FFCP PHASE1:Mm9::chr17:36266380..36266408,-: Difference between revisions
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{{FFCP|EntrezGene=630294|HGNC=|MCL_coexpression_id=24|UniProt=Q0WXH6|association_with_transcript=-10bp_to_ENSMUST00000097143,ENSMUST00000172968,ENSMUST00000173322,NM_001177467,uc012ash.1,uc012asl.1_5end|description=CAGE_peak_1_at_Gm7030_5end|id=chr17:36266380..36266408,-|ontology_enrichment_celltype=CL:0000239!4.01e-16!6;CL:0000677!4.01e-16!6;CL:0000212!4.01e-16!6;CL:0000584!4.01e-16!6;CL:0000075!1.03e-13!7;CL:0002563!1.70e-10!9;CL:0002251!1.70e-10!9;CL:0000473!4.27e-09!3;CL:0000627!4.27e-09!3;CL:0000682!4.27e-09!3;CL:0000066!2.22e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,2.03e-22,6;CL:0000677,2.03e-22,6;CL:0000584,2.03e-22,6;CL:0000075,3.27e-19,7;CL:0000682,1.52e-16,3;CL:0002563,6.27e-15,9;CL:0002251,6.27e-15,9;CL:0000066,7.71e-13,25;CL:0002076,6.62e-09,15;CL:0000473,2.19e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.46e-29!43;UBERON:0000344!3.28e-24!15;UBERON:0005409!6.77e-20!59;UBERON:0001242!1.61e-19!13;UBERON:0000060!1.61e-19!13;UBERON:0001262!1.61e-19!13;UBERON:0004786!1.61e-19!13;UBERON:0004923!1.75e-16!24;UBERON:0003350!1.70e-10!9;UBERON:0004808!1.70e-10!9;UBERON:0001277!1.70e-10!9;UBERON:0000331!3.35e-09!3;UBERON:0002116!3.35e-09!3;UBERON:0001204!3.35e-09!3;UBERON:0001168!3.35e-09!3;UBERON:0000485!1.90e-08!11;UBERON:0001007!5.32e-08!128;UBERON:0001555!5.32e-08!128;UBERON:0007026!5.32e-08!128;UBERON:0004119!8.64e-08!130;UBERON:0000925!8.64e-08!130;UBERON:0006595!8.64e-08!130|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.01e-34,15;UBERON:0001242,1.26e-25,13;UBERON:0001262,1.26e-25,13;UBERON:0004786,1.26e-25,13;UBERON:0002108,3.22e-21,4;UBERON:0004923,6.09e-21,24;UBERON:0000331,9.38e-17,3;UBERON:0002116,9.38e-17,3;UBERON:0001204,9.38e-17,3;UBERON:0001168,9.38e-17,3;UBERON:0000160,9.38e-16,31;UBERON:0003350,6.27e-15,9;UBERON:0004808,6.27e-15,9;UBERON:0001277,6.27e-15,9;UBERON:0000485,3.39e-12,11;UBERON:0001962,2.70e-11,2;UBERON:0001961,2.70e-11,2;UBERON:0001744,2.70e-11,2;UBERON:0005409,6.24e-10,47;UBERON:0002465,8.07e-08,3|phase1_expression=0,8.72438519098403,6.82498859084304,21.4749590027849,29.0519523368881,0.16787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.63978026100879,3.44113921600755,3.44539178469012,11.630573896295,6.46413698057667,17.6721780094428,7.81293402255785,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0.170430322578058,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.58670339998127,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gm7030}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:630294 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q0WXH6 | |||
|association_with_transcript=-10bp_to_ENSMUST00000097143,ENSMUST00000172968,ENSMUST00000173322,NM_001177467,uc012ash.1,uc012asl.1_5end | |||
|cluster_id=chr17:36266380..36266408,- | |||
|description=CAGE_peak_1_at_Gm7030_5end | |||
|id=chr17:36266380..36266408,- | |||
|ontology_enrichment_celltype=CL:0000239!4.01e-16!6;CL:0000677!4.01e-16!6;CL:0000212!4.01e-16!6;CL:0000584!4.01e-16!6;CL:0000075!1.03e-13!7;CL:0002563!1.70e-10!9;CL:0002251!1.70e-10!9;CL:0000473!4.27e-09!3;CL:0000627!4.27e-09!3;CL:0000682!4.27e-09!3;CL:0000066!2.22e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.03e-22,6;CL:0000677,2.03e-22,6;CL:0000584,2.03e-22,6;CL:0000075,3.27e-19,7;CL:0000682,1.52e-16,3;CL:0002563,6.27e-15,9;CL:0002251,6.27e-15,9;CL:0000066,7.71e-13,25;CL:0002076,6.62e-09,15;CL:0000473,2.19e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.46e-29!43;UBERON:0000344!3.28e-24!15;UBERON:0005409!6.77e-20!59;UBERON:0001242!1.61e-19!13;UBERON:0000060!1.61e-19!13;UBERON:0001262!1.61e-19!13;UBERON:0004786!1.61e-19!13;UBERON:0004923!1.75e-16!24;UBERON:0003350!1.70e-10!9;UBERON:0004808!1.70e-10!9;UBERON:0001277!1.70e-10!9;UBERON:0000331!3.35e-09!3;UBERON:0002116!3.35e-09!3;UBERON:0001204!3.35e-09!3;UBERON:0001168!3.35e-09!3;UBERON:0000485!1.90e-08!11;UBERON:0001007!5.32e-08!128;UBERON:0001555!5.32e-08!128;UBERON:0007026!5.32e-08!128;UBERON:0004119!8.64e-08!130;UBERON:0000925!8.64e-08!130;UBERON:0006595!8.64e-08!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.01e-34,15;UBERON:0001242,1.26e-25,13;UBERON:0001262,1.26e-25,13;UBERON:0004786,1.26e-25,13;UBERON:0002108,3.22e-21,4;UBERON:0004923,6.09e-21,24;UBERON:0000331,9.38e-17,3;UBERON:0002116,9.38e-17,3;UBERON:0001204,9.38e-17,3;UBERON:0001168,9.38e-17,3;UBERON:0000160,9.38e-16,31;UBERON:0003350,6.27e-15,9;UBERON:0004808,6.27e-15,9;UBERON:0001277,6.27e-15,9;UBERON:0000485,3.39e-12,11;UBERON:0001962,2.70e-11,2;UBERON:0001961,2.70e-11,2;UBERON:0001744,2.70e-11,2;UBERON:0005409,6.24e-10,47;UBERON:0002465,8.07e-08,3 | |||
|phase1_expression=0,8.72438519098403,6.82498859084304,21.4749590027849,29.0519523368881,0.16787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.63978026100879,3.44113921600755,3.44539178469012,11.630573896295,6.46413698057667,17.6721780094428,7.81293402255785,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0.170430322578058,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.58670339998127,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm7030 | |||
}} |
Revision as of 20:39, 4 August 2015
Short description: | p1@Gm7030 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm7030_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -10bp_to_ENSMUST00000097143, ENSMUST00000172968, ENSMUST00000173322, NM_001177467, uc012ash.1, uc012asl.1_5end |
EntrezGene: | 630294 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.03e-22 | 6 |
gut absorptive cell | 2.03e-22 | 6 |
enterocyte | 2.03e-22 | 6 |
columnar/cuboidal epithelial cell | 3.27e-19 | 7 |
M cell of gut | 1.52e-16 | 3 |
intestinal epithelial cell | 6.27e-15 | 9 |
epithelial cell of alimentary canal | 6.27e-15 | 9 |
epithelial cell | 7.71e-13 | 25 |
endo-epithelial cell | 6.62e-09 | 15 |
defensive cell | 2.19e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.01e-34 | 15 |
intestinal mucosa | 1.26e-25 | 13 |
wall of intestine | 1.26e-25 | 13 |
gastrointestinal system mucosa | 1.26e-25 | 13 |
small intestine | 3.22e-21 | 4 |
organ component layer | 6.09e-21 | 24 |
ileal mucosa | 9.38e-17 | 3 |
ileum | 9.38e-17 | 3 |
mucosa of small intestine | 9.38e-17 | 3 |
wall of small intestine | 9.38e-17 | 3 |
intestine | 9.38e-16 | 31 |
epithelium of mucosa | 6.27e-15 | 9 |
gastrointestinal system epithelium | 6.27e-15 | 9 |
intestinal epithelium | 6.27e-15 | 9 |
simple columnar epithelium | 3.39e-12 | 11 |
gut-associated lymphoid tissue | 2.70e-11 | 2 |
mucosa-associated lymphoid tissue | 2.70e-11 | 2 |
lymphoid tissue | 2.70e-11 | 2 |
gastrointestinal system | 6.24e-10 | 47 |
lymphoid system | 8.07e-08 | 3 |