FFCP PHASE1:Mm9::chr2:52228080..52228089,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2191|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:52228080..52228089,-|id=chr2:52228080..52228089,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.24e-20,5;CL:0000057,2.59e-12,1;CL:0000632,2.59e-12,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005418!8.13e-08!5;UBERON:0002472!8.13e-08!5;UBERON:0008784!8.13e-08!5;UBERON:0006058!8.13e-08!5;UBERON:0004709!8.13e-08!5;UBERON:0005420!8.13e-08!5;UBERON:0006057!8.13e-08!5;UBERON:0000978!8.13e-08!5;UBERON:0002103!8.13e-08!5;UBERON:0000376!8.13e-08!5;UBERON:0000154!8.13e-08!5;UBERON:0005730!8.13e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.14e-12,22;UBERON:0007499,1.14e-12,22;UBERON:0006925,1.14e-12,22;UBERON:0009497,1.14e-12,22;UBERON:0000015,1.14e-12,22;UBERON:0002423,1.14e-12,22;UBERON:0006235,1.14e-12,22;UBERON:0008835,1.14e-12,22;UBERON:0003894,1.14e-12,22;UBERON:0004161,1.14e-12,22;UBERON:0008836,1.14e-12,22;UBERON:0001723,1.20e-12,1;UBERON:0001033,1.20e-12,1;UBERON:0010056,1.20e-12,1;UBERON:0001374,3.34e-12,1;UBERON:0004252,3.34e-12,1;UBERON:0003663,3.34e-12,1;UBERON:0005090,3.34e-12,1;UBERON:0001630,3.34e-12,1;UBERON:0003661,3.34e-12,1;UBERON:0010890,3.34e-12,1;UBERON:0001383,3.34e-12,1;UBERON:0009854,3.97e-12,23;UBERON:0009856,3.97e-12,23;UBERON:0002365,3.55e-11,25;UBERON:0002330,3.55e-11,25;UBERON:0000165,5.87e-07,2;UBERON:0000166,5.87e-07,2;UBERON:0000930,5.87e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,1.07940638327563,5.19821133958135,1.79210754838934,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.292399974850665,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,1.4351793081753,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8949899739955,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p@chr2:52228080..52228089,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:52228080..52228089,- | |||
|description=CAGE_peak_at_chr2:52228080..52228089,- | |||
|id=chr2:52228080..52228089,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.24e-20,5;CL:0000057,2.59e-12,1;CL:0000632,2.59e-12,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005418!8.13e-08!5;UBERON:0002472!8.13e-08!5;UBERON:0008784!8.13e-08!5;UBERON:0006058!8.13e-08!5;UBERON:0004709!8.13e-08!5;UBERON:0005420!8.13e-08!5;UBERON:0006057!8.13e-08!5;UBERON:0000978!8.13e-08!5;UBERON:0002103!8.13e-08!5;UBERON:0000376!8.13e-08!5;UBERON:0000154!8.13e-08!5;UBERON:0005730!8.13e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.14e-12,22;UBERON:0007499,1.14e-12,22;UBERON:0006925,1.14e-12,22;UBERON:0009497,1.14e-12,22;UBERON:0000015,1.14e-12,22;UBERON:0002423,1.14e-12,22;UBERON:0006235,1.14e-12,22;UBERON:0008835,1.14e-12,22;UBERON:0003894,1.14e-12,22;UBERON:0004161,1.14e-12,22;UBERON:0008836,1.14e-12,22;UBERON:0001723,1.20e-12,1;UBERON:0001033,1.20e-12,1;UBERON:0010056,1.20e-12,1;UBERON:0001374,3.34e-12,1;UBERON:0004252,3.34e-12,1;UBERON:0003663,3.34e-12,1;UBERON:0005090,3.34e-12,1;UBERON:0001630,3.34e-12,1;UBERON:0003661,3.34e-12,1;UBERON:0010890,3.34e-12,1;UBERON:0001383,3.34e-12,1;UBERON:0009854,3.97e-12,23;UBERON:0009856,3.97e-12,23;UBERON:0002365,3.55e-11,25;UBERON:0002330,3.55e-11,25;UBERON:0000165,5.87e-07,2;UBERON:0000166,5.87e-07,2;UBERON:0000930,5.87e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,1.07940638327563,5.19821133958135,1.79210754838934,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.292399974850665,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,1.4351793081753,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8949899739955,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr2:52228080..52228089,- | |||
}} |
Latest revision as of 05:56, 5 August 2015
Short description: | p@chr2:52228080..52228089, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:52228080..52228089, - |
Coexpression cluster: | MCL_coexpression_mm9:2191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.24e-20 | 5 |
fibroblast | 2.59e-12 | 1 |
hepatic stellate cell | 2.59e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.14e-12 | 22 |
epithelial sac | 1.14e-12 | 22 |
digestive gland | 1.14e-12 | 22 |
epithelium of foregut-midgut junction | 1.14e-12 | 22 |
anatomical boundary | 1.14e-12 | 22 |
hepatobiliary system | 1.14e-12 | 22 |
foregut-midgut junction | 1.14e-12 | 22 |
hepatic diverticulum | 1.14e-12 | 22 |
liver primordium | 1.14e-12 | 22 |
septum transversum | 1.14e-12 | 22 |
liver bud | 1.14e-12 | 22 |
tongue | 1.20e-12 | 1 |
gustatory system | 1.20e-12 | 1 |
future tongue | 1.20e-12 | 1 |
biceps femoris | 3.34e-12 | 1 |
hindlimb stylopod muscle | 3.34e-12 | 1 |
hindlimb muscle | 3.34e-12 | 1 |
muscle structure | 3.34e-12 | 1 |
muscle organ | 3.34e-12 | 1 |
limb muscle | 3.34e-12 | 1 |
pelvic complex muscle | 3.34e-12 | 1 |
muscle of leg | 3.34e-12 | 1 |
digestive tract diverticulum | 3.97e-12 | 23 |
sac | 3.97e-12 | 23 |
exocrine gland | 3.55e-11 | 25 |
exocrine system | 3.55e-11 | 25 |
mouth | 5.87e-07 | 2 |
oral opening | 5.87e-07 | 2 |
stomodeum | 5.87e-07 | 2 |