FFCP PHASE1:Mm9::chr4:108952970..108953005,+: Difference between revisions
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{{FFCP|EntrezGene=13858|HGNC=|MCL_coexpression_id=2088|UniProt=P42567,Q80ZL3|association_with_transcript=90bp_to_NM_007943,uc008ucf.2,uc012dik.1_5end|description=CAGE_peak_1_at_Eps15_5end|id=chr4:108952970..108953005,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!3.43e-12!79;UBERON:0009569!7.05e-10!66;UBERON:0004119!5.89e-09!130;UBERON:0000925!5.89e-09!130;UBERON:0006595!5.89e-09!130;UBERON:0005172!6.58e-09!49;UBERON:0005173!6.58e-09!49;UBERON:0002417!6.58e-09!49;UBERON:0000916!6.58e-09!49;UBERON:0000926!9.15e-09!193;UBERON:0004120!9.15e-09!193;UBERON:0006603!9.15e-09!193;UBERON:0001007!1.36e-08!128;UBERON:0001555!1.36e-08!128;UBERON:0007026!1.36e-08!128;UBERON:0005256!2.17e-08!47;UBERON:0002365!2.69e-08!25;UBERON:0002330!2.69e-08!25;UBERON:0007023!2.88e-08!51;UBERON:0002100!3.08e-08!98;UBERON:0004921!5.04e-08!126;UBERON:0004185!5.04e-08!126;UBERON:0002107!5.94e-08!22;UBERON:0007499!5.94e-08!22;UBERON:0006925!5.94e-08!22;UBERON:0009497!5.94e-08!22;UBERON:0000015!5.94e-08!22;UBERON:0002423!5.94e-08!22;UBERON:0006235!5.94e-08!22;UBERON:0008835!5.94e-08!22;UBERON:0003894!5.94e-08!22;UBERON:0004161!5.94e-08!22;UBERON:0008836!5.94e-08!22;UBERON:0005177!7.68e-08!85;UBERON:0009854!2.21e-07!23;UBERON:0009856!2.21e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.24e-10,90;UBERON:0005177,7.04e-10,79;UBERON:0009569,7.05e-10,66;UBERON:0005256,4.69e-09,45;UBERON:0005172,6.58e-09,49;UBERON:0005173,6.58e-09,49;UBERON:0002417,6.58e-09,49;UBERON:0000916,6.58e-09,49;UBERON:0004119,1.05e-08,118;UBERON:0000925,1.05e-08,118;UBERON:0006595,1.05e-08,118;UBERON:0001007,2.39e-08,116;UBERON:0001555,2.39e-08,116;UBERON:0007026,2.39e-08,116;UBERON:0002365,2.69e-08,25;UBERON:0002330,2.69e-08,25;UBERON:0007023,2.88e-08,51;UBERON:0002107,5.94e-08,22;UBERON:0007499,5.94e-08,22;UBERON:0006925,5.94e-08,22;UBERON:0009497,5.94e-08,22;UBERON:0000015,5.94e-08,22;UBERON:0002423,5.94e-08,22;UBERON:0006235,5.94e-08,22;UBERON:0008835,5.94e-08,22;UBERON:0003894,5.94e-08,22;UBERON:0004161,5.94e-08,22;UBERON:0008836,5.94e-08,22;UBERON:0004921,8.73e-08,114;UBERON:0003104,1.21e-07,61;UBERON:0009142,1.21e-07,61;UBERON:0009854,2.21e-07,23;UBERON:0009856,2.21e-07,23|phase1_expression=17.135926640213,32.1057375028212,26.3899558845931,21.7774232140918,26.5474736871564,21.6564260766338,24.0621019813391,14.4618122254565,27.1722233752717,32.5349691587571,13.1837835533639,13.5612670292072,11.1280474455284,14.7740480088106,32.6447566579349,56.8955501365411,46.1710839564577,26.8142840554502,29.3424887916281,25.8877687596798,23.3018615013931,6.25532992565577,7.57479388502913,35.6783102829297,33.2643457547397,26.4146703492909,36.6147696735214,32.967098600941,45.4155972500734,47.6336945246269,40.3549529392655,9.52546010189447,17.8368788399525,15.8481681015439,16.1756907060714,14.1299448554718,17.150225926039,73.6615670096958,64.8508335954754,76.4344666201745,70.5877785637217,78.5502307702212,78.1671668380157,10.8271263458996,10.3404469843905,6.24058957349717,0.782391344348039,1.74420125104357,3.29529274101708,3.4997381833371,7.69925318939494,1.43752564364972,21.4761735753903,9.42970784614748,8.73843877770406,14.9210472900849,32.6648121530183,25.7836046138721,1.41621522601718,2.11596391708813,0.633831403506179,3.72728985276045,0.889294796111139,7.64914759689189,12.8552627133707,9.9467216092454,2.99600110518405,3.84218305321555,1.45165457231869,1.21505344498522,1.05162480675691,3.71346279724945,4.41737081903227,0.857435594504678,0.479227355091182,0,13.2139057199266,16.8547286272448,16.4358990584181,1.05509030184155,1.37231465403614,2.6045668527838,14.7966989470732,12.380777420697,15.1270265299042,7.66034322231536,11.10499110233,4.65998614563251,18.7043697532965,17.2303157043471,73.0458511528228,45.6024654800135,16.319312008986,11.3337670243942,23.3919510281161,27.7776670000348,24.2968846827931,22.4968025803036,16.3665182899807,6.36011234118612,10.2815696436977,16.6824420638613,2.54805239706646,14.2213340630666,7.79367747640371,8.10751569520315,9.60496445528088,21.009833868307,76.3866756759157,27.7586800051222,19.7773272513395,23.4438418300349,21.6778567420695,26.6779073778142,34.2183137764901,20.1066546127481,78.1136098040622,38.0296308699368,33.6152009740952,19.5737888436365,33.3470692875194,32.4866419600599,13.0474232852686,35.4264764383972,37.7004072264219,40.1067576677488,14.8570754387341,11.9980546198682,13.8506547509641,34.3020564237044,24.7050325522058,2.38743269014442,14.7750672163435,16.8772201838018,29.298114282898,22.064811777215,23.3212143217224,37.3220911830279,19.2069296409593,19.1502088856691,6.63614259109789,4.13823787980251,5.40186389416048,11.1521565198429,7.89223390155403,8.58361925908494,6.55912071918102,18.3679393224701,3.44908788692548,8.69887968771969,8.79755620819744,10.5213951565236,15.2925987074079,28.5566776548177,31.0731025975995,11.1459189418356,11.2354109970118,14.411482798424,13.924011470384,13.87742675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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13858 | |||
|HGNC= | |||
|MCL_coexpression_id=2088 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P42567,uniprot:Q80ZL3 | |||
|association_with_transcript=90bp_to_NM_007943,uc008ucf.2,uc012dik.1_5end | |||
|cluster_id=chr4:108952970..108953005,+ | |||
|description=CAGE_peak_1_at_Eps15_5end | |||
|id=chr4:108952970..108953005,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!3.43e-12!79;UBERON:0009569!7.05e-10!66;UBERON:0004119!5.89e-09!130;UBERON:0000925!5.89e-09!130;UBERON:0006595!5.89e-09!130;UBERON:0005172!6.58e-09!49;UBERON:0005173!6.58e-09!49;UBERON:0002417!6.58e-09!49;UBERON:0000916!6.58e-09!49;UBERON:0000926!9.15e-09!193;UBERON:0004120!9.15e-09!193;UBERON:0006603!9.15e-09!193;UBERON:0001007!1.36e-08!128;UBERON:0001555!1.36e-08!128;UBERON:0007026!1.36e-08!128;UBERON:0005256!2.17e-08!47;UBERON:0002365!2.69e-08!25;UBERON:0002330!2.69e-08!25;UBERON:0007023!2.88e-08!51;UBERON:0002100!3.08e-08!98;UBERON:0004921!5.04e-08!126;UBERON:0004185!5.04e-08!126;UBERON:0002107!5.94e-08!22;UBERON:0007499!5.94e-08!22;UBERON:0006925!5.94e-08!22;UBERON:0009497!5.94e-08!22;UBERON:0000015!5.94e-08!22;UBERON:0002423!5.94e-08!22;UBERON:0006235!5.94e-08!22;UBERON:0008835!5.94e-08!22;UBERON:0003894!5.94e-08!22;UBERON:0004161!5.94e-08!22;UBERON:0008836!5.94e-08!22;UBERON:0005177!7.68e-08!85;UBERON:0009854!2.21e-07!23;UBERON:0009856!2.21e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.24e-10,90;UBERON:0005177,7.04e-10,79;UBERON:0009569,7.05e-10,66;UBERON:0005256,4.69e-09,45;UBERON:0005172,6.58e-09,49;UBERON:0005173,6.58e-09,49;UBERON:0002417,6.58e-09,49;UBERON:0000916,6.58e-09,49;UBERON:0004119,1.05e-08,118;UBERON:0000925,1.05e-08,118;UBERON:0006595,1.05e-08,118;UBERON:0001007,2.39e-08,116;UBERON:0001555,2.39e-08,116;UBERON:0007026,2.39e-08,116;UBERON:0002365,2.69e-08,25;UBERON:0002330,2.69e-08,25;UBERON:0007023,2.88e-08,51;UBERON:0002107,5.94e-08,22;UBERON:0007499,5.94e-08,22;UBERON:0006925,5.94e-08,22;UBERON:0009497,5.94e-08,22;UBERON:0000015,5.94e-08,22;UBERON:0002423,5.94e-08,22;UBERON:0006235,5.94e-08,22;UBERON:0008835,5.94e-08,22;UBERON:0003894,5.94e-08,22;UBERON:0004161,5.94e-08,22;UBERON:0008836,5.94e-08,22;UBERON:0004921,8.73e-08,114;UBERON:0003104,1.21e-07,61;UBERON:0009142,1.21e-07,61;UBERON:0009854,2.21e-07,23;UBERON:0009856,2.21e-07,23 | |||
|phase1_expression=17.135926640213,32.1057375028212,26.3899558845931,21.7774232140918,26.5474736871564,21.6564260766338,24.0621019813391,14.4618122254565,27.1722233752717,32.5349691587571,13.1837835533639,13.5612670292072,11.1280474455284,14.7740480088106,32.6447566579349,56.8955501365411,46.1710839564577,26.8142840554502,29.3424887916281,25.8877687596798,23.3018615013931,6.25532992565577,7.57479388502913,35.6783102829297,33.2643457547397,26.4146703492909,36.6147696735214,32.967098600941,45.4155972500734,47.6336945246269,40.3549529392655,9.52546010189447,17.8368788399525,15.8481681015439,16.1756907060714,14.1299448554718,17.150225926039,73.6615670096958,64.8508335954754,76.4344666201745,70.5877785637217,78.5502307702212,78.1671668380157,10.8271263458996,10.3404469843905,6.24058957349717,0.782391344348039,1.74420125104357,3.29529274101708,3.4997381833371,7.69925318939494,1.43752564364972,21.4761735753903,9.42970784614748,8.73843877770406,14.9210472900849,32.6648121530183,25.7836046138721,1.41621522601718,2.11596391708813,0.633831403506179,3.72728985276045,0.889294796111139,7.64914759689189,12.8552627133707,9.9467216092454,2.99600110518405,3.84218305321555,1.45165457231869,1.21505344498522,1.05162480675691,3.71346279724945,4.41737081903227,0.857435594504678,0.479227355091182,0,13.2139057199266,16.8547286272448,16.4358990584181,1.05509030184155,1.37231465403614,2.6045668527838,14.7966989470732,12.380777420697,15.1270265299042,7.66034322231536,11.10499110233,4.65998614563251,18.7043697532965,17.2303157043471,73.0458511528228,45.6024654800135,16.319312008986,11.3337670243942,23.3919510281161,27.7776670000348,24.2968846827931,22.4968025803036,16.3665182899807,6.36011234118612,10.2815696436977,16.6824420638613,2.54805239706646,14.2213340630666,7.79367747640371,8.10751569520315,9.60496445528088,21.009833868307,76.3866756759157,27.7586800051222,19.7773272513395,23.4438418300349,21.6778567420695,26.6779073778142,34.2183137764901,20.1066546127481,78.1136098040622,38.0296308699368,33.6152009740952,19.5737888436365,33.3470692875194,32.4866419600599,13.0474232852686,35.4264764383972,37.7004072264219,40.1067576677488,14.8570754387341,11.9980546198682,13.8506547509641,34.3020564237044,24.7050325522058,2.38743269014442,14.7750672163435,16.8772201838018,29.298114282898,22.064811777215,23.3212143217224,37.3220911830279,19.2069296409593,19.1502088856691,6.63614259109789,4.13823787980251,5.40186389416048,11.1521565198429,7.89223390155403,8.58361925908494,6.55912071918102,18.3679393224701,3.44908788692548,8.69887968771969,8.79755620819744,10.5213951565236,15.2925987074079,28.5566776548177,31.0731025975995,11.1459189418356,11.2354109970118,14.411482798424,13.924011470384,13.8774267598786,14.3060896588469,14.5850269783422,15.3884078130387,12.5929108318338,13.5755059340893,13.4869687955237,10.7309360559848,17.1645053279739,14.3167069424728,24.9534545400225,28.5362209601412,29.9709974221931,39.5190207523891,43.4828796783605,23.5524742391823,7.30622747892919,32.711459515396,26.709507233018,9.59797127408553,13.9342003116263,16.1084326652617,19.3616183638409,16.0112191568307,16.9300807240178,26.5736274464927,29.810510805046,26.138861715228,28.0528625578023,27.4899362837959,33.2563181202062,36.0950543290739,32.2608862672075,5.69003702859245,11.6533482861923,14.6520056375005,12.8300336542548,13.9645790760691,13.6764848786121,18.2753592289104,22.5843526408791,29.3587621063371,38.1297236518364,41.799820419288,29.1978935003165,30.6632032376597,43.3983876902768,43.4120659771396,45.5824831932068,35.9022451011802,35.0989287689989,43.2901055489344,39.5368434990837,46.0058260887535,44.2847727725519,40.2528598317783,31.0672019874947,32.4709318474661,42.9374734013397,53.5784251483154,9.09558776498327,13.8520229975722,17.9929790921699,18.5405296147917,21.9433197248779,29.9934987516377,39.2218632194176,35.3102722797868,31.6694506197748,39.7042373957143,63.5789661097063,52.841604450964,55.4005894367189,27.142431109069,19.0366989336548,24.5882136509518,27.0418011378638,41.2615016268625,36.2184111569908,29.8361600585549,24.7421508660286,10.0962630213202,12.8844785617891,7.97066571611356,9.31978312014953,15.1503098376028,5.09537755419898,8.90583543684768,12.5670018901864,14.2303600060748,19.6006003017302,28.9557773824868,10.6839362200353,19.220661203722,27.8799507823585,23.8941249011933,14.5668381692989,12.3952658355548,17.1630622577867,12.4026795009925,24.9022469834581,25.3259727304857,25.0838273339479,24.5983191085458,21.4904995396355,26.3546521437497,24.7525303795648,10.8940673841212,8.64293251350289,3.75140182969988,9.85950361145325,11.8817956540323,11.7723419617367,10.86023535974,6.39376393140658,28.395276675709,27.9618333540243,20.5091410191115,36.7696344059501,37.621211420146,33.4133604101983,39.6316182090413,46.9442973270875,32.6458537025433,39.3101640262281,44.7681707690374,22.0833948720648,43.705908459252,71.956750575792,66.4333946724182,51.9326453178806,16.487907709404,14.4149995893368,15.2019971184866,24.821436068393,10.1227517945963,21.3485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| |||
|short_description=p1@Eps15 | |||
}} |
Revision as of 13:04, 4 August 2015
Short description: | p1@Eps15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Eps15_5end |
Coexpression cluster: | MCL_coexpression_mm9:2088 |
Association with transcript: | 90bp_to_NM_007943, uc008ucf.2, uc012dik.1_5end |
EntrezGene: | 13858 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 1.24e-10 | 90 |
trunk region element | 7.04e-10 | 79 |
subdivision of trunk | 7.05e-10 | 66 |
trunk mesenchyme | 4.69e-09 | 45 |
abdomen element | 6.58e-09 | 49 |
abdominal segment element | 6.58e-09 | 49 |
abdominal segment of trunk | 6.58e-09 | 49 |
abdomen | 6.58e-09 | 49 |
endoderm-derived structure | 1.05e-08 | 118 |
endoderm | 1.05e-08 | 118 |
presumptive endoderm | 1.05e-08 | 118 |
digestive system | 2.39e-08 | 116 |
digestive tract | 2.39e-08 | 116 |
primitive gut | 2.39e-08 | 116 |
exocrine gland | 2.69e-08 | 25 |
exocrine system | 2.69e-08 | 25 |
adult organism | 2.88e-08 | 51 |
liver | 5.94e-08 | 22 |
epithelial sac | 5.94e-08 | 22 |
digestive gland | 5.94e-08 | 22 |
epithelium of foregut-midgut junction | 5.94e-08 | 22 |
anatomical boundary | 5.94e-08 | 22 |
hepatobiliary system | 5.94e-08 | 22 |
foregut-midgut junction | 5.94e-08 | 22 |
hepatic diverticulum | 5.94e-08 | 22 |
liver primordium | 5.94e-08 | 22 |
septum transversum | 5.94e-08 | 22 |
liver bud | 5.94e-08 | 22 |
subdivision of digestive tract | 8.73e-08 | 114 |
mesenchyme | 1.21e-07 | 61 |
entire embryonic mesenchyme | 1.21e-07 | 61 |
digestive tract diverticulum | 2.21e-07 | 23 |
sac | 2.21e-07 | 23 |