FFCP PHASE1:Mm9::chr6:121788643..121788657,+: Difference between revisions
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{{FFCP|EntrezGene=17836,640530|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=47bp_to_ENSMUST00000148563_5end|description=CAGE_peak_1_at_Gm7298_5end,CAGE_peak_1_at_Mug1_5end|id=chr6:121788643..121788657,+|ontology_enrichment_celltype=CL:0000181!5.05e-15!5;CL:0000417!5.05e-15!5;CL:0000668!5.05e-15!5;CL:0000412!5.05e-15!5;CL:0000182!5.05e-15!5;CL:0000414!7.15e-07!11|ontology_enrichment_celltype_v019_2=CL:0000182,1.25e-24,5;CL:0000057,1.24e-08,1;CL:0000632,1.24e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!9.20e-23!22;UBERON:0007499!9.20e-23!22;UBERON:0006925!9.20e-23!22;UBERON:0009497!9.20e-23!22;UBERON:0000015!9.20e-23!22;UBERON:0002423!9.20e-23!22;UBERON:0006235!9.20e-23!22;UBERON:0008835!9.20e-23!22;UBERON:0003894!9.20e-23!22;UBERON:0004161!9.20e-23!22;UBERON:0008836!9.20e-23!22;UBERON:0009854!1.07e-21!23;UBERON:0009856!1.07e-21!23;UBERON:0002365!8.11e-20!25;UBERON:0002330!8.11e-20!25;UBERON:0005172!5.03e-15!49;UBERON:0005173!5.03e-15!49;UBERON:0002417!5.03e-15!49;UBERON:0000916!5.03e-15!49;UBERON:0005256!1.43e-13!47;UBERON:0003914!1.55e-11!47;UBERON:0009569!1.55e-10!66;UBERON:0002368!3.81e-10!60;UBERON:0002530!3.42e-09!65;UBERON:0005057!8.80e-09!51;UBERON:0000949!4.43e-08!72;UBERON:0003929!5.22e-08!55;UBERON:0005177!1.23e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.05e-32,22;UBERON:0007499,1.05e-32,22;UBERON:0006925,1.05e-32,22;UBERON:0009497,1.05e-32,22;UBERON:0000015,1.05e-32,22;UBERON:0002423,1.05e-32,22;UBERON:0006235,1.05e-32,22;UBERON:0008835,1.05e-32,22;UBERON:0003894,1.05e-32,22;UBERON:0004161,1.05e-32,22;UBERON:0008836,1.05e-32,22;UBERON:0009854,2.97e-31,23;UBERON:0009856,2.97e-31,23;UBERON:0002365,1.06e-28,25;UBERON:0002330,1.06e-28,25;UBERON:0005256,1.29e-15,45;UBERON:0003914,6.45e-15,47;UBERON:0005172,2.83e-14,49;UBERON:0005173,2.83e-14,49;UBERON:0002417,2.83e-14,49;UBERON:0000916,2.83e-14,49;UBERON:0003929,1.26e-12,55;UBERON:0002368,1.69e-11,60;UBERON:0003104,2.69e-11,61;UBERON:0009142,2.69e-11,61;UBERON:0002530,1.52e-10,65;UBERON:0000490,2.26e-10,66;UBERON:0009569,2.26e-10,66;UBERON:0005911,7.00e-10,69;UBERON:0000949,1.98e-09,72;UBERON:0005177,1.64e-08,79;UBERON:0001041,2.16e-08,80;UBERON:0002100,2.38e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0459342777394,17.6792546764015,34.0013010731825,35.0879265421741,44.3546618226362,3.5111105032938,0,0,0,0,0,0,0,0,0,0,11.5325718516251,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,10.3758419480502,0,0,0,0,0,0,0,0,1.09824565275233,0,0.744281895337007,0,9.59799736199025,18.8367284198008,31.8412724099822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gm7298,p1@Mug1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17836,entrezgene:640530 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENSMUST00000148563_5end | |||
|cluster_id=chr6:121788643..121788657,+ | |||
|description=CAGE_peak_1_at_Gm7298_5end,CAGE_peak_1_at_Mug1_5end | |||
|id=chr6:121788643..121788657,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.05e-15!5;CL:0000417!5.05e-15!5;CL:0000668!5.05e-15!5;CL:0000412!5.05e-15!5;CL:0000182!5.05e-15!5;CL:0000414!7.15e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.25e-24,5;CL:0000057,1.24e-08,1;CL:0000632,1.24e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.20e-23!22;UBERON:0007499!9.20e-23!22;UBERON:0006925!9.20e-23!22;UBERON:0009497!9.20e-23!22;UBERON:0000015!9.20e-23!22;UBERON:0002423!9.20e-23!22;UBERON:0006235!9.20e-23!22;UBERON:0008835!9.20e-23!22;UBERON:0003894!9.20e-23!22;UBERON:0004161!9.20e-23!22;UBERON:0008836!9.20e-23!22;UBERON:0009854!1.07e-21!23;UBERON:0009856!1.07e-21!23;UBERON:0002365!8.11e-20!25;UBERON:0002330!8.11e-20!25;UBERON:0005172!5.03e-15!49;UBERON:0005173!5.03e-15!49;UBERON:0002417!5.03e-15!49;UBERON:0000916!5.03e-15!49;UBERON:0005256!1.43e-13!47;UBERON:0003914!1.55e-11!47;UBERON:0009569!1.55e-10!66;UBERON:0002368!3.81e-10!60;UBERON:0002530!3.42e-09!65;UBERON:0005057!8.80e-09!51;UBERON:0000949!4.43e-08!72;UBERON:0003929!5.22e-08!55;UBERON:0005177!1.23e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.05e-32,22;UBERON:0007499,1.05e-32,22;UBERON:0006925,1.05e-32,22;UBERON:0009497,1.05e-32,22;UBERON:0000015,1.05e-32,22;UBERON:0002423,1.05e-32,22;UBERON:0006235,1.05e-32,22;UBERON:0008835,1.05e-32,22;UBERON:0003894,1.05e-32,22;UBERON:0004161,1.05e-32,22;UBERON:0008836,1.05e-32,22;UBERON:0009854,2.97e-31,23;UBERON:0009856,2.97e-31,23;UBERON:0002365,1.06e-28,25;UBERON:0002330,1.06e-28,25;UBERON:0005256,1.29e-15,45;UBERON:0003914,6.45e-15,47;UBERON:0005172,2.83e-14,49;UBERON:0005173,2.83e-14,49;UBERON:0002417,2.83e-14,49;UBERON:0000916,2.83e-14,49;UBERON:0003929,1.26e-12,55;UBERON:0002368,1.69e-11,60;UBERON:0003104,2.69e-11,61;UBERON:0009142,2.69e-11,61;UBERON:0002530,1.52e-10,65;UBERON:0000490,2.26e-10,66;UBERON:0009569,2.26e-10,66;UBERON:0005911,7.00e-10,69;UBERON:0000949,1.98e-09,72;UBERON:0005177,1.64e-08,79;UBERON:0001041,2.16e-08,80;UBERON:0002100,2.38e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0459342777394,17.6792546764015,34.0013010731825,35.0879265421741,44.3546618226362,3.5111105032938,0,0,0,0,0,0,0,0,0,0,11.5325718516251,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,10.3758419480502,0,0,0,0,0,0,0,0,1.09824565275233,0,0.744281895337007,0,9.59799736199025,18.8367284198008,31.8412724099822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm7298,p1@Mug1 | |||
}} |
Revision as of 01:25, 5 August 2015
Short description: | p1@Gm7298, p1@Mug1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm7298_5end, CAGE_peak_1_at_Mug1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 47bp_to_ENSMUST00000148563_5end |
EntrezGene: | 17836,640530 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.25e-24 | 5 |
fibroblast | 1.24e-08 | 1 |
hepatic stellate cell | 1.24e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.05e-32 | 22 |
epithelial sac | 1.05e-32 | 22 |
digestive gland | 1.05e-32 | 22 |
epithelium of foregut-midgut junction | 1.05e-32 | 22 |
anatomical boundary | 1.05e-32 | 22 |
hepatobiliary system | 1.05e-32 | 22 |
foregut-midgut junction | 1.05e-32 | 22 |
hepatic diverticulum | 1.05e-32 | 22 |
liver primordium | 1.05e-32 | 22 |
septum transversum | 1.05e-32 | 22 |
liver bud | 1.05e-32 | 22 |
digestive tract diverticulum | 2.97e-31 | 23 |
sac | 2.97e-31 | 23 |
exocrine gland | 1.06e-28 | 25 |
exocrine system | 1.06e-28 | 25 |
trunk mesenchyme | 1.29e-15 | 45 |
epithelial tube | 6.45e-15 | 47 |
abdomen element | 2.83e-14 | 49 |
abdominal segment element | 2.83e-14 | 49 |
abdominal segment of trunk | 2.83e-14 | 49 |
abdomen | 2.83e-14 | 49 |
gut epithelium | 1.26e-12 | 55 |
endocrine gland | 1.69e-11 | 60 |
mesenchyme | 2.69e-11 | 61 |
entire embryonic mesenchyme | 2.69e-11 | 61 |
gland | 1.52e-10 | 65 |
unilaminar epithelium | 2.26e-10 | 66 |
subdivision of trunk | 2.26e-10 | 66 |
endo-epithelium | 7.00e-10 | 69 |
endocrine system | 1.98e-09 | 72 |
trunk region element | 1.64e-08 | 79 |
foregut | 2.16e-08 | 80 |
trunk | 2.38e-07 | 90 |