353,27.3230901139177,327.474101327826,122.797263131163,57.6399235871034,134.796388406156,11.6361561104257,34.4910496214155,4.83666881697493,30.8713837137853,30.0681092515256,317.07622942959,7.46508876873319,11.6118335930219,66.1090076582339,500.578508115136,784.994494772392,924.306317280925,233.4682982799,1744.9854253009,1548.72755662726,1853.6774500074,1422.06805144686,226.502490980864,328.313697759661,514.979332635794,5.12103332573321,12.224590849241,7.88954149711563,9.57161240872977,9.11576689687841,31.1403040313014,198.436253495919,107.60779787713,46.6286221688883,303.186831755864,3233.40880363953,32.3679505089222,46.9775998320555,96.915570437872,181.965528885487,458.960135008849,1064.33606044633,1785.72992515718,3194.0639674682,3271.39923813599,3112.58167131723,5183.55126007458,3953.51731836148,3065.29726276615,2360.51116712132,2141.56679133199,36.3963784628211,5.68474235311454,1.79261474086228,2.37643120085263,2.58159273117352,7.87279409976534,23.5663204477154,27.9041116436652,37.2018940090611,38.0919266195893,15.7860220970912,11.3065687153859,10.3610989119537,39.6338420513342,0,0,3.93411418415229,9.65778612066564,9.31193421929193,17.3473296156461,0,6.5642441073137,5.04813151066011,0,0.215423397732799,0.477937595905104,1.78238939265915,5.09537755419898,3.64329631507405,0.292255857911312,0,43.0570564005221,360.243936258586,124.289791359744,75.2537752213521,73.5766748457508,25.2215762845929,14.0812768969889,30.8370028104046,61.4852560004228,37.5033403958581,35.3550420135517,441.395524731322,273.013830837607,247.052683220612,96.3912111704239,15.8127912862498,66.0067476788396,33.703520969625,4.68158844481407,7.50280365939976,8.3591443662321,15.9606210278046,29.0741172691375,25.1760001521245,61.5019197211491,3.52007562095566,17.3702298108333,28.0071065529802,20.281009111802,67.4921303588885,13.2085305592661,27.6943838087277,20.1893306686425,677.109983491143,10.0129663085675,22.2132145037208,11.3512777379772,6.85219751267933,15.0694765603753,13.5327285443815,8.69357058184786,0,0.279902904647316,0.276399947608848,63.0082607889975,6.01038387804157,19.9253077784312,87.1603100431936,75.4808748612232,176.000226379419,576.545080795109,925.553397212312,38.4781234716524,3760.90806503466,6.83473244395618,188.27344152052,47.9948112801172,31.9334886582198,24.1119473546619,32.4191156929105,48.9972763923257,88.72207241619,138.537465473963,119.225074612033,123.207901621263,201.332974374248,10.7443781013581,11.5553372715394,11.8117600739551,17.2794694560467,17.3655894797457,16.490552446845,23.6785035554339,22.005739549012,27.8667401856887,40.0085734938749,23.1900225814733,11.012740523592,7.60073548958603,17.1809046206906,4.53460767230423,0,0,0,105.86789752964,48.9851260927585,51.6487580433688,18.6500489798787,43.1352009470412,14.1187960654267,12.4287813856938,10.8850147553485,15.1230800462445,4.7955776383945,2.2661816921691,6.07520250208625,6.75481804836331,7.25027854374727,5.1776031175182,2.07574695168353,10.3746467084268,9.04888110496911,45.460956091771,56.3859407469272,161.782287436012,135.792750686787,149.169381440959,142.809048268358,126.095908670135,154.368893633156,129.209043849462,121.640318203377,124.016720208232,123.773435599347,119.549716512051,110.205993973558,117.288806041933,105.081904704843,107.602410618244,125.833015625447,110.389951431108,113.972498794819,133.428010468478,122.906850822422,124.552702816548,138.110619518943,125.484252355851,121.544681892046,167.220396954006,112.347362163593,116.038280238414,120.313926691889,116.512504571846,164.356432555932,10.2422336954558,312.532628883066,483.674742662719,21.0417165275728,53.6037148460423,15.7670128221887
|short_description=p1@Hmgcs2
}}

Revision as of 10:08, 4 August 2015

Short description:p1@Hmgcs2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hmgcs2_5end
Coexpression cluster:MCL_coexpression_mm9:1375
Association with transcript: 0bp_to_ENSMUST00000090746, ENSMUST00000120541, NM_008256, uc008qpr.2_5end
EntrezGene:15360
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hmgcs2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G749.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5146.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6183.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I349.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I428.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7448.41
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8390.83
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A381.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1114.55
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D280.52
GP2+ M cell, pool1.CNhs13228.11845-124H9191.79
GP2+ M cell, pool2.CNhs13231.11846-124I1242.95
GP2+ M cell, pool3.CNhs13240.11847-124I2384.40
Ileum epithelium, pool1.CNhs13199.10252-104B9124.47
Ileum epithelium, pool2.CNhs13232.10253-104C143.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8293.79
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5413.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6128.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F787.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.45
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7157.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C426.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C88.99
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.84
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.52
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G367.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71642.55
Mouse hepatocyte, donor1.CNhs13078.11714-123C41347.02
Mouse hepatocyte, donor3.CNhs12615.11637-122C83226.35
Mouse hepatocyte, donor6.CNhs13090.11822-124F42824.58
Mouse hepatocyte, donor8.CNhs13091.11824-124F63093.18
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71169.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6195.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62257.53
accessory axillary lymph node, adult.CNhs10475.1063-29H984.67
adrenal gland, adult.CNhs10508.49-24D728.80
adrenal gland, embryo E14.CNhs11038.406-44C514.57
adrenal gland, embryo E16.CNhs11004.1254-43D639.28
adrenal gland, embryo E17.CNhs11043.1263-45I174.95
adrenal gland, embryo E18.CNhs11026.1262-18F544.92
adrenal gland, neonate N00.CNhs11191.1311-23C1117.00
adrenal gland, neonate N25.CNhs11223.1377-27I318.98
amnion, adult pregnant day17.5.CNhs10488.583-22A869.46
aorta, adult.CNhs10498.46-23H130.08
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43437.06
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I215.08
colon, adult.CNhs10468.36-18H721.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A411.38
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F121.36
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F218.92
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B217.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B137.38
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.13
epididymis, adult.CNhs10490.58-23B218.45
eyeball, adult.CNhs10484.31-12G4347.65
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D423.36
eyeball, neonate N00.CNhs11207.633-15C67.01
eyeball, neonate N01.CNhs11140.1532-43E710.89
eyeball, neonate N02.CNhs11205.1551-44G810.96
eyeball, neonate N16.CNhs11188.777-19A2256.38
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B55.56
gonad, embryo E13.CNhs11044.1564-45I652.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E911.39
heart, embryo E12.CNhs11015.353-12F517.59
heart, embryo E13.CNhs11013.376-3I914.59
heart, embryo E14.CNhs10597.403-26D418.70
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C67.10
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E327.32
heart, neonate N03.CNhs11221.1349-25I2327.47
heart, neonate N10.CNhs11118.749-24G1122.80
heart, neonate N16.CNhs11209.782-15G157.64
heart, neonate N20.CNhs11127.821-26I6134.80
heart, neonate N25.CNhs11196.1351-25D311.64
heart, neonate N30.CNhs11202.1390-42D234.49
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G130.87
intestinal mucosa, adult.CNhs10506.860-29I330.07
intestine, adult.CNhs10496.178-9A3317.08
intestine, embryo E12.CNhs11019.1251-16I57.47
intestine, embryo E13.CNhs11010.381-16D511.61
intestine, embryo E15.CNhs10602.976-16D866.11
intestine, embryo E16.CNhs10585.463-22H4500.58
intestine, embryo E17.CNhs10582.482-18D3784.99
intestine, embryo E18.CNhs10526.1289-20F7924.31
intestine, neonate N00.CNhs11126.644-26D1233.47
intestine, neonate N01.CNhs11192.1322-23E91744.99
intestine, neonate N06.CNhs11102.688-20B81548.73
intestine, neonate N07.CNhs11095.720-20F21853.68
intestine, neonate N10.CNhs11098.755-23A51422.07
intestine, neonate N20.CNhs11187.827-18D1226.50
intestine, neonate N25.CNhs11121.1352-25E3328.31
intestine, neonate N30.CNhs11131.1384-42G1514.98
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F812.22
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I29.57
kidney, embryo E18.CNhs11001.1288-20C79.12
kidney, neonate N00.CNhs11214.646-21G731.14
kidney, neonate N10.CNhs11206.758-6D5198.44
kidney, neonate N20.CNhs11113.832-19I1107.61
kidney, neonate N25.CNhs11122.1353-25F346.63
kidney, neonate N30.CNhs11203.1385-42H1303.19
liver, adult pregnant day01.CNhs10466.508-5B23233.41
liver, embryo E12.CNhs10601.355-15F832.37
liver, embryo E13.CNhs10524.378-3H646.98
liver, embryo E14.CNhs10594.409-16E196.92
liver, embryo E15.CNhs10520.433-16D7181.97
liver, embryo E16.CNhs10523.462-17F5458.96
liver, embryo E17.CNhs10510.481-18A31064.34
liver, embryo E18.CNhs10579.499-43G41785.73
liver, neonate N00.CNhs11117.641-24F43194.06
liver, neonate N03.CNhs11123.1345-25G23271.40
liver, neonate N06.CNhs11101.684-20A83112.58
liver, neonate N07.CNhs11103.716-20H25183.55
liver, neonate N10.CNhs11115.751-24B93953.52
liver, neonate N20.CNhs11220.823-25A33065.30
liver, neonate N25.CNhs11198.1368-26H12360.51
liver, neonate N30.CNhs11106.1382-42D12141.57
lung, adult.CNhs10474.28-22B136.40
lung, embryo E12.CNhs10522.354-16G25.68
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I623.57
lung, neonate N00.CNhs11224.640-42C627.90
lung, neonate N06.CNhs11212.683-20E537.20
lung, neonate N07.CNhs11111.715-19A338.09
lung, neonate N10.CNhs11219.750-23E615.79
lung, neonate N20.CNhs11109.822-18A411.31
lung, neonate N25.CNhs11119.1359-25C710.36
lung, neonate N30.CNhs11133.1394-42H239.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H29.66
medulla oblongata, adult.CNhs10477.17-12C29.31
medulla oblongata, neonate N30.CNhs11200.1396-42A317.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I943.06
ovary, adult.CNhs10507.91-2I7360.24
ovary, embryo E18.CNhs11040.505-44H7124.29
ovary, neonate N00.CNhs11217.1299-22I475.25
oviduct, adult pregnant day01.CNhs10500.988-6G673.58
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F414.08
pancreas, embryo E15.CNhs11042.1556-45F230.84
pancreas, embryo E16.CNhs11003.460-26E561.49
pancreas, embryo E17.CNhs10599.1558-45G337.50
pancreas, embryo E18.CNhs10580.1535-43I735.36
pancreas, neonate N00.CNhs11105.645-26G9441.40
pancreas, neonate N01.CNhs11138.1531-43D7273.01
pancreas, neonate N02.CNhs11139.1539-43D8247.05
pancreas, neonate N16.CNhs11136.787-43B696.39
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H566.01
pituitary gland, adult.CNhs10493.21-1G833.70
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C77.50
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B915.96
pituitary gland, embryo E16.CNhs11036.449-43F629.07
pituitary gland, embryo E17.CNhs11039.1265-44F525.18
pituitary gland, neonate N00.CNhs11190.1308-22E961.50
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G317.37
prostate, adult.CNhs10470.859-1F828.01
skin, adult.CNhs10492.30-1C320.28
skin, neonate N00.CNhs11124.650-25G467.49
skin, neonate N03.CNhs11215.662-22H313.21
skin, neonate N06.CNhs11097.693-20I527.69
skin, neonate N10.CNhs11108.762-6C420.19
small intestine, neonate N16.CNhs11114.790-21I1677.11
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G222.21
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D115.07
spleen, neonate N20.CNhs11112.824-19H113.53
spleen, neonate N25.CNhs11099.1354-25G38.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H663.01
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G819.93
stomach, embryo E16.CNhs11022.459-17D487.16
stomach, embryo E17.CNhs11006.1035-18D575.48
stomach, embryo E18.CNhs10999.1286-20C6176.00
stomach, neonate N03.CNhs11193.1340-24B8576.55
stomach, neonate N07.CNhs11210.718-18A9925.55
stomach, neonate N25.CNhs11104.1355-25E438.48
stomach, neonate N30.CNhs11134.1386-42I13760.91
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G5188.27
testis, embryo E13.CNhs11031.389-23F547.99
testis, embryo E15.CNhs11034.443-27C531.93
testis, embryo E16.CNhs11033.470-26G524.11
testis, embryo E17.CNhs11029.486-18I532.42
testis, embryo E18.CNhs11027.503-18G549.00
testis, neonate N00.CNhs11189.1300-22B788.72
testis, neonate N07.CNhs11222.726-26I4138.54
testis, neonate N10.CNhs11204.763-44D9119.23
testis, neonate N20.CNhs11110.839-18H3123.21
testis, neonate N30.CNhs11130.1391-42E2201.33
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I411.56
thymus, embryo E15.CNhs11005.430-45I211.81
thymus, embryo E16.CNhs11002.456-26C517.28
thymus, embryo E17.CNhs10581.478-18C117.37
thymus, embryo E18.CNhs10595.1273-19G416.49
thymus, neonate N02.CNhs11181.1541-43F823.68
thymus, neonate N03.CNhs11137.2104-43C722.01
thymus, neonate N06.CNhs11197.681-26C427.87
thymus, neonate N07.CNhs11211.713-19D340.01
thymus, neonate N10.CNhs11194.748-24E423.19
thymus, neonate N20.CNhs11186.820-7A211.01
thymus, neonate N25.CNhs11125.1362-25G77.60
thymus, neonate N30.CNhs11132.1393-42G217.18
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E4105.87
uterus, adult pregnant day19.CNhs10497.590-15F548.99
uterus, adult.CNhs10509.92-27E551.65
vagina, adult.CNhs10502.89-27D518.65
vesicular gland, adult.CNhs10491.51-27F843.14
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H29.05
whole body, embryo E14.5.CNhs10578.420-27D245.46
whole body, embryo E14.CNhs10519.395-14B156.39
whole body, embryo E16.CNhs10514.453-14F2161.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5135.79
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5149.17
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5142.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5126.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5154.37
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5129.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5121.64
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5124.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5123.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5119.55
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5110.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5117.29
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5105.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5107.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5125.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5110.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5113.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5133.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5122.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5124.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5138.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5125.48
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5121.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5167.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5112.35
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5116.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5120.31
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5116.51
whole body, embryo E17.5.CNhs10513.490-9F9164.36
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B3312.53
whole body, neonate N00.CNhs10525.657-19C2483.67
whole body, neonate N01.CNhs10576.659-23C621.04
whole body, neonate N06.CNhs10515.692-21D153.60
whole body, neonate N10.CNhs10518.761-6B415.77





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum7.17e-1323
sac7.17e-1323
liver3.54e-1222
epithelial sac3.54e-1222
digestive gland3.54e-1222
epithelium of foregut-midgut junction3.54e-1222
anatomical boundary3.54e-1222
hepatobiliary system3.54e-1222
foregut-midgut junction3.54e-1222
hepatic diverticulum3.54e-1222
liver primordium3.54e-1222
septum transversum3.54e-1222
liver bud3.54e-1222
intestine3.45e-1031
gastrointestinal system7.73e-1047
exocrine gland9.37e-1025
exocrine system9.37e-1025
digestive system2.50e-08116
digestive tract2.50e-08116
primitive gut2.50e-08116
endoderm-derived structure5.47e-08118
endoderm5.47e-08118
presumptive endoderm5.47e-08118
subdivision of digestive tract5.86e-08114
abdomen element6.05e-0849
abdominal segment element6.05e-0849
abdominal segment of trunk6.05e-0849
abdomen6.05e-0849
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