FFCP PHASE1:Mm9::chr4:40090493..40090535,+: Difference between revisions
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{{FFCP|EntrezGene=11428|HGNC=|MCL_coexpression_id=3474|UniProt=Q8VDC3,P28271|association_with_transcript=195bp_to_ENSMUST00000030112,NM_007386,uc008shd.1_5end|description=CAGE_peak_2_at_Aco1_5end|id=chr4:40090493..40090535,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.21e-12!66;UBERON:0005172!3.52e-11!49;UBERON:0005173!3.52e-11!49;UBERON:0002417!3.52e-11!49;UBERON:0000916!3.52e-11!49;UBERON:0004119!2.72e-10!130;UBERON:0000925!2.72e-10!130;UBERON:0006595!2.72e-10!130;UBERON:0002365!3.33e-10!25;UBERON:0002330!3.33e-10!25;UBERON:0001007!7.08e-10!128;UBERON:0001555!7.08e-10!128;UBERON:0007026!7.08e-10!128;UBERON:0005177!7.68e-10!85;UBERON:0009854!8.96e-10!23;UBERON:0009856!8.96e-10!23;UBERON:0002107!2.14e-09!22;UBERON:0007499!2.14e-09!22;UBERON:0006925!2.14e-09!22;UBERON:0009497!2.14e-09!22;UBERON:0000015!2.14e-09!22;UBERON:0002423!2.14e-09!22;UBERON:0006235!2.14e-09!22;UBERON:0008835!2.14e-09!22;UBERON:0003894!2.14e-09!22;UBERON:0004161!2.14e-09!22;UBERON:0008836!2.14e-09!22;UBERON:0004921!3.68e-09!126;UBERON:0004185!3.68e-09!126;UBERON:0000160!5.15e-09!43;UBERON:0005409!1.09e-08!59;UBERON:0002100!1.12e-07!98;UBERON:0005256!5.80e-07!47;UBERON:0000466!6.05e-07!79;UBERON:0003914!7.24e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.21e-12,66;UBERON:0005177,2.82e-12,79;UBERON:0005172,3.52e-11,49;UBERON:0005173,3.52e-11,49;UBERON:0002417,3.52e-11,49;UBERON:0000916,3.52e-11,49;UBERON:0000160,1.31e-10,31;UBERON:0004119,3.09e-10,118;UBERON:0000925,3.09e-10,118;UBERON:0006595,3.09e-10,118;UBERON:0002365,3.33e-10,25;UBERON:0002330,3.33e-10,25;UBERON:0002100,6.15e-10,90;UBERON:0001007,7.97e-10,116;UBERON:0001555,7.97e-10,116;UBERON:0007026,7.97e-10,116;UBERON:0009854,8.96e-10,23;UBERON:0009856,8.96e-10,23;UBERON:0005409,1.79e-09,47;UBERON:0002107,2.14e-09,22;UBERON:0007499,2.14e-09,22;UBERON:0006925,2.14e-09,22;UBERON:0009497,2.14e-09,22;UBERON:0000015,2.14e-09,22;UBERON:0002423,2.14e-09,22;UBERON:0006235,2.14e-09,22;UBERON:0008835,2.14e-09,22;UBERON:0003894,2.14e-09,22;UBERON:0004161,2.14e-09,22;UBERON:0008836,2.14e-09,22;UBERON:0004921,4.18e-09,114;UBERON:0003104,1.88e-08,61;UBERON:0009142,1.88e-08,61;UBERON:0005256,1.91e-07,45;UBERON:0003914,7.24e-07,47|phase1_expression=10.4096750618116,36.6424178021329,30.4849490390989,56.863271725684,54.0967388342055,13.2624624810393,14.7175963575181,5.93967287831251,8.869689495555,6.78787126333781,5.82141091966717,7.0199499915896,3.42401459862411,5.85716696207283,6.32908547449759,7.08663435864391,11.8925519281785,4.10100814965709,5.62169177783529,5.94145512517242,28.9997619415148,4.86525660884338,5.48519557191764,39.5181284299714,37.6231220950159,39.0477735598214,33.1686737042488,34.2599259970564,70.6887120377711,34.7801579068704,19.5122849376668,7.62036808151557,3.69038872550742,0,22.8192779603507,19.4494535069436,21.8461211200735,5.4409111995798,6.2506827561904,2.09409497589519,3.52938892818609,2.04913645487534,5.34061388334269,15.6112054289716,14.0913934395125,13.9495531642878,9.38869613217647,16.5699118849139,11.8630538676615,13.9989527333484,17.0783434382942,15.8127820801469,3.85899993932794,5.07753499407941,7.05796978199174,19.551717138732,14.0401385569991,13.4074743992135,3.03474691289397,4.7609188134483,10.1413024560989,13.2149367506962,6.22506357277798,7.19919773825119,2.96659908770092,7.104801149461,3.59520132622086,4.61061966385865,5.18448061542388,7.02030879324791,3.57552434297349,8.56952953211411,8.61387309711293,4.28717797252339,6.70918297127655,3.67687514644008,3.30347642998166,5.61824287574826,6.29786786350598,2.63772575460388,5.21479568533735,5.73004707612436,5.30447698102624,4.50210088025344,6.57032465440283,5.00868595305235,7.54569908235246,3.91438836233131,15.8267744066355,16.550171663386,25.5080750057476,64.531790773604,61.1974200336975,100.924496836272,115.660202305685,115.590936871113,49.4364358863767,21.1333599996792,19.4839503452152,14.8402621294343,10.4224130634744,20.5322363862909,15.2883143823987,0,13.6389355837065,14.1881524666055,15.1657333504435,70.6798215460981,14.7594593678888,19.7428044956217,11.6235168933311,26.1840311348441,20.9860102503013,24.1156224884196,28.4564671268406,39.4593096775181,11.8653584512499,66.5157041831594,5.30766331169925,11.3236794963186,7.72945314611377,11.1521308221101,29.8226817948995,7.61230072230023,5.86450779077674,55.1787239250557,4.55297473122497,3.59941638596045,4.44745794755726,6.74057877321702,4.57500602818627,4.39790232395025,3.30266208365325,2.81287003063364,6.64921742590592,7.30085683804909,21.0807483170155,22.1444407685966,61.9170758162503,51.1373709804132,9.75903322220278,6.89706313300419,7.74267158163002,10.8507468841715,9.18492738542926,9.35230158079403,8.33945348581587,29.4921842642478,9.48499168904506,9.45530400839096,8.44565395986955,10.9597866213787,11.3999372182495,9.4028084960985,14.404749548556,9.55364480728767,8.42655824775882,5.1469581422943,2.55747149456033,8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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11428 | |||
|HGNC= | |||
|MCL_coexpression_id=3474 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VDC3,uniprot:P28271 | |||
|association_with_transcript=195bp_to_ENSMUST00000030112,NM_007386,uc008shd.1_5end | |||
|cluster_id=chr4:40090493..40090535,+ | |||
|description=CAGE_peak_2_at_Aco1_5end | |||
|id=chr4:40090493..40090535,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.21e-12!66;UBERON:0005172!3.52e-11!49;UBERON:0005173!3.52e-11!49;UBERON:0002417!3.52e-11!49;UBERON:0000916!3.52e-11!49;UBERON:0004119!2.72e-10!130;UBERON:0000925!2.72e-10!130;UBERON:0006595!2.72e-10!130;UBERON:0002365!3.33e-10!25;UBERON:0002330!3.33e-10!25;UBERON:0001007!7.08e-10!128;UBERON:0001555!7.08e-10!128;UBERON:0007026!7.08e-10!128;UBERON:0005177!7.68e-10!85;UBERON:0009854!8.96e-10!23;UBERON:0009856!8.96e-10!23;UBERON:0002107!2.14e-09!22;UBERON:0007499!2.14e-09!22;UBERON:0006925!2.14e-09!22;UBERON:0009497!2.14e-09!22;UBERON:0000015!2.14e-09!22;UBERON:0002423!2.14e-09!22;UBERON:0006235!2.14e-09!22;UBERON:0008835!2.14e-09!22;UBERON:0003894!2.14e-09!22;UBERON:0004161!2.14e-09!22;UBERON:0008836!2.14e-09!22;UBERON:0004921!3.68e-09!126;UBERON:0004185!3.68e-09!126;UBERON:0000160!5.15e-09!43;UBERON:0005409!1.09e-08!59;UBERON:0002100!1.12e-07!98;UBERON:0005256!5.80e-07!47;UBERON:0000466!6.05e-07!79;UBERON:0003914!7.24e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.21e-12,66;UBERON:0005177,2.82e-12,79;UBERON:0005172,3.52e-11,49;UBERON:0005173,3.52e-11,49;UBERON:0002417,3.52e-11,49;UBERON:0000916,3.52e-11,49;UBERON:0000160,1.31e-10,31;UBERON:0004119,3.09e-10,118;UBERON:0000925,3.09e-10,118;UBERON:0006595,3.09e-10,118;UBERON:0002365,3.33e-10,25;UBERON:0002330,3.33e-10,25;UBERON:0002100,6.15e-10,90;UBERON:0001007,7.97e-10,116;UBERON:0001555,7.97e-10,116;UBERON:0007026,7.97e-10,116;UBERON:0009854,8.96e-10,23;UBERON:0009856,8.96e-10,23;UBERON:0005409,1.79e-09,47;UBERON:0002107,2.14e-09,22;UBERON:0007499,2.14e-09,22;UBERON:0006925,2.14e-09,22;UBERON:0009497,2.14e-09,22;UBERON:0000015,2.14e-09,22;UBERON:0002423,2.14e-09,22;UBERON:0006235,2.14e-09,22;UBERON:0008835,2.14e-09,22;UBERON:0003894,2.14e-09,22;UBERON:0004161,2.14e-09,22;UBERON:0008836,2.14e-09,22;UBERON:0004921,4.18e-09,114;UBERON:0003104,1.88e-08,61;UBERON:0009142,1.88e-08,61;UBERON:0005256,1.91e-07,45;UBERON:0003914,7.24e-07,47 | |||
|phase1_expression=10.4096750618116,36.6424178021329,30.4849490390989,56.863271725684,54.0967388342055,13.2624624810393,14.7175963575181,5.93967287831251,8.869689495555,6.78787126333781,5.82141091966717,7.0199499915896,3.42401459862411,5.85716696207283,6.32908547449759,7.08663435864391,11.8925519281785,4.10100814965709,5.62169177783529,5.94145512517242,28.9997619415148,4.86525660884338,5.48519557191764,39.5181284299714,37.6231220950159,39.0477735598214,33.1686737042488,34.2599259970564,70.6887120377711,34.7801579068704,19.5122849376668,7.62036808151557,3.69038872550742,0,22.8192779603507,19.4494535069436,21.8461211200735,5.4409111995798,6.2506827561904,2.09409497589519,3.52938892818609,2.04913645487534,5.34061388334269,15.6112054289716,14.0913934395125,13.9495531642878,9.38869613217647,16.5699118849139,11.8630538676615,13.9989527333484,17.0783434382942,15.8127820801469,3.85899993932794,5.07753499407941,7.05796978199174,19.551717138732,14.0401385569991,13.4074743992135,3.03474691289397,4.7609188134483,10.1413024560989,13.2149367506962,6.22506357277798,7.19919773825119,2.96659908770092,7.104801149461,3.59520132622086,4.61061966385865,5.18448061542388,7.02030879324791,3.57552434297349,8.56952953211411,8.61387309711293,4.28717797252339,6.70918297127655,3.67687514644008,3.30347642998166,5.61824287574826,6.29786786350598,2.63772575460388,5.21479568533735,5.73004707612436,5.30447698102624,4.50210088025344,6.57032465440283,5.00868595305235,7.54569908235246,3.91438836233131,15.8267744066355,16.550171663386,25.5080750057476,64.531790773604,61.1974200336975,100.924496836272,115.660202305685,115.590936871113,49.4364358863767,21.1333599996792,19.4839503452152,14.8402621294343,10.4224130634744,20.5322363862909,15.2883143823987,0,13.6389355837065,14.1881524666055,15.1657333504435,70.6798215460981,14.7594593678888,19.7428044956217,11.6235168933311,26.1840311348441,20.9860102503013,24.1156224884196,28.4564671268406,39.4593096775181,11.8653584512499,66.5157041831594,5.30766331169925,11.3236794963186,7.72945314611377,11.1521308221101,29.8226817948995,7.61230072230023,5.86450779077674,55.1787239250557,4.55297473122497,3.59941638596045,4.44745794755726,6.74057877321702,4.57500602818627,4.39790232395025,3.30266208365325,2.81287003063364,6.64921742590592,7.30085683804909,21.0807483170155,22.1444407685966,61.9170758162503,51.1373709804132,9.75903322220278,6.89706313300419,7.74267158163002,10.8507468841715,9.18492738542926,9.35230158079403,8.33945348581587,29.4921842642478,9.48499168904506,9.45530400839096,8.44565395986955,10.9597866213787,11.3999372182495,9.4028084960985,14.404749548556,9.55364480728767,8.42655824775882,5.1469581422943,2.55747149456033,8.07790512888457,9.61556845922494,9.54328925743379,9.70653415899362,7.67380503814875,12.649903256765,15.3472403535269,10.9992094573844,12.4938916332871,13.3293478429919,19.5359282254123,17.99727571918,19.1521983527185,21.735461413814,13.8232611323183,4.83666881697493,6.27718135513635,86.9001399247389,66.1126416658861,11.3042772783674,15.3276203427889,15.3352278973291,25.2104405779178,23.7944506914011,32.9090333174727,65.9595395546871,45.951008367999,34.1815883968367,36.8069473276129,35.2884997685607,51.2327062932906,63.1123105634107,66.5131852669586,14.9837641752935,14.3953125888258,21.4144697778853,26.0673699642002,27.9291581521381,27.5633772168952,47.3641663060687,107.60779787713,105.03214892588,100.445291432346,135.478850578827,6.67380422864376,11.4004217165658,13.7165888554761,18.6631311677423,29.6647906495473,42.0132655439343,42.8667244801708,63.5570088958139,47.22456306835,70.4464211984037,65.4968067896566,62.7195722960267,78.0468732856575,97.0540007153545,110.962009913574,27.8977317151573,10.6115190591471,16.1335326677606,15.9560380628677,17.6017686216377,16.2481069718561,22.6141458841713,20.8793003207845,28.3743259391144,22.589398344175,18.018388858296,30.4785765371273,27.2842271348115,20.9741134943192,16.5870412333199,15.2293591469239,57.0446556702082,45.2536263939761,8.34863067936518,7.97039468826982,10.0000316679772,14.3908428506493,9.78075480190396,7.02789739733949,9.47862950024315,10.2756583119597,6.68396022247182,9.34152551603147,12.5491317519217,10.5212108848072,10.6727700045561,4.17717711348349,28.9557773824868,17.0942979520565,14.6598263418218,21.7760562323747,18.5843193675948,12.867373716214,14.511530734308,15.2770114602277,17.7181135728464,11.9899707698132,19.1236936944484,10.1789444253702,11.7644134866958,14.5376908650475,16.8669773719998,20.6271086496374,4.76615448055303,8.8229936075342,8.92574918101006,9.43082954139006,7.80297028026004,7.31312152168489,12.3411765451591,11.5696680663548,22.2938122660525,21.183207086382,10.3648347085832,16.818397800031,20.8289110437718,23.6426665718371,16.4733834724328,14.4443991775654,62.0854182021582,9.6421157045465,8.54354403989263,14.859854493352,10.7412825874433,8.09984365120171,9.02181902958766,6.86334519619568,4.41943917984024,6.29781535456461,4.83699908315483,21.9574242143476,13.91878371757,19.1120299099238,19.76497737038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| |||
|short_description=p2@Aco1 | |||
}} |
Revision as of 10:18, 5 August 2015
Short description: | p2@Aco1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aco1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3474 |
Association with transcript: | 195bp_to_ENSMUST00000030112, NM_007386, uc008shd.1_5end |
EntrezGene: | 11428 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 1.21e-12 | 66 |
trunk region element | 2.82e-12 | 79 |
abdomen element | 3.52e-11 | 49 |
abdominal segment element | 3.52e-11 | 49 |
abdominal segment of trunk | 3.52e-11 | 49 |
abdomen | 3.52e-11 | 49 |
intestine | 1.31e-10 | 31 |
endoderm-derived structure | 3.09e-10 | 118 |
endoderm | 3.09e-10 | 118 |
presumptive endoderm | 3.09e-10 | 118 |
exocrine gland | 3.33e-10 | 25 |
exocrine system | 3.33e-10 | 25 |
trunk | 6.15e-10 | 90 |
digestive system | 7.97e-10 | 116 |
digestive tract | 7.97e-10 | 116 |
primitive gut | 7.97e-10 | 116 |
digestive tract diverticulum | 8.96e-10 | 23 |
sac | 8.96e-10 | 23 |
gastrointestinal system | 1.79e-09 | 47 |
liver | 2.14e-09 | 22 |
epithelial sac | 2.14e-09 | 22 |
digestive gland | 2.14e-09 | 22 |
epithelium of foregut-midgut junction | 2.14e-09 | 22 |
anatomical boundary | 2.14e-09 | 22 |
hepatobiliary system | 2.14e-09 | 22 |
foregut-midgut junction | 2.14e-09 | 22 |
hepatic diverticulum | 2.14e-09 | 22 |
liver primordium | 2.14e-09 | 22 |
septum transversum | 2.14e-09 | 22 |
liver bud | 2.14e-09 | 22 |
subdivision of digestive tract | 4.18e-09 | 114 |
mesenchyme | 1.88e-08 | 61 |
entire embryonic mesenchyme | 1.88e-08 | 61 |
trunk mesenchyme | 1.91e-07 | 45 |
epithelial tube | 7.24e-07 | 47 |