FFCP PHASE1:Mm9::chr5:87765701..87765711,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:87765701..87765711,-|id=chr5:87765701..87765711,-|ontology_enrichment_celltype=CL:0000066!9.36e-13!25;CL:0000223!1.75e-09!20;CL:0000181!2.00e-08!5;CL:0000417!2.00e-08!5;CL:0000668!2.00e-08!5;CL:0000412!2.00e-08!5;CL:0000182!2.00e-08!5;CL:0002563!7.57e-08!9;CL:0002251!7.57e-08!9;CL:0002250!9.52e-07!3|ontology_enrichment_celltype_v019_2=CL:0000182,2.28e-17,5;CL:0000066,2.73e-07,25;CL:0000710,9.48e-07,1;CL:0002077,9.48e-07,1;CL:0005014,9.48e-07,1;CL:0002315,9.48e-07,1;CL:0002490,9.48e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.45e-16!22;UBERON:0007499!7.45e-16!22;UBERON:0006925!7.45e-16!22;UBERON:0009497!7.45e-16!22;UBERON:0000015!7.45e-16!22;UBERON:0002423!7.45e-16!22;UBERON:0006235!7.45e-16!22;UBERON:0008835!7.45e-16!22;UBERON:0003894!7.45e-16!22;UBERON:0004161!7.45e-16!22;UBERON:0008836!7.45e-16!22;UBERON:0009854!4.99e-15!23;UBERON:0009856!4.99e-15!23;UBERON:0002365!1.41e-13!25;UBERON:0002330!1.41e-13!25;UBERON:0000160!2.24e-12!43;UBERON:0001007!3.14e-12!128;UBERON:0001555!3.14e-12!128;UBERON:0007026!3.14e-12!128;UBERON:0004119!6.31e-12!130;UBERON:0000925!6.31e-12!130;UBERON:0006595!6.31e-12!130;UBERON:0004921!1.65e-11!126;UBERON:0004185!1.65e-11!126;UBERON:0003929!1.00e-10!55;UBERON:0000344!3.99e-10!15;UBERON:0001242!2.00e-09!13;UBERON:0000060!2.00e-09!13;UBERON:0001262!2.00e-09!13;UBERON:0004786!2.00e-09!13;UBERON:0000490!2.16e-09!66;UBERON:0005409!6.33e-09!59;UBERON:0000485!9.15e-09!11;UBERON:0005256!4.61e-08!47;UBERON:0003350!7.57e-08!9;UBERON:0004808!7.57e-08!9;UBERON:0001277!7.57e-08!9;UBERON:0005911!1.19e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.39e-18,22;UBERON:0007499,2.39e-18,22;UBERON:0006925,2.39e-18,22;UBERON:0009497,2.39e-18,22;UBERON:0000015,2.39e-18,22;UBERON:0002423,2.39e-18,22;UBERON:0006235,2.39e-18,22;UBERON:0008835,2.39e-18,22;UBERON:0003894,2.39e-18,22;UBERON:0004161,2.39e-18,22;UBERON:0008836,2.39e-18,22;UBERON:0009854,1.67e-17,23;UBERON:0009856,1.67e-17,23;UBERON:0002365,5.15e-16,25;UBERON:0002330,5.15e-16,25;UBERON:0005256,2.19e-08,45;UBERON:0003914,5.59e-08,47;UBERON:0005172,1.32e-07,49;UBERON:0005173,1.32e-07,49;UBERON:0002417,1.32e-07,49;UBERON:0000916,1.32e-07,49;UBERON:0003104,2.39e-07,61;UBERON:0009142,2.39e-07,61;UBERON:0004921,4.68e-07,114;UBERON:0001007,6.74e-07,116;UBERON:0001555,6.74e-07,116;UBERON:0007026,6.74e-07,116;UBERON:0004119,9.59e-07,118;UBERON:0000925,9.59e-07,118;UBERON:0006595,9.59e-07,118|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,0,1.7230479846363,0.430942465371778,0,0.504060259519861,0,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,1.3599426674155,3.2382191498269,3.89865850468601,2.68816132258401,0.702222100658759,0,0,0,2.81686839553361,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.264450566663544,0,0,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0.38992817423824,3.59527763461689,1.08069024937347,1.99141273254367,0,0,0,0,0,0,0,0,0,0,4.74324203339438,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.624075346229121,0.757736633841335,2.69096120282868,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:87765701..87765711,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:87765701..87765711,- | |||
|description=CAGE_peak_at_chr5:87765701..87765711,- | |||
|id=chr5:87765701..87765711,- | |||
|ontology_enrichment_celltype=CL:0000066!9.36e-13!25;CL:0000223!1.75e-09!20;CL:0000181!2.00e-08!5;CL:0000417!2.00e-08!5;CL:0000668!2.00e-08!5;CL:0000412!2.00e-08!5;CL:0000182!2.00e-08!5;CL:0002563!7.57e-08!9;CL:0002251!7.57e-08!9;CL:0002250!9.52e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.28e-17,5;CL:0000066,2.73e-07,25;CL:0000710,9.48e-07,1;CL:0002077,9.48e-07,1;CL:0005014,9.48e-07,1;CL:0002315,9.48e-07,1;CL:0002490,9.48e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.45e-16!22;UBERON:0007499!7.45e-16!22;UBERON:0006925!7.45e-16!22;UBERON:0009497!7.45e-16!22;UBERON:0000015!7.45e-16!22;UBERON:0002423!7.45e-16!22;UBERON:0006235!7.45e-16!22;UBERON:0008835!7.45e-16!22;UBERON:0003894!7.45e-16!22;UBERON:0004161!7.45e-16!22;UBERON:0008836!7.45e-16!22;UBERON:0009854!4.99e-15!23;UBERON:0009856!4.99e-15!23;UBERON:0002365!1.41e-13!25;UBERON:0002330!1.41e-13!25;UBERON:0000160!2.24e-12!43;UBERON:0001007!3.14e-12!128;UBERON:0001555!3.14e-12!128;UBERON:0007026!3.14e-12!128;UBERON:0004119!6.31e-12!130;UBERON:0000925!6.31e-12!130;UBERON:0006595!6.31e-12!130;UBERON:0004921!1.65e-11!126;UBERON:0004185!1.65e-11!126;UBERON:0003929!1.00e-10!55;UBERON:0000344!3.99e-10!15;UBERON:0001242!2.00e-09!13;UBERON:0000060!2.00e-09!13;UBERON:0001262!2.00e-09!13;UBERON:0004786!2.00e-09!13;UBERON:0000490!2.16e-09!66;UBERON:0005409!6.33e-09!59;UBERON:0000485!9.15e-09!11;UBERON:0005256!4.61e-08!47;UBERON:0003350!7.57e-08!9;UBERON:0004808!7.57e-08!9;UBERON:0001277!7.57e-08!9;UBERON:0005911!1.19e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.39e-18,22;UBERON:0007499,2.39e-18,22;UBERON:0006925,2.39e-18,22;UBERON:0009497,2.39e-18,22;UBERON:0000015,2.39e-18,22;UBERON:0002423,2.39e-18,22;UBERON:0006235,2.39e-18,22;UBERON:0008835,2.39e-18,22;UBERON:0003894,2.39e-18,22;UBERON:0004161,2.39e-18,22;UBERON:0008836,2.39e-18,22;UBERON:0009854,1.67e-17,23;UBERON:0009856,1.67e-17,23;UBERON:0002365,5.15e-16,25;UBERON:0002330,5.15e-16,25;UBERON:0005256,2.19e-08,45;UBERON:0003914,5.59e-08,47;UBERON:0005172,1.32e-07,49;UBERON:0005173,1.32e-07,49;UBERON:0002417,1.32e-07,49;UBERON:0000916,1.32e-07,49;UBERON:0003104,2.39e-07,61;UBERON:0009142,2.39e-07,61;UBERON:0004921,4.68e-07,114;UBERON:0001007,6.74e-07,116;UBERON:0001555,6.74e-07,116;UBERON:0007026,6.74e-07,116;UBERON:0004119,9.59e-07,118;UBERON:0000925,9.59e-07,118;UBERON:0006595,9.59e-07,118 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,0,1.7230479846363,0.430942465371778,0,0.504060259519861,0,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,1.3599426674155,3.2382191498269,3.89865850468601,2.68816132258401,0.702222100658759,0,0,0,2.81686839553361,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.264450566663544,0,0,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0.38992817423824,3.59527763461689,1.08069024937347,1.99141273254367,0,0,0,0,0,0,0,0,0,0,4.74324203339438,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.624075346229121,0.757736633841335,2.69096120282868,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:87765701..87765711,- | |||
}} |
Latest revision as of 16:12, 4 August 2015
Short description: | p@chr5:87765701..87765711, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:87765701..87765711, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.28e-17 | 5 |
epithelial cell | 2.73e-07 | 25 |
neurecto-epithelial cell | 9.48e-07 | 1 |
ecto-epithelial cell | 9.48e-07 | 1 |
auditory epithelial support cell | 9.48e-07 | 1 |
supporting cell of cochlea | 9.48e-07 | 1 |
organ of Corti supporting cell | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 2.39e-18 | 22 |
epithelial sac | 2.39e-18 | 22 |
digestive gland | 2.39e-18 | 22 |
epithelium of foregut-midgut junction | 2.39e-18 | 22 |
anatomical boundary | 2.39e-18 | 22 |
hepatobiliary system | 2.39e-18 | 22 |
foregut-midgut junction | 2.39e-18 | 22 |
hepatic diverticulum | 2.39e-18 | 22 |
liver primordium | 2.39e-18 | 22 |
septum transversum | 2.39e-18 | 22 |
liver bud | 2.39e-18 | 22 |
digestive tract diverticulum | 1.67e-17 | 23 |
sac | 1.67e-17 | 23 |
exocrine gland | 5.15e-16 | 25 |
exocrine system | 5.15e-16 | 25 |
trunk mesenchyme | 2.19e-08 | 45 |
epithelial tube | 5.59e-08 | 47 |
abdomen element | 1.32e-07 | 49 |
abdominal segment element | 1.32e-07 | 49 |
abdominal segment of trunk | 1.32e-07 | 49 |
abdomen | 1.32e-07 | 49 |
mesenchyme | 2.39e-07 | 61 |
entire embryonic mesenchyme | 2.39e-07 | 61 |
subdivision of digestive tract | 4.68e-07 | 114 |
digestive system | 6.74e-07 | 116 |
digestive tract | 6.74e-07 | 116 |
primitive gut | 6.74e-07 | 116 |
endoderm-derived structure | 9.59e-07 | 118 |
endoderm | 9.59e-07 | 118 |
presumptive endoderm | 9.59e-07 | 118 |