FFCP PHASE1:Mm9::chr9:66888939..66888949,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:66888939..66888949,+|id=chr9:66888939..66888949,+|ontology_enrichment_celltype=CL:0002563!1.97e-34!9;CL:0002251!1.97e-34!9;CL:0000066!1.85e-24!25;CL:0000239!3.76e-23!6;CL:0000677!3.76e-23!6;CL:0000212!3.76e-23!6;CL:0000584!3.76e-23!6;CL:0002076!4.27e-20!15;CL:0000075!8.98e-20!7;CL:0000223!4.14e-18!20;CL:0002250!8.08e-13!3;CL:0000473!1.15e-12!3;CL:0000627!1.15e-12!3;CL:0000682!1.15e-12!3;CL:0000063!4.34e-09!66|ontology_enrichment_celltype_v019_2=CL:0002563,5.47e-56,9;CL:0002251,5.47e-56,9;CL:0000066,6.60e-38,25;CL:0002076,1.67e-33,15;CL:0000239,6.74e-33,6;CL:0000677,6.74e-33,6;CL:0000584,6.74e-33,6;CL:0000075,3.09e-28,7;CL:0000223,4.74e-25,20;CL:0002250,5.39e-25,3;CL:0000682,1.13e-24,3;CL:0000473,5.82e-11,7;CL:0002321,8.73e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.47e-35!15;UBERON:0001242!1.84e-34!13;UBERON:0000060!1.84e-34!13;UBERON:0001262!1.84e-34!13;UBERON:0004786!1.84e-34!13;UBERON:0003350!1.97e-34!9;UBERON:0004808!1.97e-34!9;UBERON:0001277!1.97e-34!9;UBERON:0000485!6.40e-28!11;UBERON:0004923!9.08e-25!24;UBERON:0000160!9.37e-13!43;UBERON:0005409!4.31e-10!59|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.47e-56,9;UBERON:0004808,5.47e-56,9;UBERON:0001277,5.47e-56,9;UBERON:0000485,8.93e-46,11;UBERON:0001242,1.07e-38,13;UBERON:0001262,1.07e-38,13;UBERON:0004786,1.07e-38,13;UBERON:0000344,1.67e-33,15;UBERON:0004923,8.15e-21,24;UBERON:0000160,5.07e-16,31;UBERON:0005409,2.13e-10,47;UBERON:0003929,8.37e-09,55;UBERON:0000490,3.10e-07,66;UBERON:0005911,6.81e-07,69|phase1_expression=0,0.697950815278722,1.36499771816861,1.81478526784098,1.00179145989269,4.36486106970913,2.80335168714631,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.159992422793407,0,3.44539178469012,2.58457197695445,2.80112602491656,0.190023419456374,0,0,0,0,0,6.35473563452804,1.16364251750945,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:66888939..66888949,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:66888939..66888949,+ | |||
|description=CAGE_peak_at_chr9:66888939..66888949,+ | |||
|id=chr9:66888939..66888949,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.97e-34!9;CL:0002251!1.97e-34!9;CL:0000066!1.85e-24!25;CL:0000239!3.76e-23!6;CL:0000677!3.76e-23!6;CL:0000212!3.76e-23!6;CL:0000584!3.76e-23!6;CL:0002076!4.27e-20!15;CL:0000075!8.98e-20!7;CL:0000223!4.14e-18!20;CL:0002250!8.08e-13!3;CL:0000473!1.15e-12!3;CL:0000627!1.15e-12!3;CL:0000682!1.15e-12!3;CL:0000063!4.34e-09!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.47e-56,9;CL:0002251,5.47e-56,9;CL:0000066,6.60e-38,25;CL:0002076,1.67e-33,15;CL:0000239,6.74e-33,6;CL:0000677,6.74e-33,6;CL:0000584,6.74e-33,6;CL:0000075,3.09e-28,7;CL:0000223,4.74e-25,20;CL:0002250,5.39e-25,3;CL:0000682,1.13e-24,3;CL:0000473,5.82e-11,7;CL:0002321,8.73e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.47e-35!15;UBERON:0001242!1.84e-34!13;UBERON:0000060!1.84e-34!13;UBERON:0001262!1.84e-34!13;UBERON:0004786!1.84e-34!13;UBERON:0003350!1.97e-34!9;UBERON:0004808!1.97e-34!9;UBERON:0001277!1.97e-34!9;UBERON:0000485!6.40e-28!11;UBERON:0004923!9.08e-25!24;UBERON:0000160!9.37e-13!43;UBERON:0005409!4.31e-10!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.47e-56,9;UBERON:0004808,5.47e-56,9;UBERON:0001277,5.47e-56,9;UBERON:0000485,8.93e-46,11;UBERON:0001242,1.07e-38,13;UBERON:0001262,1.07e-38,13;UBERON:0004786,1.07e-38,13;UBERON:0000344,1.67e-33,15;UBERON:0004923,8.15e-21,24;UBERON:0000160,5.07e-16,31;UBERON:0005409,2.13e-10,47;UBERON:0003929,8.37e-09,55;UBERON:0000490,3.10e-07,66;UBERON:0005911,6.81e-07,69 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,1.81478526784098,1.00179145989269,4.36486106970913,2.80335168714631,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.159992422793407,0,3.44539178469012,2.58457197695445,2.80112602491656,0.190023419456374,0,0,0,0,0,6.35473563452804,1.16364251750945,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:66888939..66888949,+ | |||
}} |
Latest revision as of 12:54, 5 August 2015
Short description: | p@chr9:66888939..66888949, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:66888939..66888949, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.47e-56 | 9 |
epithelial cell of alimentary canal | 5.47e-56 | 9 |
epithelial cell | 6.60e-38 | 25 |
endo-epithelial cell | 1.67e-33 | 15 |
brush border epithelial cell | 6.74e-33 | 6 |
gut absorptive cell | 6.74e-33 | 6 |
enterocyte | 6.74e-33 | 6 |
columnar/cuboidal epithelial cell | 3.09e-28 | 7 |
endodermal cell | 4.74e-25 | 20 |
intestinal crypt stem cell | 5.39e-25 | 3 |
M cell of gut | 1.13e-24 | 3 |
defensive cell | 5.82e-11 | 7 |
embryonic cell | 8.73e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.47e-56 | 9 |
gastrointestinal system epithelium | 5.47e-56 | 9 |
intestinal epithelium | 5.47e-56 | 9 |
simple columnar epithelium | 8.93e-46 | 11 |
intestinal mucosa | 1.07e-38 | 13 |
wall of intestine | 1.07e-38 | 13 |
gastrointestinal system mucosa | 1.07e-38 | 13 |
mucosa | 1.67e-33 | 15 |
organ component layer | 8.15e-21 | 24 |
intestine | 5.07e-16 | 31 |
gastrointestinal system | 2.13e-10 | 47 |
gut epithelium | 8.37e-09 | 55 |
unilaminar epithelium | 3.10e-07 | 66 |
endo-epithelium | 6.81e-07 | 69 |