FFCP PHASE1:Mm9::chr17:28954680..28954694,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=489|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:28954680..28954694,+|id=chr17:28954680..28954694,+|ontology_enrichment_celltype=CL:0002563!1.05e-10!9;CL:0002251!1.05e-10!9;CL:0000239!7.63e-08!6;CL:0000677!7.63e-08!6;CL:0000212!7.63e-08!6;CL:0000584!7.63e-08!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.88e-16,9;CL:0002251,1.88e-16,9;CL:0000239,1.35e-14,6;CL:0000677,1.35e-14,6;CL:0000584,1.35e-14,6;CL:0000075,2.01e-12,7;CL:0000066,1.08e-09,25;CL:0002076,2.25e-09,15;CL:0000682,1.41e-07,3;CL:0000223,1.00e-06,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.87e-23!43;UBERON:0005409!9.65e-20!59;UBERON:0000344!2.23e-17!15;UBERON:0001242!2.85e-15!13;UBERON:0000060!2.85e-15!13;UBERON:0001262!2.85e-15!13;UBERON:0004786!2.85e-15!13;UBERON:0004923!8.44e-13!24;UBERON:0003350!1.05e-10!9;UBERON:0004808!1.05e-10!9;UBERON:0001277!1.05e-10!9;UBERON:0000485!2.60e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.38e-58,31;UBERON:0005409,1.51e-39,47;UBERON:0000344,3.81e-30,15;UBERON:0001242,8.76e-26,13;UBERON:0001262,8.76e-26,13;UBERON:0004786,8.76e-26,13;UBERON:0004923,1.07e-17,24;UBERON:0003350,1.88e-16,9;UBERON:0004808,1.88e-16,9;UBERON:0001277,1.88e-16,9;UBERON:0001007,7.57e-15,116;UBERON:0001555,7.57e-15,116;UBERON:0007026,7.57e-15,116;UBERON:0004119,1.73e-14,118;UBERON:0000925,1.73e-14,118;UBERON:0006595,1.73e-14,118;UBERON:0000485,3.10e-13,11;UBERON:0004921,9.29e-13,114;UBERON:0002108,1.55e-11,4;UBERON:0000331,5.42e-09,3;UBERON:0002116,5.42e-09,3;UBERON:0001204,5.42e-09,3;UBERON:0001168,5.42e-09,3;UBERON:0001155,4.87e-07,2;UBERON:0000059,4.87e-07,2|phase1_expression=0,2.09385244583617,1.36499771816861,3.93203474698879,4.00716583957078,2.01455126294268,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,1.83527424853736,1.72269589234506,1.29228598847722,1.939241094173,11.2113817479261,5.29263272495855,3.32595765982957,0,0,0,2.02196133825892,0.997407872150954,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,16.775258509631,0,0,8.9409969323007,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,3.43785736662608,0,0,0.128867461322093,2.8235693447268,5.33707305227689,7.41879941838981,3.32170343081158,6.25856027951241,6.28338022000674,6.76452004939913,7.40863531052657,4.49409704327111,3.8904848977445,5.37681437786791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,6.70405924248657,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.655087691238533,0,0,0,6.73997861117323,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0.962757628775446,0.252697211763798,0,0.754505365544305,0.37456602987953,0.256100609619477,0.516919220600519,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.548783918618318,0,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,1.22769312950907,0.619747364743864,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr17:28954680..28954694,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=489 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:28954680..28954694,+ | |||
|description=CAGE_peak_at_chr17:28954680..28954694,+ | |||
|id=chr17:28954680..28954694,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.05e-10!9;CL:0002251!1.05e-10!9;CL:0000239!7.63e-08!6;CL:0000677!7.63e-08!6;CL:0000212!7.63e-08!6;CL:0000584!7.63e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.88e-16,9;CL:0002251,1.88e-16,9;CL:0000239,1.35e-14,6;CL:0000677,1.35e-14,6;CL:0000584,1.35e-14,6;CL:0000075,2.01e-12,7;CL:0000066,1.08e-09,25;CL:0002076,2.25e-09,15;CL:0000682,1.41e-07,3;CL:0000223,1.00e-06,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.87e-23!43;UBERON:0005409!9.65e-20!59;UBERON:0000344!2.23e-17!15;UBERON:0001242!2.85e-15!13;UBERON:0000060!2.85e-15!13;UBERON:0001262!2.85e-15!13;UBERON:0004786!2.85e-15!13;UBERON:0004923!8.44e-13!24;UBERON:0003350!1.05e-10!9;UBERON:0004808!1.05e-10!9;UBERON:0001277!1.05e-10!9;UBERON:0000485!2.60e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.38e-58,31;UBERON:0005409,1.51e-39,47;UBERON:0000344,3.81e-30,15;UBERON:0001242,8.76e-26,13;UBERON:0001262,8.76e-26,13;UBERON:0004786,8.76e-26,13;UBERON:0004923,1.07e-17,24;UBERON:0003350,1.88e-16,9;UBERON:0004808,1.88e-16,9;UBERON:0001277,1.88e-16,9;UBERON:0001007,7.57e-15,116;UBERON:0001555,7.57e-15,116;UBERON:0007026,7.57e-15,116;UBERON:0004119,1.73e-14,118;UBERON:0000925,1.73e-14,118;UBERON:0006595,1.73e-14,118;UBERON:0000485,3.10e-13,11;UBERON:0004921,9.29e-13,114;UBERON:0002108,1.55e-11,4;UBERON:0000331,5.42e-09,3;UBERON:0002116,5.42e-09,3;UBERON:0001204,5.42e-09,3;UBERON:0001168,5.42e-09,3;UBERON:0001155,4.87e-07,2;UBERON:0000059,4.87e-07,2 | |||
|phase1_expression=0,2.09385244583617,1.36499771816861,3.93203474698879,4.00716583957078,2.01455126294268,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,1.83527424853736,1.72269589234506,1.29228598847722,1.939241094173,11.2113817479261,5.29263272495855,3.32595765982957,0,0,0,2.02196133825892,0.997407872150954,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,16.775258509631,0,0,8.9409969323007,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,3.43785736662608,0,0,0.128867461322093,2.8235693447268,5.33707305227689,7.41879941838981,3.32170343081158,6.25856027951241,6.28338022000674,6.76452004939913,7.40863531052657,4.49409704327111,3.8904848977445,5.37681437786791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,6.70405924248657,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.655087691238533,0,0,0,6.73997861117323,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0.962757628775446,0.252697211763798,0,0.754505365544305,0.37456602987953,0.256100609619477,0.516919220600519,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.548783918618318,0,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,1.22769312950907,0.619747364743864,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:28954680..28954694,+ | |||
}} |
Latest revision as of 13:26, 4 August 2015
Short description: | p@chr17:28954680..28954694, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:28954680..28954694, + |
Coexpression cluster: | MCL_coexpression_mm9:489 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.88e-16 | 9 |
epithelial cell of alimentary canal | 1.88e-16 | 9 |
brush border epithelial cell | 1.35e-14 | 6 |
gut absorptive cell | 1.35e-14 | 6 |
enterocyte | 1.35e-14 | 6 |
columnar/cuboidal epithelial cell | 2.01e-12 | 7 |
epithelial cell | 1.08e-09 | 25 |
endo-epithelial cell | 2.25e-09 | 15 |
M cell of gut | 1.41e-07 | 3 |
endodermal cell | 1.00e-06 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.38e-58 | 31 |
gastrointestinal system | 1.51e-39 | 47 |
mucosa | 3.81e-30 | 15 |
intestinal mucosa | 8.76e-26 | 13 |
wall of intestine | 8.76e-26 | 13 |
gastrointestinal system mucosa | 8.76e-26 | 13 |
organ component layer | 1.07e-17 | 24 |
epithelium of mucosa | 1.88e-16 | 9 |
gastrointestinal system epithelium | 1.88e-16 | 9 |
intestinal epithelium | 1.88e-16 | 9 |
digestive system | 7.57e-15 | 116 |
digestive tract | 7.57e-15 | 116 |
primitive gut | 7.57e-15 | 116 |
endoderm-derived structure | 1.73e-14 | 118 |
endoderm | 1.73e-14 | 118 |
presumptive endoderm | 1.73e-14 | 118 |
simple columnar epithelium | 3.10e-13 | 11 |
subdivision of digestive tract | 9.29e-13 | 114 |
small intestine | 1.55e-11 | 4 |
ileal mucosa | 5.42e-09 | 3 |
ileum | 5.42e-09 | 3 |
mucosa of small intestine | 5.42e-09 | 3 |
wall of small intestine | 5.42e-09 | 3 |
colon | 4.87e-07 | 2 |
large intestine | 4.87e-07 | 2 |