Personal tools

FFCP PHASE1:Mm9::chr4:136454741..136454753,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=12259|HGNC=|MCL_coexpression_id=38|UniProt=Q9DCM6|association_with_transcript=5bp_to_NM_007572,uc008vir.1_5end|description=CAGE_peak_3_at_C1qa_5end|id=chr4:136454741..136454753,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.68e-10!333;UBERON:0000926!1.76e-09!193;UBERON:0004120!1.76e-09!193;UBERON:0006603!1.76e-09!193;UBERON:0005172!2.83e-09!49;UBERON:0005173!2.83e-09!49;UBERON:0002417!2.83e-09!49;UBERON:0000916!2.83e-09!49;UBERON:0000922!3.08e-09!328;UBERON:0005177!3.98e-09!85;UBERON:0009569!6.21e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.88e-09,49;UBERON:0005173,1.88e-09,49;UBERON:0002417,1.88e-09,49;UBERON:0000916,1.88e-09,49;UBERON:0000949,6.76e-09,72;UBERON:0005177,7.46e-09,79;UBERON:0005256,1.45e-07,45;UBERON:0002100,1.96e-07,90;UBERON:0009854,3.02e-07,23;UBERON:0009856,3.02e-07,23;UBERON:0002365,4.22e-07,25;UBERON:0002330,4.22e-07,25;UBERON:0002075,7.29e-07,19;UBERON:0002107,8.88e-07,22;UBERON:0007499,8.88e-07,22;UBERON:0006925,8.88e-07,22;UBERON:0009497,8.88e-07,22;UBERON:0000015,8.88e-07,22;UBERON:0002423,8.88e-07,22;UBERON:0006235,8.88e-07,22;UBERON:0008835,8.88e-07,22;UBERON:0003894,8.88e-07,22;UBERON:0004161,8.88e-07,22;UBERON:0008836,8.88e-07,22|phase1_expression=1.28119077683835,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,3.33109761815663,0.607425802169478,2.79824751251259,0.473193248037357,1.23402990245165,2.12194825899015,0.595303031057488,0,0,0.159992422793407,0.68822784320151,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.218025156380447,0,0,1.39986421625363,0,0,0,0,0.257259436035947,2.0057340795713,3.6097046459421,1.21389876515759,0,1.26766280701236,0,0,130.485459005803,159.207484373283,171.936187816956,64.7136238719754,55.3274359663039,0.311068836925433,0.405017814995072,0.420649922702764,0.571301968807607,1.32521124570968,0.122490799214954,0.479227355091182,0,1.10115880999389,0.510749352340751,0.921639199537461,0.131886287730194,0.365950574409639,0.52091337055676,0.558365998002762,0,0.45839474333043,0.589257170947335,0.284743361598206,0.186399445825301,0.454357159999104,0.302286240427142,0.289864488701678,2.58127163094416,0,0,1.94932925234301,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.02765491747154,1.29468941823586,3.26572705942614,1.21439728736295,2.43572382649713,1.38369298353635,1.50722640552623,2.4693628498498,1.0053327306374,1.23597483867187,1.15679485535929,3.5384422077995,1.13236794963186,0,0.969750506270444,1.86391761218122,0,0.209446706813455,1.78819938646014,0,0,0,0.299581278809645,0,0.376963056338593,0.347648640384553,0.255715457330331,0.20778804455956,0.486723789203273,3.25885964321012,2.23932547098167,0.252722758433675,0.841767423545896,0.260240885925407,0.919608417733892,0.180062129805349,0.150704817835715,0.544291993210623,0.2562274405697,0.655912071918102,0,0.215567992932842,0.189106080167819,0.703804496655795,1.31517439456545,0,1.74126083261083,0.61734640922383,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.771335564436891,0.697601834251224,0.536546802799238,1.05088808130453,0.987359099480883,1.31333971263276,0.810688095458557,1.02339991197733,3.73235195994786,2.28150911892632,0.420579897128254,0.514523061896422,0,0.793351699990633,0.426576501070468,0.464473343720877,0.515469845288373,0.201683524623343,0.889512175379481,0.190225626112559,0.474529061544512,1.15289268306808,1.00534083520108,1.1937388322469,0.974820435595601,1.79763881730844,2.16138049874694,0.995706366271836,0.758671603812327,0.571242563048644,2.25415471346161,0.814605311381257,0.775809948670503,0.350679099451593,0.316182685621286,0.590440591918409,1.41298855057237,1.1105744752962,2.07516838961004,0.667380422864376,1.57247196090562,0.674586337154561,2.02860121388503,1.68824011826692,3.05551022137704,5.17853047411459,3.72911021582581,1.37280706594041,2.87536413054709,3.72140947668503,4.36852742360385,1.01031551178845,2.33216637578486,2.41221760681684,0.369506380333209,0.947457058852424,0.651859905768103,1.18821560042632,0.704070744865506,0.335012514883631,0.476087281772027,0.390267295715598,0.157635144106191,0.8858587585951,0.637819074629948,0.81931657357869,1.38147985492716,0.867894351489069,15.0791283939272,3.80733978673097,1.47529281905711,0.827810238914197,0.481651769963376,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,1.56134093729095,1.24645922567079,2.11753047159649,2.8044920905331,0,0.728341908464944,1.209294227859,1.50884063804718,1.18120757152309,2.76691633149535,2.06742634534577,2.90826983582004,1.42598951353889,1.58018378967908,2.10837217149998,2.06271086496374,0.340439605753788,0.900305470156551,1.16422815404479,0.643011105094777,0.886701168211368,2.49716344642899,2.13913726782757,2.74018454203139,0,0.42366414172764,0.220528398054962,0.65954501176592,1.77610869365496,0.72375509913787,0.716234064018819,1.14898629821543,2.33184669303881,0.18542530201051,3.41741761595705,2.27025554759545,4.44466865687308,0.941842285023455,0.820165366326151,3.66045077130436,0,0,0,0,0.474503990371703,0.813277868507395,0.648032044930808,0.836353184057875,1.74690050996942,0.674321731924103,1.1571483801547,2.35580347785627,0.777689839750757,1.86401793926078,0,0.448549638131936,0.165458490457098,0,1.03327858782185,0.506868376472335,0.117357238645754,0.5208175393758,0.419437377702843,0.241584120826006,0,2.21207784439725,2.22997736819181,1.54066435747241,0.51968329191118,1.43221356533985,0.79472541912506,1.08175904567972,0.590758108698309,0.403865799792591,0.457240839929999,0.302478555410522,1.16949456887703,0.673482891482306,0.467507608726276,0.453460767230423,0,0,0,2.12508553435409,2.62755465631655,1.64836461840539,0.214368379079066,0.501572104035363,0,0.920650473014354,0,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0.972426868273176,0.209613162627982,0.919217542250071,1.11123363900808,0.824140228955577,0.64183841918363,1.51618327058278,1.2673964994512,1.13175804831646,0.561849044819294,1.15245274328765,0.689225627467359,0.952587382566147,0.927074607558844,1.35036454324594,2.06042950401653,0.883193520806384,2.05721551431249,0.354951612318675,0.238436189947321,0.726732083161643,1.31753132581463,1.35383372626682,1.46342378298218,1.05227884575137,1.08643291076689,1.12228454331548,1.18635018124174,0.788035859004508,0.818462086339379,1.08455788830176,0.771626443924566,1.49886346762768,1.16965804222704,0.859484216193193,0.956441660344217,0.882365676478062,0.231867835620421|short_description=p3@C1qa}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12259
|HGNC=
|MCL_coexpression_id=38
|TSSclassifier=NA
|UniProt=uniprot:Q9DCM6
|association_with_transcript=5bp_to_NM_007572,uc008vir.1_5end
|cluster_id=chr4:136454741..136454753,-
|description=CAGE_peak_3_at_C1qa_5end
|id=chr4:136454741..136454753,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!1.68e-10!333;UBERON:0000926!1.76e-09!193;UBERON:0004120!1.76e-09!193;UBERON:0006603!1.76e-09!193;UBERON:0005172!2.83e-09!49;UBERON:0005173!2.83e-09!49;UBERON:0002417!2.83e-09!49;UBERON:0000916!2.83e-09!49;UBERON:0000922!3.08e-09!328;UBERON:0005177!3.98e-09!85;UBERON:0009569!6.21e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.88e-09,49;UBERON:0005173,1.88e-09,49;UBERON:0002417,1.88e-09,49;UBERON:0000916,1.88e-09,49;UBERON:0000949,6.76e-09,72;UBERON:0005177,7.46e-09,79;UBERON:0005256,1.45e-07,45;UBERON:0002100,1.96e-07,90;UBERON:0009854,3.02e-07,23;UBERON:0009856,3.02e-07,23;UBERON:0002365,4.22e-07,25;UBERON:0002330,4.22e-07,25;UBERON:0002075,7.29e-07,19;UBERON:0002107,8.88e-07,22;UBERON:0007499,8.88e-07,22;UBERON:0006925,8.88e-07,22;UBERON:0009497,8.88e-07,22;UBERON:0000015,8.88e-07,22;UBERON:0002423,8.88e-07,22;UBERON:0006235,8.88e-07,22;UBERON:0008835,8.88e-07,22;UBERON:0003894,8.88e-07,22;UBERON:0004161,8.88e-07,22;UBERON:0008836,8.88e-07,22
|phase1_expression=1.28119077683835,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,3.33109761815663,0.607425802169478,2.79824751251259,0.473193248037357,1.23402990245165,2.12194825899015,0.595303031057488,0,0,0.159992422793407,0.68822784320151,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.218025156380447,0,0,1.39986421625363,0,0,0,0,0.257259436035947,2.0057340795713,3.6097046459421,1.21389876515759,0,1.26766280701236,0,0,130.485459005803,159.207484373283,171.936187816956,64.7136238719754,55.3274359663039,0.311068836925433,0.405017814995072,0.420649922702764,0.571301968807607,1.32521124570968,0.122490799214954,0.479227355091182,0,1.10115880999389,0.510749352340751,0.921639199537461,0.131886287730194,0.365950574409639,0.52091337055676,0.558365998002762,0,0.45839474333043,0.589257170947335,0.284743361598206,0.186399445825301,0.454357159999104,0.302286240427142,0.289864488701678,2.58127163094416,0,0,1.94932925234301,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.02765491747154,1.29468941823586,3.26572705942614,1.21439728736295,2.43572382649713,1.38369298353635,1.50722640552623,2.4693628498498,1.0053327306374,1.23597483867187,1.15679485535929,3.5384422077995,1.13236794963186,0,0.969750506270444,1.86391761218122,0,0.209446706813455,1.78819938646014,0,0,0,0.299581278809645,0,0.376963056338593,0.347648640384553,0.255715457330331,0.20778804455956,0.486723789203273,3.25885964321012,2.23932547098167,0.252722758433675,0.841767423545896,0.260240885925407,0.919608417733892,0.180062129805349,0.150704817835715,0.544291993210623,0.2562274405697,0.655912071918102,0,0.215567992932842,0.189106080167819,0.703804496655795,1.31517439456545,0,1.74126083261083,0.61734640922383,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.771335564436891,0.697601834251224,0.536546802799238,1.05088808130453,0.987359099480883,1.31333971263276,0.810688095458557,1.02339991197733,3.73235195994786,2.28150911892632,0.420579897128254,0.514523061896422,0,0.793351699990633,0.426576501070468,0.464473343720877,0.515469845288373,0.201683524623343,0.889512175379481,0.190225626112559,0.474529061544512,1.15289268306808,1.00534083520108,1.1937388322469,0.974820435595601,1.79763881730844,2.16138049874694,0.995706366271836,0.758671603812327,0.571242563048644,2.25415471346161,0.814605311381257,0.775809948670503,0.350679099451593,0.316182685621286,0.590440591918409,1.41298855057237,1.1105744752962,2.07516838961004,0.667380422864376,1.57247196090562,0.674586337154561,2.02860121388503,1.68824011826692,3.05551022137704,5.17853047411459,3.72911021582581,1.37280706594041,2.87536413054709,3.72140947668503,4.36852742360385,1.01031551178845,2.33216637578486,2.41221760681684,0.369506380333209,0.947457058852424,0.651859905768103,1.18821560042632,0.704070744865506,0.335012514883631,0.476087281772027,0.390267295715598,0.157635144106191,0.8858587585951,0.637819074629948,0.81931657357869,1.38147985492716,0.867894351489069,15.0791283939272,3.80733978673097,1.47529281905711,0.827810238914197,0.481651769963376,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,1.56134093729095,1.24645922567079,2.11753047159649,2.8044920905331,0,0.728341908464944,1.209294227859,1.50884063804718,1.18120757152309,2.76691633149535,2.06742634534577,2.90826983582004,1.42598951353889,1.58018378967908,2.10837217149998,2.06271086496374,0.340439605753788,0.900305470156551,1.16422815404479,0.643011105094777,0.886701168211368,2.49716344642899,2.13913726782757,2.74018454203139,0,0.42366414172764,0.220528398054962,0.65954501176592,1.77610869365496,0.72375509913787,0.716234064018819,1.14898629821543,2.33184669303881,0.18542530201051,3.41741761595705,2.27025554759545,4.44466865687308,0.941842285023455,0.820165366326151,3.66045077130436,0,0,0,0,0.474503990371703,0.813277868507395,0.648032044930808,0.836353184057875,1.74690050996942,0.674321731924103,1.1571483801547,2.35580347785627,0.777689839750757,1.86401793926078,0,0.448549638131936,0.165458490457098,0,1.03327858782185,0.506868376472335,0.117357238645754,0.5208175393758,0.419437377702843,0.241584120826006,0,2.21207784439725,2.22997736819181,1.54066435747241,0.51968329191118,1.43221356533985,0.79472541912506,1.08175904567972,0.590758108698309,0.403865799792591,0.457240839929999,0.302478555410522,1.16949456887703,0.673482891482306,0.467507608726276,0.453460767230423,0,0,0,2.12508553435409,2.62755465631655,1.64836461840539,0.214368379079066,0.501572104035363,0,0.920650473014354,0,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0.972426868273176,0.209613162627982,0.919217542250071,1.11123363900808,0.824140228955577,0.64183841918363,1.51618327058278,1.2673964994512,1.13175804831646,0.561849044819294,1.15245274328765,0.689225627467359,0.952587382566147,0.927074607558844,1.35036454324594,2.06042950401653,0.883193520806384,2.05721551431249,0.354951612318675,0.238436189947321,0.726732083161643,1.31753132581463,1.35383372626682,1.46342378298218,1.05227884575137,1.08643291076689,1.12228454331548,1.18635018124174,0.788035859004508,0.818462086339379,1.08455788830176,0.771626443924566,1.49886346762768,1.16965804222704,0.859484216193193,0.956441660344217,0.882365676478062,0.231867835620421
|short_description=p3@C1qa
}}

Revision as of 00:00, 5 August 2015

Short description:p3@C1qa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_C1qa_5end
Coexpression cluster:MCL_coexpression_mm9:38
Association with transcript: 5bp_to_NM_007572, uc008vir.1_5end
EntrezGene:12259
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@C1qa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7130.49
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7159.21
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2171.94
Mouse Microglia, donor1.CNhs12629.11718-123C864.71
Mouse Microglia, donor2.CNhs12634.11736-123E855.33
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
abdomen element1.88e-0949
abdominal segment element1.88e-0949
abdominal segment of trunk1.88e-0949
abdomen1.88e-0949
endocrine system6.76e-0972
trunk region element7.46e-0979
trunk mesenchyme1.45e-0745
trunk1.96e-0790
digestive tract diverticulum3.02e-0723
sac3.02e-0723
exocrine gland4.22e-0725
exocrine system4.22e-0725
viscus7.29e-0719
liver8.88e-0722
epithelial sac8.88e-0722
digestive gland8.88e-0722
epithelium of foregut-midgut junction8.88e-0722
anatomical boundary8.88e-0722
hepatobiliary system8.88e-0722
foregut-midgut junction8.88e-0722
hepatic diverticulum8.88e-0722
liver primordium8.88e-0722
septum transversum8.88e-0722
liver bud8.88e-0722
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:136454741..136454753,-&oldid=3836258"