FFCP PHASE1:Mm9::chr4:45839674..45839685,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=75426|HGNC=|MCL_coexpression_id=1065|UniProt=Q80W15|association_with_transcript=13bp_to_NM_018741,uc008ssy.1_5end|description=CAGE_peak_2_at_Igfbpl1_5end|id=chr4:45839674..45839685,-|ontology_enrichment_celltype=CL:0000221!3.09e-14!44;CL:0000133!3.09e-14!44;CL:0002319!7.81e-14!43;CL:0000055!4.14e-10!50;CL:0000540!4.33e-10!33;CL:0000047!4.33e-10!33;CL:0000031!4.33e-10!33;CL:0000404!4.33e-10!33;CL:0000117!1.04e-08!23;CL:0000337!1.04e-08!23;CL:0000393!3.75e-07!39;CL:0000211!3.75e-07!39;CL:0002609!5.88e-07!6|ontology_enrichment_celltype_v019_2=CL:0000221,1.09e-15,44;CL:0000133,1.09e-15,44;CL:0002319,4.03e-15,43;CL:0000540,4.60e-10,33;CL:0000047,4.60e-10,33;CL:0000031,4.60e-10,33;CL:0000404,4.60e-10,33;CL:0000117,9.71e-10,23;CL:0000337,9.71e-10,23;CL:0002609,1.02e-09,6;CL:0002453,2.00e-08,8;CL:0000393,1.12e-07,39;CL:0000211,1.12e-07,39;CL:0002321,6.59e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.19e-11!73;UBERON:0005743!1.19e-11!73;UBERON:0000073!2.23e-11!75;UBERON:0001016!2.23e-11!75;UBERON:0004121!1.04e-10!102;UBERON:0000924!1.04e-10!102;UBERON:0006601!1.04e-10!102;UBERON:0002346!2.15e-08!71;UBERON:0003075!2.15e-08!71;UBERON:0007284!2.15e-08!71;UBERON:0003056!2.18e-08!49;UBERON:0000033!7.34e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.49e-09,95;UBERON:0000924,3.49e-09,95;UBERON:0006601,3.49e-09,95;UBERON:0001017,7.90e-09,73;UBERON:0001016,2.29e-08,75;UBERON:0001954,1.12e-07,7;UBERON:0003022,1.12e-07,7;UBERON:0002421,1.12e-07,7;UBERON:0000349,1.12e-07,7;UBERON:0002600,1.12e-07,7;UBERON:0003056,5.18e-07,49|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,33.3578489262083,29.8773208518882,22.1650084944683,3.91961980551015,30.188038516644,0,0,0,0,0,0,55.839343197249,38.6163414868584,50.7065122804943,0.338844532069132,2.66788438833342,0,0,0,17.3768064100675,46.4904149439081,76.8340027205819,85.5937649022919,76.9789358546058,0.285650984403804,0.662605622854841,58.7955836231779,41.4052434798781,65.2645338493115,0,0.127687338085188,0,35.7411839748825,25.0676143470602,32.2966289745191,0,0,0,1.17851434189467,0.569486723196412,16.0303523409758,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,18.3455354084782,0,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,2.34216797332867,7.58676944630461,4.68161537493908,3.61691562805716,1.29269348387523,0.640568601424249,1.40552586839593,0,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0,2.89976081549703,2.81431271977315,0.720248245844059,0.23674473558521,1.18058539048442,0.771335564436891,0.930135779001631,0.268273401399619,1.5179494507732,1.15191894939436,0.820837320395476,0.162137619091711,0.146199987425332,0.658650345873152,0.402619256281115,0,38.3834204174731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,1.29254038639679,0.238968797952552,1.55959071857676,1.98153571552183,0,1.16902343164525,1.58115111178609,0.963963949265421,0,0.178065603667255,0,0,0,0.485561272309963,0.906970670894253,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,2.88097750450096,2.06973894052407,0.214337035031592,0.177340233642274,0.891844088010353,0.822745103010605,0.304464949114599,0.704015124191131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.108005340821801,0.627264888043406,0,0,0,0,0,0,0,0.448549638131936,0.496375471371293,0.194451188344048,0.387479470433193,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,2.38710899443606,8.77854721482268,9.56108192223151,3.8897074730927,2.72497111416377,1.10306105070008,2.44471400581777,1.85431551515005,0.962757628775446,1.76888048234658,2.5347929989024,1.69763707247469,2.71560371662659,1.47257850531199,2.5845961030026,2.85776214769844,2.54945517078682,3.8581844092741,1.64834360321323,2.35518272215036,3.42869252385415,2.8396128985494,2.14592570952589,2.18019624948493,3.10560955370591,2.70766745253365,2.74391959309159,0.526139422875686,1.90125759384206,0.561142271657738,2.72860541685601,2.26560309463796,2.45538625901814,2.16911577660352,1.92906610981141,6.24526444844865,1.16965804222704,1.07435527024149,0,0,0|short_description=p2@Igfbpl1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:75426 | |||
|HGNC= | |||
|MCL_coexpression_id=1065 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80W15 | |||
|association_with_transcript=13bp_to_NM_018741,uc008ssy.1_5end | |||
|cluster_id=chr4:45839674..45839685,- | |||
|description=CAGE_peak_2_at_Igfbpl1_5end | |||
|id=chr4:45839674..45839685,- | |||
|ontology_enrichment_celltype=CL:0000221!3.09e-14!44;CL:0000133!3.09e-14!44;CL:0002319!7.81e-14!43;CL:0000055!4.14e-10!50;CL:0000540!4.33e-10!33;CL:0000047!4.33e-10!33;CL:0000031!4.33e-10!33;CL:0000404!4.33e-10!33;CL:0000117!1.04e-08!23;CL:0000337!1.04e-08!23;CL:0000393!3.75e-07!39;CL:0000211!3.75e-07!39;CL:0002609!5.88e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.09e-15,44;CL:0000133,1.09e-15,44;CL:0002319,4.03e-15,43;CL:0000540,4.60e-10,33;CL:0000047,4.60e-10,33;CL:0000031,4.60e-10,33;CL:0000404,4.60e-10,33;CL:0000117,9.71e-10,23;CL:0000337,9.71e-10,23;CL:0002609,1.02e-09,6;CL:0002453,2.00e-08,8;CL:0000393,1.12e-07,39;CL:0000211,1.12e-07,39;CL:0002321,6.59e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.19e-11!73;UBERON:0005743!1.19e-11!73;UBERON:0000073!2.23e-11!75;UBERON:0001016!2.23e-11!75;UBERON:0004121!1.04e-10!102;UBERON:0000924!1.04e-10!102;UBERON:0006601!1.04e-10!102;UBERON:0002346!2.15e-08!71;UBERON:0003075!2.15e-08!71;UBERON:0007284!2.15e-08!71;UBERON:0003056!2.18e-08!49;UBERON:0000033!7.34e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.49e-09,95;UBERON:0000924,3.49e-09,95;UBERON:0006601,3.49e-09,95;UBERON:0001017,7.90e-09,73;UBERON:0001016,2.29e-08,75;UBERON:0001954,1.12e-07,7;UBERON:0003022,1.12e-07,7;UBERON:0002421,1.12e-07,7;UBERON:0000349,1.12e-07,7;UBERON:0002600,1.12e-07,7;UBERON:0003056,5.18e-07,49 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,33.3578489262083,29.8773208518882,22.1650084944683,3.91961980551015,30.188038516644,0,0,0,0,0,0,55.839343197249,38.6163414868584,50.7065122804943,0.338844532069132,2.66788438833342,0,0,0,17.3768064100675,46.4904149439081,76.8340027205819,85.5937649022919,76.9789358546058,0.285650984403804,0.662605622854841,58.7955836231779,41.4052434798781,65.2645338493115,0,0.127687338085188,0,35.7411839748825,25.0676143470602,32.2966289745191,0,0,0,1.17851434189467,0.569486723196412,16.0303523409758,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,18.3455354084782,0,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,2.34216797332867,7.58676944630461,4.68161537493908,3.61691562805716,1.29269348387523,0.640568601424249,1.40552586839593,0,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0,2.89976081549703,2.81431271977315,0.720248245844059,0.23674473558521,1.18058539048442,0.771335564436891,0.930135779001631,0.268273401399619,1.5179494507732,1.15191894939436,0.820837320395476,0.162137619091711,0.146199987425332,0.658650345873152,0.402619256281115,0,38.3834204174731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,1.29254038639679,0.238968797952552,1.55959071857676,1.98153571552183,0,1.16902343164525,1.58115111178609,0.963963949265421,0,0.178065603667255,0,0,0,0.485561272309963,0.906970670894253,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,2.88097750450096,2.06973894052407,0.214337035031592,0.177340233642274,0.891844088010353,0.822745103010605,0.304464949114599,0.704015124191131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.108005340821801,0.627264888043406,0,0,0,0,0,0,0,0.448549638131936,0.496375471371293,0.194451188344048,0.387479470433193,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,2.38710899443606,8.77854721482268,9.56108192223151,3.8897074730927,2.72497111416377,1.10306105070008,2.44471400581777,1.85431551515005,0.962757628775446,1.76888048234658,2.5347929989024,1.69763707247469,2.71560371662659,1.47257850531199,2.5845961030026,2.85776214769844,2.54945517078682,3.8581844092741,1.64834360321323,2.35518272215036,3.42869252385415,2.8396128985494,2.14592570952589,2.18019624948493,3.10560955370591,2.70766745253365,2.74391959309159,0.526139422875686,1.90125759384206,0.561142271657738,2.72860541685601,2.26560309463796,2.45538625901814,2.16911577660352,1.92906610981141,6.24526444844865,1.16965804222704,1.07435527024149,0,0,0 | |||
|short_description=p2@Igfbpl1 | |||
}} |
Revision as of 12:44, 5 August 2015
Short description: | p2@Igfbpl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Igfbpl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1065 |
Association with transcript: | 13bp_to_NM_018741, uc008ssy.1_5end |
EntrezGene: | 75426 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.09e-15 | 44 |
neurectodermal cell | 1.09e-15 | 44 |
neural cell | 4.03e-15 | 43 |
neuron | 4.60e-10 | 33 |
neuronal stem cell | 4.60e-10 | 33 |
neuroblast | 4.60e-10 | 33 |
electrically signaling cell | 4.60e-10 | 33 |
CNS neuron (sensu Vertebrata) | 9.71e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.71e-10 | 23 |
neuron of cerebral cortex | 1.02e-09 | 6 |
oligodendrocyte precursor cell | 2.00e-08 | 8 |
electrically responsive cell | 1.12e-07 | 39 |
electrically active cell | 1.12e-07 | 39 |
embryonic cell | 6.59e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.49e-09 | 95 |
ectoderm | 3.49e-09 | 95 |
presumptive ectoderm | 3.49e-09 | 95 |
central nervous system | 7.90e-09 | 73 |
nervous system | 2.29e-08 | 75 |
Ammon's horn | 1.12e-07 | 7 |
lobe parts of cerebral cortex | 1.12e-07 | 7 |
hippocampal formation | 1.12e-07 | 7 |
limbic system | 1.12e-07 | 7 |
limbic lobe | 1.12e-07 | 7 |
pre-chordal neural plate | 5.18e-07 | 49 |