FFCP PHASE1:Mm9::chr4:151533683..151533698,+: Difference between revisions
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{{FFCP|EntrezGene=15206|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=25bp_to_ENSMUST00000138991_5end|description=CAGE_peak_1_at_Hes2_5end|id=chr4:151533683..151533698,+|ontology_enrichment_celltype=CL:0000239!2.43e-14!6;CL:0000677!2.43e-14!6;CL:0000212!2.43e-14!6;CL:0000584!2.43e-14!6;CL:0002563!3.45e-12!9;CL:0002251!3.45e-12!9;CL:0000075!3.52e-12!7;CL:0002076!7.08e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,2.88e-10,6;CL:0000677,2.88e-10,6;CL:0000584,2.88e-10,6;CL:0000075,7.09e-09,7;CL:0002563,5.18e-07,9;CL:0002251,5.18e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.31e-27!43;UBERON:0000344!2.18e-24!15;UBERON:0001242!1.59e-20!13;UBERON:0000060!1.59e-20!13;UBERON:0001262!1.59e-20!13;UBERON:0004786!1.59e-20!13;UBERON:0005409!8.55e-20!59;UBERON:0004923!2.42e-16!24;UBERON:0003350!3.45e-12!9;UBERON:0004808!3.45e-12!9;UBERON:0001277!3.45e-12!9;UBERON:0000485!9.00e-10!11;UBERON:0001007!3.18e-08!128;UBERON:0001555!3.18e-08!128;UBERON:0007026!3.18e-08!128;UBERON:0004119!5.34e-08!130;UBERON:0000925!5.34e-08!130;UBERON:0006595!5.34e-08!130;UBERON:0000331!5.63e-08!3;UBERON:0002116!5.63e-08!3;UBERON:0001204!5.63e-08!3;UBERON:0001168!5.63e-08!3;UBERON:0004921!7.81e-07!126;UBERON:0004185!7.81e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.01e-33,31;UBERON:0005409,1.96e-21,47;UBERON:0001242,3.08e-17,13;UBERON:0001262,3.08e-17,13;UBERON:0004786,3.08e-17,13;UBERON:0000344,6.60e-15,15;UBERON:0002108,1.09e-14,4;UBERON:0004923,3.33e-09,24;UBERON:0000331,3.51e-09,3;UBERON:0002116,3.51e-09,3;UBERON:0001204,3.51e-09,3;UBERON:0001168,3.51e-09,3;UBERON:0004921,5.31e-08,114;UBERON:0001007,7.76e-08,116;UBERON:0001555,7.76e-08,116;UBERON:0007026,7.76e-08,116;UBERON:0004119,1.12e-07,118;UBERON:0000925,1.12e-07,118;UBERON:0006595,1.12e-07,118;UBERON:0003350,5.18e-07,9;UBERON:0004808,5.18e-07,9;UBERON:0001277,5.18e-07,9|phase1_expression=0,1.04692622291808,0.454999239389536,8.16653370528441,8.5152274090879,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,0.22940928106717,2.8711598205751,0.430761996159075,0,3.04037471130198,1.51218077855958,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,2.64450566663544,0,0,0.128867461322093,0,0,0,7.59246498471219,0.494096864172033,0.502670417600539,0.198956472041151,0.38992817423824,3.59527763461689,2.37751854862164,3.98282546508734,0,0,0,0,0,0,0.379419222745544,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Hes2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15206 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENSMUST00000138991_5end | |||
|cluster_id=chr4:151533683..151533698,+ | |||
|description=CAGE_peak_1_at_Hes2_5end | |||
|id=chr4:151533683..151533698,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.43e-14!6;CL:0000677!2.43e-14!6;CL:0000212!2.43e-14!6;CL:0000584!2.43e-14!6;CL:0002563!3.45e-12!9;CL:0002251!3.45e-12!9;CL:0000075!3.52e-12!7;CL:0002076!7.08e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.88e-10,6;CL:0000677,2.88e-10,6;CL:0000584,2.88e-10,6;CL:0000075,7.09e-09,7;CL:0002563,5.18e-07,9;CL:0002251,5.18e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.31e-27!43;UBERON:0000344!2.18e-24!15;UBERON:0001242!1.59e-20!13;UBERON:0000060!1.59e-20!13;UBERON:0001262!1.59e-20!13;UBERON:0004786!1.59e-20!13;UBERON:0005409!8.55e-20!59;UBERON:0004923!2.42e-16!24;UBERON:0003350!3.45e-12!9;UBERON:0004808!3.45e-12!9;UBERON:0001277!3.45e-12!9;UBERON:0000485!9.00e-10!11;UBERON:0001007!3.18e-08!128;UBERON:0001555!3.18e-08!128;UBERON:0007026!3.18e-08!128;UBERON:0004119!5.34e-08!130;UBERON:0000925!5.34e-08!130;UBERON:0006595!5.34e-08!130;UBERON:0000331!5.63e-08!3;UBERON:0002116!5.63e-08!3;UBERON:0001204!5.63e-08!3;UBERON:0001168!5.63e-08!3;UBERON:0004921!7.81e-07!126;UBERON:0004185!7.81e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.01e-33,31;UBERON:0005409,1.96e-21,47;UBERON:0001242,3.08e-17,13;UBERON:0001262,3.08e-17,13;UBERON:0004786,3.08e-17,13;UBERON:0000344,6.60e-15,15;UBERON:0002108,1.09e-14,4;UBERON:0004923,3.33e-09,24;UBERON:0000331,3.51e-09,3;UBERON:0002116,3.51e-09,3;UBERON:0001204,3.51e-09,3;UBERON:0001168,3.51e-09,3;UBERON:0004921,5.31e-08,114;UBERON:0001007,7.76e-08,116;UBERON:0001555,7.76e-08,116;UBERON:0007026,7.76e-08,116;UBERON:0004119,1.12e-07,118;UBERON:0000925,1.12e-07,118;UBERON:0006595,1.12e-07,118;UBERON:0003350,5.18e-07,9;UBERON:0004808,5.18e-07,9;UBERON:0001277,5.18e-07,9 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,8.16653370528441,8.5152274090879,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,0.22940928106717,2.8711598205751,0.430761996159075,0,3.04037471130198,1.51218077855958,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,2.64450566663544,0,0,0.128867461322093,0,0,0,7.59246498471219,0.494096864172033,0.502670417600539,0.198956472041151,0.38992817423824,3.59527763461689,2.37751854862164,3.98282546508734,0,0,0,0,0,0,0.379419222745544,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Hes2 | |||
}} |
Revision as of 06:07, 5 August 2015
Short description: | p1@Hes2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hes2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 25bp_to_ENSMUST00000138991_5end |
EntrezGene: | 15206 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.88e-10 | 6 |
gut absorptive cell | 2.88e-10 | 6 |
enterocyte | 2.88e-10 | 6 |
columnar/cuboidal epithelial cell | 7.09e-09 | 7 |
intestinal epithelial cell | 5.18e-07 | 9 |
epithelial cell of alimentary canal | 5.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.01e-33 | 31 |
gastrointestinal system | 1.96e-21 | 47 |
intestinal mucosa | 3.08e-17 | 13 |
wall of intestine | 3.08e-17 | 13 |
gastrointestinal system mucosa | 3.08e-17 | 13 |
mucosa | 6.60e-15 | 15 |
small intestine | 1.09e-14 | 4 |
organ component layer | 3.33e-09 | 24 |
ileal mucosa | 3.51e-09 | 3 |
ileum | 3.51e-09 | 3 |
mucosa of small intestine | 3.51e-09 | 3 |
wall of small intestine | 3.51e-09 | 3 |
subdivision of digestive tract | 5.31e-08 | 114 |
digestive system | 7.76e-08 | 116 |
digestive tract | 7.76e-08 | 116 |
primitive gut | 7.76e-08 | 116 |
endoderm-derived structure | 1.12e-07 | 118 |
endoderm | 1.12e-07 | 118 |
presumptive endoderm | 1.12e-07 | 118 |
epithelium of mucosa | 5.18e-07 | 9 |
gastrointestinal system epithelium | 5.18e-07 | 9 |
intestinal epithelium | 5.18e-07 | 9 |