FFCP PHASE1:Mm9::chr12:100139474..100139485,-: Difference between revisions
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{{FFCP|EntrezGene=319670|HGNC=|MCL_coexpression_id=927|UniProt=F8WI15|association_with_transcript=-167bp_to_ENSMUST00000029746_5end|description=CAGE_peak_3_at_Eml5_5end|id=chr12:100139474..100139485,-|ontology_enrichment_celltype=CL:0000107!8.01e-12!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.35e-50,9;CL:0000540,5.84e-16,33;CL:0000047,5.84e-16,33;CL:0000031,5.84e-16,33;CL:0000404,5.84e-16,33;CL:0000393,2.61e-13,39;CL:0000211,2.61e-13,39;CL:0002319,5.95e-12,43;CL:0000221,1.19e-11,44;CL:0000133,1.19e-11,44;CL:0002321,8.00e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!8.80e-21!102;UBERON:0000924!8.80e-21!102;UBERON:0006601!8.80e-21!102;UBERON:0002346!3.64e-17!71;UBERON:0003075!3.64e-17!71;UBERON:0007284!3.64e-17!71;UBERON:0000033!4.98e-15!63;UBERON:0000073!1.19e-12!75;UBERON:0001016!1.19e-12!75;UBERON:0001017!1.22e-12!73;UBERON:0005743!1.22e-12!73;UBERON:0002410!8.01e-12!9;UBERON:0002342!5.60e-11!10;UBERON:0005062!5.60e-11!10;UBERON:0000010!1.57e-10!11;UBERON:0003056!4.06e-10!49;UBERON:0007811!7.63e-10!86;UBERON:0000955!4.39e-09!50;UBERON:0006238!4.39e-09!50;UBERON:0000020!1.69e-08!12;UBERON:0001032!1.69e-08!12;UBERON:0004456!1.69e-08!12;UBERON:0002616!2.23e-08!49;UBERON:0000153!5.23e-08!94;UBERON:0002369!1.24e-07!7;UBERON:0006858!1.24e-07!7;UBERON:0000970!4.24e-07!9;UBERON:0000019!4.24e-07!9;UBERON:0000047!4.24e-07!9;UBERON:0004088!4.24e-07!9;UBERON:0002104!4.24e-07!9;UBERON:0001456!4.24e-07!9;UBERON:0003072!4.24e-07!9;UBERON:0003071!4.24e-07!9;UBERON:0004128!4.24e-07!9;UBERON:0001444!8.97e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.35e-50,9;UBERON:0000010,4.83e-41,11;UBERON:0000011,5.55e-18,3;UBERON:0000013,6.33e-18,3;UBERON:0010313,1.56e-17,3;UBERON:0002342,1.56e-17,3;UBERON:0002005,1.56e-17,3;UBERON:0005428,1.56e-17,3;UBERON:0005062,1.56e-17,3;UBERON:0001017,1.98e-15,73;UBERON:0001016,5.72e-15,75;UBERON:0004121,2.02e-11,95;UBERON:0000924,2.02e-11,95;UBERON:0006601,2.02e-11,95|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0.342401459862411,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.46081959976873,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.890652834388949,1.04091196059682,0.304465478312141,0.230615497256059,0.753613202763113,0.705532242814229,0.753999547978053,0,0,0,0,0,0,0,1.75668478206928,2.93225389538837,0,0,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.767146371990992,0.20778804455956,0.162241263067758,0,0,0,0.420883711772948,0,0.459804208866946,0.540186389416048,0.60281927134286,0.680364991513279,0.512454881139399,0.937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.411618449517138,0,0,0.213288250535234,0,0.128867461322093,0,0,0.570676878337677,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586058432961016,0,0,3.15508219416257,2.73307121007647,5.81643173878557,3.34556317133573,7.12955757063661,7.64306633129848,2.42886421004937,8.47541987942804,12.6492088942888,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.886701168211368,0.356737635204141,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,1.37016503954128,0,0.675022500231806,0,1.35942722695261,0,0.207574695168353,0,0,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.17230640686684,0,0,0,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p3@Eml5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319670 | |||
|HGNC= | |||
|MCL_coexpression_id=927 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WI15 | |||
|association_with_transcript=-167bp_to_ENSMUST00000029746_5end | |||
|cluster_id=chr12:100139474..100139485,- | |||
|description=CAGE_peak_3_at_Eml5_5end | |||
|id=chr12:100139474..100139485,- | |||
|ontology_enrichment_celltype=CL:0000107!8.01e-12!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.35e-50,9;CL:0000540,5.84e-16,33;CL:0000047,5.84e-16,33;CL:0000031,5.84e-16,33;CL:0000404,5.84e-16,33;CL:0000393,2.61e-13,39;CL:0000211,2.61e-13,39;CL:0002319,5.95e-12,43;CL:0000221,1.19e-11,44;CL:0000133,1.19e-11,44;CL:0002321,8.00e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.80e-21!102;UBERON:0000924!8.80e-21!102;UBERON:0006601!8.80e-21!102;UBERON:0002346!3.64e-17!71;UBERON:0003075!3.64e-17!71;UBERON:0007284!3.64e-17!71;UBERON:0000033!4.98e-15!63;UBERON:0000073!1.19e-12!75;UBERON:0001016!1.19e-12!75;UBERON:0001017!1.22e-12!73;UBERON:0005743!1.22e-12!73;UBERON:0002410!8.01e-12!9;UBERON:0002342!5.60e-11!10;UBERON:0005062!5.60e-11!10;UBERON:0000010!1.57e-10!11;UBERON:0003056!4.06e-10!49;UBERON:0007811!7.63e-10!86;UBERON:0000955!4.39e-09!50;UBERON:0006238!4.39e-09!50;UBERON:0000020!1.69e-08!12;UBERON:0001032!1.69e-08!12;UBERON:0004456!1.69e-08!12;UBERON:0002616!2.23e-08!49;UBERON:0000153!5.23e-08!94;UBERON:0002369!1.24e-07!7;UBERON:0006858!1.24e-07!7;UBERON:0000970!4.24e-07!9;UBERON:0000019!4.24e-07!9;UBERON:0000047!4.24e-07!9;UBERON:0004088!4.24e-07!9;UBERON:0002104!4.24e-07!9;UBERON:0001456!4.24e-07!9;UBERON:0003072!4.24e-07!9;UBERON:0003071!4.24e-07!9;UBERON:0004128!4.24e-07!9;UBERON:0001444!8.97e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.35e-50,9;UBERON:0000010,4.83e-41,11;UBERON:0000011,5.55e-18,3;UBERON:0000013,6.33e-18,3;UBERON:0010313,1.56e-17,3;UBERON:0002342,1.56e-17,3;UBERON:0002005,1.56e-17,3;UBERON:0005428,1.56e-17,3;UBERON:0005062,1.56e-17,3;UBERON:0001017,1.98e-15,73;UBERON:0001016,5.72e-15,75;UBERON:0004121,2.02e-11,95;UBERON:0000924,2.02e-11,95;UBERON:0006601,2.02e-11,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0.342401459862411,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.46081959976873,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.890652834388949,1.04091196059682,0.304465478312141,0.230615497256059,0.753613202763113,0.705532242814229,0.753999547978053,0,0,0,0,0,0,0,1.75668478206928,2.93225389538837,0,0,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.767146371990992,0.20778804455956,0.162241263067758,0,0,0,0.420883711772948,0,0.459804208866946,0.540186389416048,0.60281927134286,0.680364991513279,0.512454881139399,0.937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.411618449517138,0,0,0.213288250535234,0,0.128867461322093,0,0,0.570676878337677,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586058432961016,0,0,3.15508219416257,2.73307121007647,5.81643173878557,3.34556317133573,7.12955757063661,7.64306633129848,2.42886421004937,8.47541987942804,12.6492088942888,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.886701168211368,0.356737635204141,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,1.37016503954128,0,0.675022500231806,0,1.35942722695261,0,0.207574695168353,0,0,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.17230640686684,0,0,0,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p3@Eml5 | |||
}} |
Revision as of 13:46, 4 August 2015
Short description: | p3@Eml5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Eml5_5end |
Coexpression cluster: | MCL_coexpression_mm9:927 |
Association with transcript: | -167bp_to_ENSMUST00000029746_5end |
EntrezGene: | 319670 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.35e-50 | 9 |
neuron | 5.84e-16 | 33 |
neuronal stem cell | 5.84e-16 | 33 |
neuroblast | 5.84e-16 | 33 |
electrically signaling cell | 5.84e-16 | 33 |
electrically responsive cell | 2.61e-13 | 39 |
electrically active cell | 2.61e-13 | 39 |
neural cell | 5.95e-12 | 43 |
ectodermal cell | 1.19e-11 | 44 |
neurectodermal cell | 1.19e-11 | 44 |
embryonic cell | 8.00e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.35e-50 | 9 |
peripheral nervous system | 4.83e-41 | 11 |
parasympathetic nervous system | 5.55e-18 | 3 |
sympathetic nervous system | 6.33e-18 | 3 |
neural crest-derived structure | 1.56e-17 | 3 |
neural crest | 1.56e-17 | 3 |
enteric nervous system | 1.56e-17 | 3 |
vagal neural crest | 1.56e-17 | 3 |
neural fold | 1.56e-17 | 3 |
central nervous system | 1.98e-15 | 73 |
nervous system | 5.72e-15 | 75 |
ectoderm-derived structure | 2.02e-11 | 95 |
ectoderm | 2.02e-11 | 95 |
presumptive ectoderm | 2.02e-11 | 95 |