FFCP PHASE1:Mm9::chr9:103382554..103382593,-: Difference between revisions
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{{FFCP|EntrezGene=107993|HGNC=|MCL_coexpression_id=57|UniProt=Q6NVD9|association_with_transcript=64bp_to_ENSMUST00000124310,NM_001002896,uc009rgv.1_5end|description=CAGE_peak_1_at_Bfsp2_5end|id=chr9:103382554..103382593,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.74e-14!63;UBERON:0002346!2.31e-13!71;UBERON:0003075!2.31e-13!71;UBERON:0007284!2.31e-13!71;UBERON:0000970!7.22e-13!9;UBERON:0000019!7.22e-13!9;UBERON:0000047!7.22e-13!9;UBERON:0004088!7.22e-13!9;UBERON:0002104!7.22e-13!9;UBERON:0001456!7.22e-13!9;UBERON:0003072!7.22e-13!9;UBERON:0003071!7.22e-13!9;UBERON:0004128!7.22e-13!9;UBERON:0004121!1.22e-12!102;UBERON:0000924!1.22e-12!102;UBERON:0006601!1.22e-12!102;UBERON:0003056!5.12e-11!49;UBERON:0000020!1.92e-10!12;UBERON:0001032!1.92e-10!12;UBERON:0004456!1.92e-10!12;UBERON:0001444!5.27e-10!11;UBERON:0005085!2.11e-09!13;UBERON:0000073!2.87e-09!75;UBERON:0001016!2.87e-09!75;UBERON:0001017!3.80e-09!73;UBERON:0005743!3.80e-09!73;UBERON:0001049!1.32e-08!52;UBERON:0005068!1.32e-08!52;UBERON:0006241!1.32e-08!52;UBERON:0007135!1.32e-08!52;UBERON:0007811!1.52e-07!86;UBERON:0002298!2.61e-07!6;UBERON:0000955!2.65e-07!50;UBERON:0006238!2.65e-07!50;UBERON:0002616!8.76e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.49e-20,9;UBERON:0000019,3.49e-20,9;UBERON:0000047,3.49e-20,9;UBERON:0010312,3.49e-20,9;UBERON:0004088,3.49e-20,9;UBERON:0002104,3.49e-20,9;UBERON:0001456,3.49e-20,9;UBERON:0003072,3.49e-20,9;UBERON:0004128,3.49e-20,9;UBERON:0003071,3.49e-20,9;UBERON:0001444,3.97e-16,11;UBERON:0000020,1.31e-14,12;UBERON:0001032,1.31e-14,12;UBERON:0004456,1.31e-14,12;UBERON:0002346,1.67e-13,64;UBERON:0003075,1.67e-13,64;UBERON:0007284,1.67e-13,64;UBERON:0000033,2.53e-13,13;UBERON:0005085,2.53e-13,13;UBERON:0010371,4.39e-11,73;UBERON:0003056,5.19e-10,49;UBERON:0004121,1.20e-09,95;UBERON:0000924,1.20e-09,95;UBERON:0006601,1.20e-09,95;UBERON:0010314,1.43e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,0.768436610643109,0,0,0,1.14260393761521,2.20868540951614,0,0,0,0,1.0214987046815,0.614426133024974,0.131886287730194,0,0,2.23346399201105,1.12552522006336,0.15279824777681,0.589257170947335,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,2.09706895166752,0.915001205637253,0.125654352112864,0.521472960576829,0,2.49345653471472,2.43361894601636,0,0,0,27.5678831211281,2.99277018814219,52.6475819152653,65.0024288597311,124.934293985808,184.038730204342,163.857448244323,196.211411228072,234.643957260287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.7507739709505,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0,6.48988557036784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.03111909406213,0,0,0,0.45032120322422,1.81256963593682,0,0,0,0,0.486213434136588,0.628839487883947,1.10306105070008,0.888986911206461,0.206035057238894,1.60459604795908,1.26348605881899,1.2673964994512,0.377252682772152,0.842773567228942,0.768301828858431,1.26358031702349,1.42888107384922,1.27472758539341,0.38581844092741,1.64834360321323,0.883193520806384,1.02860775715625,1.77475806159337,0.953744759789284,0.726732083161643,1.50575008664529,1.18460451048347,1.46342378298218,0.789209134313529,0.950628796921032,2.24456908663095,0.949080144993393,1.0835493061312,1.22769312950907,0.929621047115796,0.385813221962283,2.49810577937946,1.16965804222704,1.50409737833809,0,0.220591419119515,0.231867835620421|short_description=p1@Bfsp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107993 | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6NVD9 | |||
|association_with_transcript=64bp_to_ENSMUST00000124310,NM_001002896,uc009rgv.1_5end | |||
|cluster_id=chr9:103382554..103382593,- | |||
|description=CAGE_peak_1_at_Bfsp2_5end | |||
|id=chr9:103382554..103382593,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.74e-14!63;UBERON:0002346!2.31e-13!71;UBERON:0003075!2.31e-13!71;UBERON:0007284!2.31e-13!71;UBERON:0000970!7.22e-13!9;UBERON:0000019!7.22e-13!9;UBERON:0000047!7.22e-13!9;UBERON:0004088!7.22e-13!9;UBERON:0002104!7.22e-13!9;UBERON:0001456!7.22e-13!9;UBERON:0003072!7.22e-13!9;UBERON:0003071!7.22e-13!9;UBERON:0004128!7.22e-13!9;UBERON:0004121!1.22e-12!102;UBERON:0000924!1.22e-12!102;UBERON:0006601!1.22e-12!102;UBERON:0003056!5.12e-11!49;UBERON:0000020!1.92e-10!12;UBERON:0001032!1.92e-10!12;UBERON:0004456!1.92e-10!12;UBERON:0001444!5.27e-10!11;UBERON:0005085!2.11e-09!13;UBERON:0000073!2.87e-09!75;UBERON:0001016!2.87e-09!75;UBERON:0001017!3.80e-09!73;UBERON:0005743!3.80e-09!73;UBERON:0001049!1.32e-08!52;UBERON:0005068!1.32e-08!52;UBERON:0006241!1.32e-08!52;UBERON:0007135!1.32e-08!52;UBERON:0007811!1.52e-07!86;UBERON:0002298!2.61e-07!6;UBERON:0000955!2.65e-07!50;UBERON:0006238!2.65e-07!50;UBERON:0002616!8.76e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.49e-20,9;UBERON:0000019,3.49e-20,9;UBERON:0000047,3.49e-20,9;UBERON:0010312,3.49e-20,9;UBERON:0004088,3.49e-20,9;UBERON:0002104,3.49e-20,9;UBERON:0001456,3.49e-20,9;UBERON:0003072,3.49e-20,9;UBERON:0004128,3.49e-20,9;UBERON:0003071,3.49e-20,9;UBERON:0001444,3.97e-16,11;UBERON:0000020,1.31e-14,12;UBERON:0001032,1.31e-14,12;UBERON:0004456,1.31e-14,12;UBERON:0002346,1.67e-13,64;UBERON:0003075,1.67e-13,64;UBERON:0007284,1.67e-13,64;UBERON:0000033,2.53e-13,13;UBERON:0005085,2.53e-13,13;UBERON:0010371,4.39e-11,73;UBERON:0003056,5.19e-10,49;UBERON:0004121,1.20e-09,95;UBERON:0000924,1.20e-09,95;UBERON:0006601,1.20e-09,95;UBERON:0010314,1.43e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,0.768436610643109,0,0,0,1.14260393761521,2.20868540951614,0,0,0,0,1.0214987046815,0.614426133024974,0.131886287730194,0,0,2.23346399201105,1.12552522006336,0.15279824777681,0.589257170947335,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,2.09706895166752,0.915001205637253,0.125654352112864,0.521472960576829,0,2.49345653471472,2.43361894601636,0,0,0,27.5678831211281,2.99277018814219,52.6475819152653,65.0024288597311,124.934293985808,184.038730204342,163.857448244323,196.211411228072,234.643957260287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.7507739709505,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0,6.48988557036784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.03111909406213,0,0,0,0.45032120322422,1.81256963593682,0,0,0,0,0.486213434136588,0.628839487883947,1.10306105070008,0.888986911206461,0.206035057238894,1.60459604795908,1.26348605881899,1.2673964994512,0.377252682772152,0.842773567228942,0.768301828858431,1.26358031702349,1.42888107384922,1.27472758539341,0.38581844092741,1.64834360321323,0.883193520806384,1.02860775715625,1.77475806159337,0.953744759789284,0.726732083161643,1.50575008664529,1.18460451048347,1.46342378298218,0.789209134313529,0.950628796921032,2.24456908663095,0.949080144993393,1.0835493061312,1.22769312950907,0.929621047115796,0.385813221962283,2.49810577937946,1.16965804222704,1.50409737833809,0,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Bfsp2 | |||
}} |
Revision as of 11:14, 4 August 2015
Short description: | p1@Bfsp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bfsp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | 64bp_to_ENSMUST00000124310, NM_001002896, uc009rgv.1_5end |
EntrezGene: | 107993 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 3.49e-20 | 9 |
camera-type eye | 3.49e-20 | 9 |
simple eye | 3.49e-20 | 9 |
immature eye | 3.49e-20 | 9 |
ocular region | 3.49e-20 | 9 |
visual system | 3.49e-20 | 9 |
face | 3.49e-20 | 9 |
optic cup | 3.49e-20 | 9 |
optic vesicle | 3.49e-20 | 9 |
eye primordium | 3.49e-20 | 9 |
subdivision of head | 3.97e-16 | 11 |
sense organ | 1.31e-14 | 12 |
sensory system | 1.31e-14 | 12 |
entire sense organ system | 1.31e-14 | 12 |
neurectoderm | 1.67e-13 | 64 |
neural plate | 1.67e-13 | 64 |
presumptive neural plate | 1.67e-13 | 64 |
head | 2.53e-13 | 13 |
ectodermal placode | 2.53e-13 | 13 |
ecto-epithelium | 4.39e-11 | 73 |
pre-chordal neural plate | 5.19e-10 | 49 |
ectoderm-derived structure | 1.20e-09 | 95 |
ectoderm | 1.20e-09 | 95 |
presumptive ectoderm | 1.20e-09 | 95 |
structure with developmental contribution from neural crest | 1.43e-07 | 92 |