Personal tools

FFCP PHASE1:Mm9::chr2:72228776..72228796,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=35|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:72228776..72228796,+|id=chr2:72228776..72228796,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.28e-12!18;UBERON:0000948!5.28e-12!18;UBERON:0005498!5.28e-12!18;UBERON:0004140!5.28e-12!18;UBERON:0009881!5.28e-12!18;UBERON:0004141!5.28e-12!18;UBERON:0003084!5.28e-12!18;UBERON:0007005!5.28e-12!18;UBERON:0004139!5.28e-12!18;UBERON:0004291!5.28e-12!18;UBERON:0004535!2.65e-09!23;UBERON:0001009!2.65e-09!23;UBERON:0005418!8.49e-07!5;UBERON:0002472!8.49e-07!5;UBERON:0008784!8.49e-07!5;UBERON:0006058!8.49e-07!5;UBERON:0004709!8.49e-07!5;UBERON:0005420!8.49e-07!5;UBERON:0006057!8.49e-07!5;UBERON:0000978!8.49e-07!5;UBERON:0002103!8.49e-07!5;UBERON:0000376!8.49e-07!5;UBERON:0000154!8.49e-07!5;UBERON:0005730!8.49e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.18e-11,18;UBERON:0000948,2.18e-11,18;UBERON:0005498,2.18e-11,18;UBERON:0004140,2.18e-11,18;UBERON:0009881,2.18e-11,18;UBERON:0004141,2.18e-11,18;UBERON:0003084,2.18e-11,18;UBERON:0007005,2.18e-11,18;UBERON:0004139,2.18e-11,18;UBERON:0004291,2.18e-11,18;UBERON:0005418,4.30e-11,5;UBERON:0002472,4.30e-11,5;UBERON:0008784,4.30e-11,5;UBERON:0006058,4.30e-11,5;UBERON:0004709,4.30e-11,5;UBERON:0002529,4.30e-11,5;UBERON:0010538,4.30e-11,5;UBERON:0005420,4.30e-11,5;UBERON:0010758,4.30e-11,5;UBERON:0000978,4.30e-11,5;UBERON:0002103,4.30e-11,5;UBERON:0000376,4.30e-11,5;UBERON:0000154,4.30e-11,5;UBERON:0010709,4.30e-11,5;UBERON:0005730,4.30e-11,5;UBERON:0000981,4.68e-09,4;UBERON:0003608,4.68e-09,4;UBERON:0003826,4.68e-09,4;UBERON:0008202,4.68e-09,4;UBERON:0004381,4.68e-09,4;UBERON:0007273,4.68e-09,4;UBERON:0010912,4.68e-09,4;UBERON:0002513,4.68e-09,4;UBERON:0004375,4.68e-09,4;UBERON:0010740,4.68e-09,4;UBERON:0010363,4.68e-09,4;UBERON:0003860,4.68e-09,4;UBERON:0002428,4.68e-09,4;UBERON:0010742,4.68e-09,4;UBERON:0002495,4.68e-09,4;UBERON:0003464,4.68e-09,4;UBERON:0003606,4.68e-09,4;UBERON:0005893,4.68e-09,4;UBERON:0009749,4.68e-09,4;UBERON:0010712,4.68e-09,4;UBERON:0010886,4.68e-09,4;UBERON:0005254,4.68e-09,4;UBERON:0010885,4.68e-09,4;UBERON:0010881,4.68e-09,4;UBERON:0010882,4.68e-09,4;UBERON:0007844,4.68e-09,4;UBERON:0001441,4.68e-09,4;UBERON:0011249,4.68e-09,4;UBERON:0002091,4.68e-09,4;UBERON:0003285,4.68e-09,4;UBERON:0004288,4.68e-09,4;UBERON:0010129,4.68e-09,4;UBERON:0006234,4.68e-09,4;UBERON:0004535,2.33e-08,23;UBERON:0001009,2.33e-08,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19644354487482,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.23517741427141,0,0,0.433798070759735,6.19227386364912,7.92657564742305,8.83366073841574,6.78825354389311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23932547098167,0,1.68353484709179,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.281105173679186,2.06962696591213,0,0,0,0,0.278047249225598,0,0,0,0,0,0,1.24275463521301,0.703578179943289,0.180062061461015,0.710234206755631,0.787056926989615,1.69693824176116,2.09280550275367,2.41446061259657,3.26942958628075,2.13927804887525,6.07419617092652,10.2957388123237,11.4035990191759,14.2707574939183,10.1996878257883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0.390267295715598,0.472905432318573,0,0,0.163863314715738,0.345369963731791,0,0,0,0.491764273019036,0,0,0,0,40.647819279904,0,0,0,0,0,0,0,0,0,0,0,0,0.651547837414304,0,1.32745138339963,0.242780636154981,0,0,0,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45192882941996,1.77610869365496,0.784068024066026,0.596861720015682,0.492422699235184,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,4.32045009386798,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,28.1145675682862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,1.10306105070008,0.888986911206461,1.23621034343337,2.88827288632634,0.505394423527595,2.28131369901216,2.45214243801899,0.936415074698824,1.28050304809739,1.32101578597911,0.476293691283074,1.73826488917283,0.964546102318525,2.47251540481984,1.17759136107518,1.37147700954166,1.59728225543404,0.476872379894642,1.0174249164263,1.31753132581463,0.676916863133412,1.09756783723664,0.789209134313529,1.49384525230448,1.68342681497322,0.949080144993393,1.37906275325789,1.63692417267876,0.154936841185966,0.578719832943424,0.249810577937946,1.40358965067245,3.86767897286937,3.06061331310149,6.39715115446595,11.5933917810211|short_description=p@chr2:72228776..72228796,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=35
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr2:72228776..72228796,+
|description=CAGE_peak_at_chr2:72228776..72228796,+
|id=chr2:72228776..72228796,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!5.28e-12!18;UBERON:0000948!5.28e-12!18;UBERON:0005498!5.28e-12!18;UBERON:0004140!5.28e-12!18;UBERON:0009881!5.28e-12!18;UBERON:0004141!5.28e-12!18;UBERON:0003084!5.28e-12!18;UBERON:0007005!5.28e-12!18;UBERON:0004139!5.28e-12!18;UBERON:0004291!5.28e-12!18;UBERON:0004535!2.65e-09!23;UBERON:0001009!2.65e-09!23;UBERON:0005418!8.49e-07!5;UBERON:0002472!8.49e-07!5;UBERON:0008784!8.49e-07!5;UBERON:0006058!8.49e-07!5;UBERON:0004709!8.49e-07!5;UBERON:0005420!8.49e-07!5;UBERON:0006057!8.49e-07!5;UBERON:0000978!8.49e-07!5;UBERON:0002103!8.49e-07!5;UBERON:0000376!8.49e-07!5;UBERON:0000154!8.49e-07!5;UBERON:0005730!8.49e-07!5
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.18e-11,18;UBERON:0000948,2.18e-11,18;UBERON:0005498,2.18e-11,18;UBERON:0004140,2.18e-11,18;UBERON:0009881,2.18e-11,18;UBERON:0004141,2.18e-11,18;UBERON:0003084,2.18e-11,18;UBERON:0007005,2.18e-11,18;UBERON:0004139,2.18e-11,18;UBERON:0004291,2.18e-11,18;UBERON:0005418,4.30e-11,5;UBERON:0002472,4.30e-11,5;UBERON:0008784,4.30e-11,5;UBERON:0006058,4.30e-11,5;UBERON:0004709,4.30e-11,5;UBERON:0002529,4.30e-11,5;UBERON:0010538,4.30e-11,5;UBERON:0005420,4.30e-11,5;UBERON:0010758,4.30e-11,5;UBERON:0000978,4.30e-11,5;UBERON:0002103,4.30e-11,5;UBERON:0000376,4.30e-11,5;UBERON:0000154,4.30e-11,5;UBERON:0010709,4.30e-11,5;UBERON:0005730,4.30e-11,5;UBERON:0000981,4.68e-09,4;UBERON:0003608,4.68e-09,4;UBERON:0003826,4.68e-09,4;UBERON:0008202,4.68e-09,4;UBERON:0004381,4.68e-09,4;UBERON:0007273,4.68e-09,4;UBERON:0010912,4.68e-09,4;UBERON:0002513,4.68e-09,4;UBERON:0004375,4.68e-09,4;UBERON:0010740,4.68e-09,4;UBERON:0010363,4.68e-09,4;UBERON:0003860,4.68e-09,4;UBERON:0002428,4.68e-09,4;UBERON:0010742,4.68e-09,4;UBERON:0002495,4.68e-09,4;UBERON:0003464,4.68e-09,4;UBERON:0003606,4.68e-09,4;UBERON:0005893,4.68e-09,4;UBERON:0009749,4.68e-09,4;UBERON:0010712,4.68e-09,4;UBERON:0010886,4.68e-09,4;UBERON:0005254,4.68e-09,4;UBERON:0010885,4.68e-09,4;UBERON:0010881,4.68e-09,4;UBERON:0010882,4.68e-09,4;UBERON:0007844,4.68e-09,4;UBERON:0001441,4.68e-09,4;UBERON:0011249,4.68e-09,4;UBERON:0002091,4.68e-09,4;UBERON:0003285,4.68e-09,4;UBERON:0004288,4.68e-09,4;UBERON:0010129,4.68e-09,4;UBERON:0006234,4.68e-09,4;UBERON:0004535,2.33e-08,23;UBERON:0001009,2.33e-08,23
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19644354487482,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.23517741427141,0,0,0.433798070759735,6.19227386364912,7.92657564742305,8.83366073841574,6.78825354389311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23932547098167,0,1.68353484709179,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.281105173679186,2.06962696591213,0,0,0,0,0.278047249225598,0,0,0,0,0,0,1.24275463521301,0.703578179943289,0.180062061461015,0.710234206755631,0.787056926989615,1.69693824176116,2.09280550275367,2.41446061259657,3.26942958628075,2.13927804887525,6.07419617092652,10.2957388123237,11.4035990191759,14.2707574939183,10.1996878257883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0.390267295715598,0.472905432318573,0,0,0.163863314715738,0.345369963731791,0,0,0,0.491764273019036,0,0,0,0,40.647819279904,0,0,0,0,0,0,0,0,0,0,0,0,0.651547837414304,0,1.32745138339963,0.242780636154981,0,0,0,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45192882941996,1.77610869365496,0.784068024066026,0.596861720015682,0.492422699235184,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,4.32045009386798,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,28.1145675682862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,1.10306105070008,0.888986911206461,1.23621034343337,2.88827288632634,0.505394423527595,2.28131369901216,2.45214243801899,0.936415074698824,1.28050304809739,1.32101578597911,0.476293691283074,1.73826488917283,0.964546102318525,2.47251540481984,1.17759136107518,1.37147700954166,1.59728225543404,0.476872379894642,1.0174249164263,1.31753132581463,0.676916863133412,1.09756783723664,0.789209134313529,1.49384525230448,1.68342681497322,0.949080144993393,1.37906275325789,1.63692417267876,0.154936841185966,0.578719832943424,0.249810577937946,1.40358965067245,3.86767897286937,3.06061331310149,6.39715115446595,11.5933917810211
|short_description=p@chr2:72228776..72228796,+
}}

Latest revision as of 10:28, 5 August 2015

Short description:p@chr2:72228776..72228796, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr2:72228776..72228796, +
Coexpression cluster:MCL_coexpression_mm9:35
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
10
20
30
40
50




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data