Personal tools

FFCP PHASE1:Mm9::chr1:184495125..184495141,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=170725|HGNC=|MCL_coexpression_id=110|UniProt=Q91VA3|association_with_transcript=0bp_to_ENSMUST00000048941,ENSMUST00000168514,NM_001145806,NM_130890,uc007dyh.2,uc007dyi.2,uc011wxv.1_5end|description=CAGE_peak_1_at_Capn8_5end|id=chr1:184495125..184495141,+|ontology_enrichment_celltype=CL:0002563!9.00e-08!9;CL:0002251!9.00e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,8.58e-10,9;CL:0002251,8.58e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.17e-22!59;UBERON:0000160!4.81e-18!43;UBERON:0000344!6.99e-13!15;UBERON:0004119!1.04e-11!130;UBERON:0000925!1.04e-11!130;UBERON:0006595!1.04e-11!130;UBERON:0001242!2.64e-11!13;UBERON:0000060!2.64e-11!13;UBERON:0001262!2.64e-11!13;UBERON:0004786!2.64e-11!13;UBERON:0001007!7.13e-11!128;UBERON:0001555!7.13e-11!128;UBERON:0007026!7.13e-11!128;UBERON:0004923!2.79e-10!24;UBERON:0004921!7.48e-10!126;UBERON:0004185!7.48e-10!126;UBERON:0003350!9.00e-08!9;UBERON:0004808!9.00e-08!9;UBERON:0001277!9.00e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.64e-39,47;UBERON:0000160,4.98e-36,31;UBERON:0000344,3.94e-18,15;UBERON:0001242,1.57e-15,13;UBERON:0001262,1.57e-15,13;UBERON:0004786,1.57e-15,13;UBERON:0004119,4.54e-15,118;UBERON:0000925,4.54e-15,118;UBERON:0006595,4.54e-15,118;UBERON:0001007,1.56e-14,116;UBERON:0001555,1.56e-14,116;UBERON:0007026,1.56e-14,116;UBERON:0004923,3.64e-13,24;UBERON:0004921,5.96e-13,114;UBERON:0003350,8.58e-10,9;UBERON:0004808,8.58e-10,9;UBERON:0001277,8.58e-10,9;UBERON:0000014,1.43e-09,5;UBERON:0001003,1.43e-09,5;UBERON:0002097,1.43e-09,5;UBERON:0002199,1.43e-09,5;UBERON:0007029,1.43e-09,5;UBERON:0007376,1.43e-09,5;UBERON:0002416,1.43e-09,5;UBERON:0007383,1.43e-09,5;UBERON:0000485,9.45e-08,11;UBERON:0002108,2.42e-07,4|phase1_expression=0,0.348975407639361,2.27499619694768,1.20985684522732,1.50268718983904,23.3352187957527,21.7259755753839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,5.73523202667925,1.14846392823004,6.03066794622705,5.60225204983311,7.41091335879858,6.80481350351813,7.09537634096975,0,0,0,4.33277429626912,1.32987716286794,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0.125666591329675,1.48316980640624,0,0,0,0,0,24.2309289583559,0,0,8.9409969323007,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,18.8338706300765,5.02456076660734,0.213288250535234,0.928946687441754,2.31961430379768,2.01683524623343,3.33567065767305,4.1849637744763,9.49058123089023,4.94096864172033,9.29940272560997,9.94782360205754,8.77338392036041,8.98819408654222,11.2391785934841,14.9355954940775,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,2.1183207086382,1.98475558249466,17.4779428117969,5.00539722757307,18.0335645535186,61.5961295056184,89.9492130602936,11.0762717919343,0,0,0,0.185194527369712,0,0,0,0,0,0,122.197839105935,0,0.609958401380546,2.05210147561422,5.22720740036172,10.9181281873089,20.6342449968776,28.2674818580649,102.60832925774,3.75883422546199,0,0,0,0.330916980914195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0.100826185136841,0,0,0.116876902181569,2.26730383615211,0,0,0,0,0,0.183151624267265,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,0,0.188626341386076,0,0.448176066834085,0.229741875822453,0,0.231768651889711,0,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0,0.355905054372522,0,0,0.77468420592983,0.192906610981141,0.249810577937946,1.40358965067245,2.14871054048298,0.191288332068843,5.29419405886837,0.463735671240843|short_description=p1@Capn8}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:170725
|HGNC=
|MCL_coexpression_id=110
|TSSclassifier=NA
|UniProt=uniprot:Q91VA3
|association_with_transcript=0bp_to_ENSMUST00000048941,ENSMUST00000168514,NM_001145806,NM_130890,uc007dyh.2,uc007dyi.2,uc011wxv.1_5end
|cluster_id=chr1:184495125..184495141,+
|description=CAGE_peak_1_at_Capn8_5end
|id=chr1:184495125..184495141,+
|ontology_enrichment_celltype=CL:0002563!9.00e-08!9;CL:0002251!9.00e-08!9
|ontology_enrichment_celltype_v019_2=CL:0002563,8.58e-10,9;CL:0002251,8.58e-10,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!5.17e-22!59;UBERON:0000160!4.81e-18!43;UBERON:0000344!6.99e-13!15;UBERON:0004119!1.04e-11!130;UBERON:0000925!1.04e-11!130;UBERON:0006595!1.04e-11!130;UBERON:0001242!2.64e-11!13;UBERON:0000060!2.64e-11!13;UBERON:0001262!2.64e-11!13;UBERON:0004786!2.64e-11!13;UBERON:0001007!7.13e-11!128;UBERON:0001555!7.13e-11!128;UBERON:0007026!7.13e-11!128;UBERON:0004923!2.79e-10!24;UBERON:0004921!7.48e-10!126;UBERON:0004185!7.48e-10!126;UBERON:0003350!9.00e-08!9;UBERON:0004808!9.00e-08!9;UBERON:0001277!9.00e-08!9
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.64e-39,47;UBERON:0000160,4.98e-36,31;UBERON:0000344,3.94e-18,15;UBERON:0001242,1.57e-15,13;UBERON:0001262,1.57e-15,13;UBERON:0004786,1.57e-15,13;UBERON:0004119,4.54e-15,118;UBERON:0000925,4.54e-15,118;UBERON:0006595,4.54e-15,118;UBERON:0001007,1.56e-14,116;UBERON:0001555,1.56e-14,116;UBERON:0007026,1.56e-14,116;UBERON:0004923,3.64e-13,24;UBERON:0004921,5.96e-13,114;UBERON:0003350,8.58e-10,9;UBERON:0004808,8.58e-10,9;UBERON:0001277,8.58e-10,9;UBERON:0000014,1.43e-09,5;UBERON:0001003,1.43e-09,5;UBERON:0002097,1.43e-09,5;UBERON:0002199,1.43e-09,5;UBERON:0007029,1.43e-09,5;UBERON:0007376,1.43e-09,5;UBERON:0002416,1.43e-09,5;UBERON:0007383,1.43e-09,5;UBERON:0000485,9.45e-08,11;UBERON:0002108,2.42e-07,4
|phase1_expression=0,0.348975407639361,2.27499619694768,1.20985684522732,1.50268718983904,23.3352187957527,21.7259755753839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,5.73523202667925,1.14846392823004,6.03066794622705,5.60225204983311,7.41091335879858,6.80481350351813,7.09537634096975,0,0,0,4.33277429626912,1.32987716286794,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0.125666591329675,1.48316980640624,0,0,0,0,0,24.2309289583559,0,0,8.9409969323007,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,18.8338706300765,5.02456076660734,0.213288250535234,0.928946687441754,2.31961430379768,2.01683524623343,3.33567065767305,4.1849637744763,9.49058123089023,4.94096864172033,9.29940272560997,9.94782360205754,8.77338392036041,8.98819408654222,11.2391785934841,14.9355954940775,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,2.1183207086382,1.98475558249466,17.4779428117969,5.00539722757307,18.0335645535186,61.5961295056184,89.9492130602936,11.0762717919343,0,0,0,0.185194527369712,0,0,0,0,0,0,122.197839105935,0,0.609958401380546,2.05210147561422,5.22720740036172,10.9181281873089,20.6342449968776,28.2674818580649,102.60832925774,3.75883422546199,0,0,0,0.330916980914195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0.100826185136841,0,0,0.116876902181569,2.26730383615211,0,0,0,0,0,0.183151624267265,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,0,0.188626341386076,0,0.448176066834085,0.229741875822453,0,0.231768651889711,0,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0,0.355905054372522,0,0,0.77468420592983,0.192906610981141,0.249810577937946,1.40358965067245,2.14871054048298,0.191288332068843,5.29419405886837,0.463735671240843
|short_description=p1@Capn8
}}

Revision as of 10:40, 5 August 2015

Short description:p1@Capn8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Capn8_5end
Coexpression cluster:MCL_coexpression_mm9:110
Association with transcript: 0bp_to_ENSMUST00000048941, ENSMUST00000168514, NM_001145806, NM_130890, uc007dyh.2, uc007dyi.2, uc011wxv.1_5end
EntrezGene:170725
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
25
50
75
100
125




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data