FFCP PHASE1:Mm9::chr12:85912452..85912495,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=57|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:85912452..85912495,+|id=chr12:85912452..85912495,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!2.24e-18!9;UBERON:0000019!2.24e-18!9;UBERON:0000047!2.24e-18!9;UBERON:0004088!2.24e-18!9;UBERON:0002104!2.24e-18!9;UBERON:0001456!2.24e-18!9;UBERON:0003072!2.24e-18!9;UBERON:0003071!2.24e-18!9;UBERON:0004128!2.24e-18!9;UBERON:0005085!1.12e-14!13;UBERON:0001444!1.24e-14!11;UBERON:0000020!3.14e-13!12;UBERON:0001032!3.14e-13!12;UBERON:0004456!3.14e-13!12;UBERON:0007811!1.83e-09!86;UBERON:0000153!4.35e-08!94;UBERON:0002346!8.10e-07!71;UBERON:0003075!8.10e-07!71;UBERON:0007284!8.10e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.85e-48,9;UBERON:0000019,6.85e-48,9;UBERON:0000047,6.85e-48,9;UBERON:0010312,6.85e-48,9;UBERON:0004088,6.85e-48,9;UBERON:0002104,6.85e-48,9;UBERON:0001456,6.85e-48,9;UBERON:0003072,6.85e-48,9;UBERON:0004128,6.85e-48,9;UBERON:0003071,6.85e-48,9;UBERON:0001444,3.46e-39,11;UBERON:0000020,6.39e-36,12;UBERON:0001032,6.39e-36,12;UBERON:0004456,6.39e-36,12;UBERON:0000033,3.72e-33,13;UBERON:0005085,3.72e-33,13;UBERON:0007811,7.31e-12,36;UBERON:0003056,3.60e-11,49;UBERON:0000153,6.97e-10,43;UBERON:0002346,1.91e-08,64;UBERON:0003075,1.91e-08,64;UBERON:0007284,1.91e-08,64;UBERON:0010371,2.42e-07,73;UBERON:0004121,5.11e-07,95;UBERON:0000924,5.11e-07,95;UBERON:0006601,5.11e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0.883474163806454,0,0,0,0,0,0,0,0.0914876436024097,0,1.11673199600552,0,0,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.420883711772948,2.47228841629137,0.919608417733892,1.26043490863744,2.41127708537144,5.10273743634959,3.97152532883034,3.09215691047105,3.10444044886819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.721172697119813,0.738447635872886,0.302899349844443,0.990688486514998,0.504130925684203,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr12:85912452..85912495,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:85912452..85912495,+ | |||
|description=CAGE_peak_at_chr12:85912452..85912495,+ | |||
|id=chr12:85912452..85912495,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.24e-18!9;UBERON:0000019!2.24e-18!9;UBERON:0000047!2.24e-18!9;UBERON:0004088!2.24e-18!9;UBERON:0002104!2.24e-18!9;UBERON:0001456!2.24e-18!9;UBERON:0003072!2.24e-18!9;UBERON:0003071!2.24e-18!9;UBERON:0004128!2.24e-18!9;UBERON:0005085!1.12e-14!13;UBERON:0001444!1.24e-14!11;UBERON:0000020!3.14e-13!12;UBERON:0001032!3.14e-13!12;UBERON:0004456!3.14e-13!12;UBERON:0007811!1.83e-09!86;UBERON:0000153!4.35e-08!94;UBERON:0002346!8.10e-07!71;UBERON:0003075!8.10e-07!71;UBERON:0007284!8.10e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.85e-48,9;UBERON:0000019,6.85e-48,9;UBERON:0000047,6.85e-48,9;UBERON:0010312,6.85e-48,9;UBERON:0004088,6.85e-48,9;UBERON:0002104,6.85e-48,9;UBERON:0001456,6.85e-48,9;UBERON:0003072,6.85e-48,9;UBERON:0004128,6.85e-48,9;UBERON:0003071,6.85e-48,9;UBERON:0001444,3.46e-39,11;UBERON:0000020,6.39e-36,12;UBERON:0001032,6.39e-36,12;UBERON:0004456,6.39e-36,12;UBERON:0000033,3.72e-33,13;UBERON:0005085,3.72e-33,13;UBERON:0007811,7.31e-12,36;UBERON:0003056,3.60e-11,49;UBERON:0000153,6.97e-10,43;UBERON:0002346,1.91e-08,64;UBERON:0003075,1.91e-08,64;UBERON:0007284,1.91e-08,64;UBERON:0010371,2.42e-07,73;UBERON:0004121,5.11e-07,95;UBERON:0000924,5.11e-07,95;UBERON:0006601,5.11e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0.883474163806454,0,0,0,0,0,0,0,0.0914876436024097,0,1.11673199600552,0,0,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.420883711772948,2.47228841629137,0.919608417733892,1.26043490863744,2.41127708537144,5.10273743634959,3.97152532883034,3.09215691047105,3.10444044886819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.721172697119813,0.738447635872886,0.302899349844443,0.990688486514998,0.504130925684203,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:85912452..85912495,+ | |||
}} |
Latest revision as of 09:34, 5 August 2015
Short description: | p@chr12:85912452..85912495, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:85912452..85912495, + |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 6.85e-48 | 9 |
camera-type eye | 6.85e-48 | 9 |
simple eye | 6.85e-48 | 9 |
immature eye | 6.85e-48 | 9 |
ocular region | 6.85e-48 | 9 |
visual system | 6.85e-48 | 9 |
face | 6.85e-48 | 9 |
optic cup | 6.85e-48 | 9 |
optic vesicle | 6.85e-48 | 9 |
eye primordium | 6.85e-48 | 9 |
subdivision of head | 3.46e-39 | 11 |
sense organ | 6.39e-36 | 12 |
sensory system | 6.39e-36 | 12 |
entire sense organ system | 6.39e-36 | 12 |
head | 3.72e-33 | 13 |
ectodermal placode | 3.72e-33 | 13 |
craniocervical region | 7.31e-12 | 36 |
pre-chordal neural plate | 3.60e-11 | 49 |
anterior region of body | 6.97e-10 | 43 |
neurectoderm | 1.91e-08 | 64 |
neural plate | 1.91e-08 | 64 |
presumptive neural plate | 1.91e-08 | 64 |
ecto-epithelium | 2.42e-07 | 73 |
ectoderm-derived structure | 5.11e-07 | 95 |
ectoderm | 5.11e-07 | 95 |
presumptive ectoderm | 5.11e-07 | 95 |