FFCP PHASE1:Mm9::chr7:26237108..26237137,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:26237108..26237137,+|id=chr7:26237108..26237137,+|ontology_enrichment_celltype=CL:0000239!6.37e-21!6;CL:0000677!6.37e-21!6;CL:0000212!6.37e-21!6;CL:0000584!6.37e-21!6;CL:0002563!2.41e-18!9;CL:0002251!2.41e-18!9;CL:0000075!7.37e-18!7;CL:0000066!9.59e-13!25;CL:0000473!3.34e-12!3;CL:0000627!3.34e-12!3;CL:0000682!3.34e-12!3;CL:0002076!1.17e-10!15;CL:0000223!9.00e-08!20|ontology_enrichment_celltype_v019_2=CL:0000682,6.85e-22,3;CL:0000239,5.52e-11,6;CL:0000677,5.52e-11,6;CL:0000584,5.52e-11,6;CL:0000066,7.91e-10,25;CL:0000473,1.00e-09,7;CL:0000075,1.71e-09,7;CL:0002563,1.69e-07,9;CL:0002251,1.69e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.71e-32!15;UBERON:0001242!1.68e-25!13;UBERON:0000060!1.68e-25!13;UBERON:0001262!1.68e-25!13;UBERON:0004786!1.68e-25!13;UBERON:0000160!1.14e-22!43;UBERON:0004923!1.95e-22!24;UBERON:0003350!2.41e-18!9;UBERON:0004808!2.41e-18!9;UBERON:0001277!2.41e-18!9;UBERON:0005409!1.67e-17!59;UBERON:0000485!7.46e-15!11;UBERON:0000331!2.37e-11!3;UBERON:0002116!2.37e-11!3;UBERON:0001204!2.37e-11!3;UBERON:0001168!2.37e-11!3;UBERON:0001962!1.92e-08!2;UBERON:0001961!1.92e-08!2;UBERON:0001744!1.92e-08!2;UBERON:0001007!4.50e-08!128;UBERON:0001555!4.50e-08!128;UBERON:0007026!4.50e-08!128;UBERON:0004119!6.91e-08!130;UBERON:0000925!6.91e-08!130;UBERON:0006595!6.91e-08!130|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.85e-28,15;UBERON:0000331,2.93e-20,3;UBERON:0002116,2.93e-20,3;UBERON:0001204,2.93e-20,3;UBERON:0001168,2.93e-20,3;UBERON:0001242,2.15e-18,13;UBERON:0001262,2.15e-18,13;UBERON:0004786,2.15e-18,13;UBERON:0004923,2.23e-17,24;UBERON:0002108,2.28e-15,4;UBERON:0001962,1.05e-14,2;UBERON:0001961,1.05e-14,2;UBERON:0001744,1.05e-14,2;UBERON:0000160,4.01e-13,31;UBERON:0002465,4.07e-10,3;UBERON:0005409,2.03e-08,47;UBERON:0003199,2.98e-08,1;UBERON:0003350,1.69e-07,9;UBERON:0004808,1.69e-07,9;UBERON:0001277,1.69e-07,9|phase1_expression=0,4.18770489167233,7.27998783023258,3.0246421130683,0.500895729946347,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.35877634027623,4.59385571292016,6.03066794622705,7.54149314400612,1.33016393619462,2.01624103807945,2.66076612786366,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:26237108..26237137,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:26237108..26237137,+ | |||
|description=CAGE_peak_at_chr7:26237108..26237137,+ | |||
|id=chr7:26237108..26237137,+ | |||
|ontology_enrichment_celltype=CL:0000239!6.37e-21!6;CL:0000677!6.37e-21!6;CL:0000212!6.37e-21!6;CL:0000584!6.37e-21!6;CL:0002563!2.41e-18!9;CL:0002251!2.41e-18!9;CL:0000075!7.37e-18!7;CL:0000066!9.59e-13!25;CL:0000473!3.34e-12!3;CL:0000627!3.34e-12!3;CL:0000682!3.34e-12!3;CL:0002076!1.17e-10!15;CL:0000223!9.00e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.85e-22,3;CL:0000239,5.52e-11,6;CL:0000677,5.52e-11,6;CL:0000584,5.52e-11,6;CL:0000066,7.91e-10,25;CL:0000473,1.00e-09,7;CL:0000075,1.71e-09,7;CL:0002563,1.69e-07,9;CL:0002251,1.69e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.71e-32!15;UBERON:0001242!1.68e-25!13;UBERON:0000060!1.68e-25!13;UBERON:0001262!1.68e-25!13;UBERON:0004786!1.68e-25!13;UBERON:0000160!1.14e-22!43;UBERON:0004923!1.95e-22!24;UBERON:0003350!2.41e-18!9;UBERON:0004808!2.41e-18!9;UBERON:0001277!2.41e-18!9;UBERON:0005409!1.67e-17!59;UBERON:0000485!7.46e-15!11;UBERON:0000331!2.37e-11!3;UBERON:0002116!2.37e-11!3;UBERON:0001204!2.37e-11!3;UBERON:0001168!2.37e-11!3;UBERON:0001962!1.92e-08!2;UBERON:0001961!1.92e-08!2;UBERON:0001744!1.92e-08!2;UBERON:0001007!4.50e-08!128;UBERON:0001555!4.50e-08!128;UBERON:0007026!4.50e-08!128;UBERON:0004119!6.91e-08!130;UBERON:0000925!6.91e-08!130;UBERON:0006595!6.91e-08!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.85e-28,15;UBERON:0000331,2.93e-20,3;UBERON:0002116,2.93e-20,3;UBERON:0001204,2.93e-20,3;UBERON:0001168,2.93e-20,3;UBERON:0001242,2.15e-18,13;UBERON:0001262,2.15e-18,13;UBERON:0004786,2.15e-18,13;UBERON:0004923,2.23e-17,24;UBERON:0002108,2.28e-15,4;UBERON:0001962,1.05e-14,2;UBERON:0001961,1.05e-14,2;UBERON:0001744,1.05e-14,2;UBERON:0000160,4.01e-13,31;UBERON:0002465,4.07e-10,3;UBERON:0005409,2.03e-08,47;UBERON:0003199,2.98e-08,1;UBERON:0003350,1.69e-07,9;UBERON:0004808,1.69e-07,9;UBERON:0001277,1.69e-07,9 | |||
|phase1_expression=0,4.18770489167233,7.27998783023258,3.0246421130683,0.500895729946347,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.35877634027623,4.59385571292016,6.03066794622705,7.54149314400612,1.33016393619462,2.01624103807945,2.66076612786366,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:26237108..26237137,+ | |||
}} |
Latest revision as of 20:27, 4 August 2015
Short description: | p@chr7:26237108..26237137, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:26237108..26237137, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.85e-22 | 3 |
brush border epithelial cell | 5.52e-11 | 6 |
gut absorptive cell | 5.52e-11 | 6 |
enterocyte | 5.52e-11 | 6 |
epithelial cell | 7.91e-10 | 25 |
defensive cell | 1.00e-09 | 7 |
columnar/cuboidal epithelial cell | 1.71e-09 | 7 |
intestinal epithelial cell | 1.69e-07 | 9 |
epithelial cell of alimentary canal | 1.69e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.85e-28 | 15 |
ileal mucosa | 2.93e-20 | 3 |
ileum | 2.93e-20 | 3 |
mucosa of small intestine | 2.93e-20 | 3 |
wall of small intestine | 2.93e-20 | 3 |
intestinal mucosa | 2.15e-18 | 13 |
wall of intestine | 2.15e-18 | 13 |
gastrointestinal system mucosa | 2.15e-18 | 13 |
organ component layer | 2.23e-17 | 24 |
small intestine | 2.28e-15 | 4 |
gut-associated lymphoid tissue | 1.05e-14 | 2 |
mucosa-associated lymphoid tissue | 1.05e-14 | 2 |
lymphoid tissue | 1.05e-14 | 2 |
intestine | 4.01e-13 | 31 |
lymphoid system | 4.07e-10 | 3 |
gastrointestinal system | 2.03e-08 | 47 |
egg chamber | 2.98e-08 | 1 |
epithelium of mucosa | 1.69e-07 | 9 |
gastrointestinal system epithelium | 1.69e-07 | 9 |
intestinal epithelium | 1.69e-07 | 9 |