FFCP PHASE1:Mm9::chr19:7050964..7050987,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3214|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:7050964..7050987,+|id=chr19:7050964..7050987,+|ontology_enrichment_celltype=CL:0000107!1.19e-08!9;CL:0000540!2.03e-07!33;CL:0000047!2.03e-07!33;CL:0000031!2.03e-07!33;CL:0000404!2.03e-07!33;CL:0002319!3.12e-07!43;CL:0000221!7.64e-07!44;CL:0000133!7.64e-07!44|ontology_enrichment_celltype_v019_2=CL:0000107,1.44e-15,9;CL:0000540,4.17e-09,33;CL:0000047,4.17e-09,33;CL:0000031,4.17e-09,33;CL:0000404,4.17e-09,33;CL:0002319,3.15e-08,43;CL:0000221,6.18e-08,44;CL:0000133,6.18e-08,44;CL:0000393,4.44e-07,39;CL:0000211,4.44e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!1.19e-08!9;UBERON:0000010!5.87e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.44e-15,9;UBERON:0000010,2.58e-12,11;UBERON:0002370,4.74e-07,23;UBERON:0000974,4.74e-07,23;UBERON:0004807,4.74e-07,23;UBERON:0005058,4.74e-07,23;UBERON:0003351,4.74e-07,23;UBERON:0009113,4.74e-07,23;UBERON:0003295,4.74e-07,23;UBERON:0009722,4.74e-07,23;UBERON:0005562,4.74e-07,23;UBERON:0007690,4.74e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0.336093799142464,0.257259436035947,0,0,0.404632921719196,1.5869729378161,0,0.677689064138264,0,0,0,0,2.99600110518405,6.53171119046643,0.622137673850866,0,0,2.28520787523043,4.19650227808066,0.61245399607477,0.191690942036473,0,0,0.127687338085188,0,0.791317726381163,1.73826522844578,1.04182674111352,0,0,0.30559649555362,0.589257170947335,1.56608848879013,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.691846491768175,0,0.23517741427141,0,0,0,0,2.26473589926373,0.662524555381181,0,0,0,0.209446706813455,0,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0,1.94689515681309,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.90422890701429,0.408218994907967,0.640568601424249,0.281105173679186,0,0,0,0.175951124163949,0.43839146485515,0.834141747676794,2.43776516565517,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0,1.44066457330998,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0.472905432318573,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.468846746368813,0.163934945376675,2.27223834483936,4.10160685241134,3.12350995437311,3.01592756825919,3.82350076724083,3.34198011123591,3.39691836946599,5.26253912177363,3.21481443702443,6.32460444714438,0,0,0,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0,0.807322133479528,0.0603129249281559,0,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0,0.205421914329655,0.649604114888975,3.58053391334963,2.18549490259391,3.00488623799922,3.2491695978407,2.72609414859999,3.04827226619999,3.93222122033678,3.02119430293232,3.2712026157712,5.96072201126002,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0.512200817262403,0.486213434136588,1.25767897576789,0.919217542250071,1.11123363900808,1.64828045791115,1.60459604795908,1.01078884705519,1.2673964994512,2.07488975524684,1.21733959710847,1.53660365771686,1.20614484806788,0,1.85414921511769,0.964546102318525,2.06042950401653,1.32479028120958,1.71434626192708,1.06485483695602,0.715308569841963,2.76158191601424,2.07040636913727,1.94613598150856,0.914639864363863,2.36762740294059,0.950628796921032,1.68342681497322,1.30498519936592,0.886540341380071,1.63692417267876,0.929621047115796,1.15743966588685,0.999242311751784,1.16965804222704,0.859484216193193,5.16478496585877,0.441182838239031,1.39120701372253|short_description=p@chr19:7050964..7050987,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3214 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:7050964..7050987,+ | |||
|description=CAGE_peak_at_chr19:7050964..7050987,+ | |||
|id=chr19:7050964..7050987,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.19e-08!9;CL:0000540!2.03e-07!33;CL:0000047!2.03e-07!33;CL:0000031!2.03e-07!33;CL:0000404!2.03e-07!33;CL:0002319!3.12e-07!43;CL:0000221!7.64e-07!44;CL:0000133!7.64e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.44e-15,9;CL:0000540,4.17e-09,33;CL:0000047,4.17e-09,33;CL:0000031,4.17e-09,33;CL:0000404,4.17e-09,33;CL:0002319,3.15e-08,43;CL:0000221,6.18e-08,44;CL:0000133,6.18e-08,44;CL:0000393,4.44e-07,39;CL:0000211,4.44e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.19e-08!9;UBERON:0000010!5.87e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.44e-15,9;UBERON:0000010,2.58e-12,11;UBERON:0002370,4.74e-07,23;UBERON:0000974,4.74e-07,23;UBERON:0004807,4.74e-07,23;UBERON:0005058,4.74e-07,23;UBERON:0003351,4.74e-07,23;UBERON:0009113,4.74e-07,23;UBERON:0003295,4.74e-07,23;UBERON:0009722,4.74e-07,23;UBERON:0005562,4.74e-07,23;UBERON:0007690,4.74e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0.336093799142464,0.257259436035947,0,0,0.404632921719196,1.5869729378161,0,0.677689064138264,0,0,0,0,2.99600110518405,6.53171119046643,0.622137673850866,0,0,2.28520787523043,4.19650227808066,0.61245399607477,0.191690942036473,0,0,0.127687338085188,0,0.791317726381163,1.73826522844578,1.04182674111352,0,0,0.30559649555362,0.589257170947335,1.56608848879013,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.691846491768175,0,0.23517741427141,0,0,0,0,2.26473589926373,0.662524555381181,0,0,0,0.209446706813455,0,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0,1.94689515681309,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.90422890701429,0.408218994907967,0.640568601424249,0.281105173679186,0,0,0,0.175951124163949,0.43839146485515,0.834141747676794,2.43776516565517,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0,1.44066457330998,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0.472905432318573,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.468846746368813,0.163934945376675,2.27223834483936,4.10160685241134,3.12350995437311,3.01592756825919,3.82350076724083,3.34198011123591,3.39691836946599,5.26253912177363,3.21481443702443,6.32460444714438,0,0,0,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0,0.807322133479528,0.0603129249281559,0,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0,0.205421914329655,0.649604114888975,3.58053391334963,2.18549490259391,3.00488623799922,3.2491695978407,2.72609414859999,3.04827226619999,3.93222122033678,3.02119430293232,3.2712026157712,5.96072201126002,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0.512200817262403,0.486213434136588,1.25767897576789,0.919217542250071,1.11123363900808,1.64828045791115,1.60459604795908,1.01078884705519,1.2673964994512,2.07488975524684,1.21733959710847,1.53660365771686,1.20614484806788,0,1.85414921511769,0.964546102318525,2.06042950401653,1.32479028120958,1.71434626192708,1.06485483695602,0.715308569841963,2.76158191601424,2.07040636913727,1.94613598150856,0.914639864363863,2.36762740294059,0.950628796921032,1.68342681497322,1.30498519936592,0.886540341380071,1.63692417267876,0.929621047115796,1.15743966588685,0.999242311751784,1.16965804222704,0.859484216193193,5.16478496585877,0.441182838239031,1.39120701372253 | |||
|short_description=p@chr19:7050964..7050987,+ | |||
}} |
Latest revision as of 12:57, 4 August 2015
Short description: | p@chr19:7050964..7050987, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:7050964..7050987, + |
Coexpression cluster: | MCL_coexpression_mm9:3214 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.44e-15 | 9 |
neuron | 4.17e-09 | 33 |
neuronal stem cell | 4.17e-09 | 33 |
neuroblast | 4.17e-09 | 33 |
electrically signaling cell | 4.17e-09 | 33 |
neural cell | 3.15e-08 | 43 |
ectodermal cell | 6.18e-08 | 44 |
neurectodermal cell | 6.18e-08 | 44 |
electrically responsive cell | 4.44e-07 | 39 |
electrically active cell | 4.44e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.44e-15 | 9 |
peripheral nervous system | 2.58e-12 | 11 |
thymus | 4.74e-07 | 23 |
neck | 4.74e-07 | 23 |
respiratory system epithelium | 4.74e-07 | 23 |
hemolymphoid system gland | 4.74e-07 | 23 |
pharyngeal epithelium | 4.74e-07 | 23 |
thymic region | 4.74e-07 | 23 |
pharyngeal gland | 4.74e-07 | 23 |
entire pharyngeal arch endoderm | 4.74e-07 | 23 |
thymus primordium | 4.74e-07 | 23 |
early pharyngeal endoderm | 4.74e-07 | 23 |