FFCP PHASE1:Mm9::chr4:14791347..14791481,+: Difference between revisions
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{{FFCP|EntrezGene=72519|HGNC=|UniProt=A2AP25,Q9CZX7|association_with_transcript=0bp_to_NM_028264,uc008sbg.1_5end|description=CAGE_peak_1_at_Tmem55a_5end|id=chr4:14791347..14791481,+|ontology_enrichment_celltype=CL:0000055!1.06e-08!50;CL:0002321!1.63e-08!70;CL:0000220!1.63e-08!70;CL:0000107!1.59e-07!9;CL:0000221!5.83e-07!44;CL:0000133!5.83e-07!44;CL:0002319!8.98e-07!43|ontology_enrichment_celltype_v019_2=CL:0002321,1.63e-08,70;CL:0000107,1.59e-07,9;CL:0000221,5.83e-07,44;CL:0000133,5.83e-07,44;CL:0002319,8.98e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.26e-10!75;UBERON:0001016!2.26e-10!75;UBERON:0004121!8.26e-10!102;UBERON:0000924!8.26e-10!102;UBERON:0006601!8.26e-10!102;UBERON:0001017!2.17e-09!73;UBERON:0005743!2.17e-09!73;UBERON:0000010!8.21e-09!11;UBERON:0003103!3.96e-08!43;UBERON:0002410!1.59e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.26e-10,75;UBERON:0010314,8.09e-10,92;UBERON:0004121,1.65e-09,95;UBERON:0000924,1.65e-09,95;UBERON:0006601,1.65e-09,95;UBERON:0001017,2.17e-09,73;UBERON:0000010,8.21e-09,11;UBERON:0003103,3.96e-08,43;UBERON:0002410,1.59e-07,9|phase1_expression=38.7560209993601,43.6219259549201,41.4049307844478,31.4562779759103,26.5474736871564,39.9552667150298,38.0788604170707,13.5579489613655,1.68946466582,2.57470978954193,1.54096171402954,2.55270908785077,15.0656642339461,18.1834437031515,13.3243904726265,8.70643649776252,18.1886088313318,9.46386496074713,9.04955261797876,5.94145512517242,23.8971645324506,12.9078236561151,13.3211892460857,37.9182042020374,27.7585230091276,32.7312219545562,34.0301976965669,42.2323616064343,30.9738173713889,21.926621289114,34.3682291515722,44.4521471421742,39.3641464054125,47.5445043046316,21.9527231010969,23.9377889316229,23.2753066139101,18.4153917524239,12.5013655123808,17.7998072951091,22.3527965451785,21.1744100337118,19.9059244742773,61.4376471720817,55.6559352395135,51.3930906052708,50.0730460382745,88.0821631777004,63.0499344447934,78.3552493269362,65.653631742295,79.0639104007344,5.70460860596304,19.5847778343063,14.7881271622684,80.7794629152874,93.9829682999122,74.2567812879517,34.5961148069912,23.8045940672415,40.5652098243955,52.1820579386463,60.4720461355575,44.9949858640699,43.5101199529469,39.7868864369816,43.4420160251687,46.4904149439081,28.2035745479059,30.2413301862987,31.7590691640587,41.1337417541477,34.2346238475001,35.0323685754769,26.0699681169603,30.3342199581307,74.8787990795843,59.2469248715271,61.9034329022661,29.4106421638332,26.805879575506,31.7757156039624,51.9280378142569,50.0858722928195,52.1042024918922,46.8459450903132,46.6979113021058,38.3982858400119,79.2095982265105,113.886341080926,31.3053647797812,24.0918685554788,72.7569327067293,26.445456390253,44.1847963864415,45.2507155968309,24.8586623633201,61.3549161281008,58.4518510356455,51.5875778785097,46.9008587856346,61.5967091588726,50.9610479413291,28.4426681261332,58.669072114039,67.1403643509011,66.2237022969366,30.9438314038652,22.2686579936568,47.9468109179384,34.8705506799933,42.9296324420119,42.2026359978587,41.7501714330764,45.6244183686535,35.4379787549685,68.7202010301559,37.1620347284173,31.8459798701955,34.779872738693,23.8508839937225,27.6378894287077,27.9587641827183,45.6738043338014,38.9570874673026,25.2902484656505,12.3409578241098,9.59844369589452,12.7070227073065,62.7622779106207,43.0050566649509,24.12563560567,58.7526202249894,34.010155824934,47.1678861150201,36.9910079794487,47.0497860988461,27.6183474754407,43.9737599674594,34.5124643653817,64.9301010383892,54.4867987507331,51.6778312541352,43.2522827188502,43.8835419526065,44.4554609388429,37.2932863747721,36.9945820156792,55.8321101696061,55.2189754090032,48.5625102692499,39.0168403721083,38.6485676423581,33.0839558196058,32.5135775524551,44.1856072337055,10.5331978096985,15.9555702411123,18.1864639613179,58.616593627547,48.3123683561058,51.8578737007723,53.7410549778427,48.4040010098613,49.5197432368484,51.855069679341,49.8988526603292,54.9964762549368,55.7857891206699,41.5343684120111,40.8586800111113,38.8891966551384,40.6167713288444,37.3093844153833,44.7917590441591,24.9029161957868,46.9194671836993,27.5028589330086,62.0668809057531,64.5617947772019,45.7479487693431,52.8410834513157,50.2574379089407,51.1706934242784,24.2009821387701,45.456911503827,38.9569573640418,35.0163390792425,29.6345412421063,26.9645822596266,25.7204279350886,26.4857893428308,63.3490789183293,49.5838544726223,43.9560169125014,55.5968125017708,45.578834484392,52.1109141785067,44.2023394498558,34.0979441832881,45.2156336183159,45.9037449789098,35.2778626233707,33.0353309317866,29.8769672572069,27.8829019357219,26.1689556591169,28.2177276910328,27.4995919923933,32.7973596693924,32.4270453550071,30.7508782770651,41.6927798929328,30.8876986564858,32.4519180039143,39.4023049597494,32.650329260988,30.3939418458921,31.777548708656,57.0369149429159,60.1340763071075,44.9824477304249,42.9483154367959,35.8463390925486,39.5152443870783,40.97806605013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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72519 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AP25,uniprot:Q9CZX7 | |||
|association_with_transcript=0bp_to_NM_028264,uc008sbg.1_5end | |||
|cluster_id=chr4:14791347..14791481,+ | |||
|description=CAGE_peak_1_at_Tmem55a_5end | |||
|id=chr4:14791347..14791481,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.06e-08!50;CL:0002321!1.63e-08!70;CL:0000220!1.63e-08!70;CL:0000107!1.59e-07!9;CL:0000221!5.83e-07!44;CL:0000133!5.83e-07!44;CL:0002319!8.98e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.63e-08,70;CL:0000107,1.59e-07,9;CL:0000221,5.83e-07,44;CL:0000133,5.83e-07,44;CL:0002319,8.98e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.26e-10!75;UBERON:0001016!2.26e-10!75;UBERON:0004121!8.26e-10!102;UBERON:0000924!8.26e-10!102;UBERON:0006601!8.26e-10!102;UBERON:0001017!2.17e-09!73;UBERON:0005743!2.17e-09!73;UBERON:0000010!8.21e-09!11;UBERON:0003103!3.96e-08!43;UBERON:0002410!1.59e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.26e-10,75;UBERON:0010314,8.09e-10,92;UBERON:0004121,1.65e-09,95;UBERON:0000924,1.65e-09,95;UBERON:0006601,1.65e-09,95;UBERON:0001017,2.17e-09,73;UBERON:0000010,8.21e-09,11;UBERON:0003103,3.96e-08,43;UBERON:0002410,1.59e-07,9 | |||
|phase1_expression=38.7560209993601,43.6219259549201,41.4049307844478,31.4562779759103,26.5474736871564,39.9552667150298,38.0788604170707,13.5579489613655,1.68946466582,2.57470978954193,1.54096171402954,2.55270908785077,15.0656642339461,18.1834437031515,13.3243904726265,8.70643649776252,18.1886088313318,9.46386496074713,9.04955261797876,5.94145512517242,23.8971645324506,12.9078236561151,13.3211892460857,37.9182042020374,27.7585230091276,32.7312219545562,34.0301976965669,42.2323616064343,30.9738173713889,21.926621289114,34.3682291515722,44.4521471421742,39.3641464054125,47.5445043046316,21.9527231010969,23.9377889316229,23.2753066139101,18.4153917524239,12.5013655123808,17.7998072951091,22.3527965451785,21.1744100337118,19.9059244742773,61.4376471720817,55.6559352395135,51.3930906052708,50.0730460382745,88.0821631777004,63.0499344447934,78.3552493269362,65.653631742295,79.0639104007344,5.70460860596304,19.5847778343063,14.7881271622684,80.7794629152874,93.9829682999122,74.2567812879517,34.5961148069912,23.8045940672415,40.5652098243955,52.1820579386463,60.4720461355575,44.9949858640699,43.5101199529469,39.7868864369816,43.4420160251687,46.4904149439081,28.2035745479059,30.2413301862987,31.7590691640587,41.1337417541477,34.2346238475001,35.0323685754769,26.0699681169603,30.3342199581307,74.8787990795843,59.2469248715271,61.9034329022661,29.4106421638332,26.805879575506,31.7757156039624,51.9280378142569,50.0858722928195,52.1042024918922,46.8459450903132,46.6979113021058,38.3982858400119,79.2095982265105,113.886341080926,31.3053647797812,24.0918685554788,72.7569327067293,26.445456390253,44.1847963864415,45.2507155968309,24.8586623633201,61.3549161281008,58.4518510356455,51.5875778785097,46.9008587856346,61.5967091588726,50.9610479413291,28.4426681261332,58.669072114039,67.1403643509011,66.2237022969366,30.9438314038652,22.2686579936568,47.9468109179384,34.8705506799933,42.9296324420119,42.2026359978587,41.7501714330764,45.6244183686535,35.4379787549685,68.7202010301559,37.1620347284173,31.8459798701955,34.779872738693,23.8508839937225,27.6378894287077,27.9587641827183,45.6738043338014,38.9570874673026,25.2902484656505,12.3409578241098,9.59844369589452,12.7070227073065,62.7622779106207,43.0050566649509,24.12563560567,58.7526202249894,34.010155824934,47.1678861150201,36.9910079794487,47.0497860988461,27.6183474754407,43.9737599674594,34.5124643653817,64.9301010383892,54.4867987507331,51.6778312541352,43.2522827188502,43.8835419526065,44.4554609388429,37.2932863747721,36.9945820156792,55.8321101696061,55.2189754090032,48.5625102692499,39.0168403721083,38.6485676423581,33.0839558196058,32.5135775524551,44.1856072337055,10.5331978096985,15.9555702411123,18.1864639613179,58.616593627547,48.3123683561058,51.8578737007723,53.7410549778427,48.4040010098613,49.5197432368484,51.855069679341,49.8988526603292,54.9964762549368,55.7857891206699,41.5343684120111,40.8586800111113,38.8891966551384,40.6167713288444,37.3093844153833,44.7917590441591,24.9029161957868,46.9194671836993,27.5028589330086,62.0668809057531,64.5617947772019,45.7479487693431,52.8410834513157,50.2574379089407,51.1706934242784,24.2009821387701,45.456911503827,38.9569573640418,35.0163390792425,29.6345412421063,26.9645822596266,25.7204279350886,26.4857893428308,63.3490789183293,49.5838544726223,43.9560169125014,55.5968125017708,45.578834484392,52.1109141785067,44.2023394498558,34.0979441832881,45.2156336183159,45.9037449789098,35.2778626233707,33.0353309317866,29.8769672572069,27.8829019357219,26.1689556591169,28.2177276910328,27.4995919923933,32.7973596693924,32.4270453550071,30.7508782770651,41.6927798929328,30.8876986564858,32.4519180039143,39.4023049597494,32.650329260988,30.3939418458921,31.777548708656,57.0369149429159,60.1340763071075,44.9824477304249,42.9483154367959,35.8463390925486,39.5152443870783,40.9780660501378,37.8324345854858,40.306573516077,35.2395038733046,26.3819936692338,33.155516518252,25.6028833689276,76.9035548090288,71.7955502640697,38.3576132954848,32.5605360639584,52.9816946959713,43.4855357257074,44.5903051424557,46.707121532809,104.117712407365,121.036010731958,104.480347900407,126.653462914853,105.829370189137,124.553673547086,121.443210502468,105.504364705984,102.37953448815,56.552551690238,39.1754635174821,36.5034487517873,43.3279311880512,40.0877398823261,53.0980553359851,42.0010500548118,45.9531806586422,45.2652191414155,36.9127366100966,51.034234558692,42.6406683727565,50.8947221268508,34.580245703318,34.4480066150039,37.9506990869996,42.2855727317566,43.5762695364849,60.3204665004889,49.9324519401432,45.6537884617292,54.7981321954625,39.9546151428638,37.0235296354772,24.3571959291679,37.7821449982574,19.9122146611991,33.5203165043542,17.4779428117969,44.5641817680699,29.3120815150837,18.2639686324799,17.2347944732314,30.3140070095045,52.8462110729953,13.1570578214347,34.0538332139317,25.9272338317596,16.3880557594081,11.8923978117292,8.23601423543482,8.32894306969891,11.3360676382163,10.7795979567451,46.7788602827406,67.53773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| |||
|short_description=p1@Tmem55a | |||
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Revision as of 04:23, 5 August 2015
Short description: | p1@Tmem55a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem55a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_028264, uc008sbg.1_5end |
EntrezGene: | 72519 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.63e-08 | 70 |
autonomic neuron | 1.59e-07 | 9 |
ectodermal cell | 5.83e-07 | 44 |
neurectodermal cell | 5.83e-07 | 44 |
neural cell | 8.98e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.26e-10 | 75 |
structure with developmental contribution from neural crest | 8.09e-10 | 92 |
ectoderm-derived structure | 1.65e-09 | 95 |
ectoderm | 1.65e-09 | 95 |
presumptive ectoderm | 1.65e-09 | 95 |
central nervous system | 2.17e-09 | 73 |
peripheral nervous system | 8.21e-09 | 11 |
compound organ | 3.96e-08 | 43 |
autonomic nervous system | 1.59e-07 | 9 |