Personal tools

FFCP PHASE1:Mm9::chr18:21810578..21810590,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=55|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:21810578..21810590,-|id=chr18:21810578..21810590,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002611,3.06e-10,2;CL:0002612,6.81e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!1.45e-09!7;UBERON:0006858!1.45e-09!7;UBERON:0000489!5.35e-09!21;UBERON:0000991!3.64e-08!18;UBERON:0005564!3.64e-08!18;UBERON:0004176!2.32e-07!17;UBERON:0009196!2.32e-07!17;UBERON:0009117!2.32e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.11e-34,7;UBERON:0006858,4.11e-34,7;UBERON:0003064,1.02e-16,14;UBERON:0001948,7.64e-15,5;UBERON:0002315,7.64e-15,5;UBERON:0002240,2.08e-12,6;UBERON:0005174,2.08e-12,6;UBERON:0001137,2.08e-12,6;UBERON:0002256,3.06e-10,2;UBERON:0000489,2.04e-07,21;UBERON:0002257,6.81e-07,3;UBERON:0005172,8.03e-07,49;UBERON:0005173,8.03e-07,49;UBERON:0002417,8.03e-07,49;UBERON:0000916,8.03e-07,49|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,1.41957974411207,1.37114433605739,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.32521124570968,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0,0,1.17851434189467,1.28134512719193,0.745597783301202,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,1.97180787687353,0,0,0,0,0,0,0,0.517875767294343,5.34391700633369,1.73485326766136,6.08930956624282,5.07354093963329,4.52167921657868,4.23319345688537,3.64433114856059,0,0,0.884610551949874,0.161766849947409,0.883366073841574,0.484875253135222,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0.255715457330331,0.41557608911912,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0,0,0,0,0,0,0,0,0.205782136407943,0.796137067273973,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0,2.25415471346161,1.01825663922657,0.581857461502877,0.350679099451593,0.316182685621286,0.442830443938806,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0.370389054739423,0,0.546776910884101,0.915112692826091,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,1.12738587736838,1.19613236835183,0.330916980914195,0.777804753376191,1.03327858782185,0.506868376472335,0.469428954583016,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.436039249896986,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0.429742108096597,0,0,0|short_description=p@chr18:21810578..21810590,-}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=55
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr18:21810578..21810590,-
|description=CAGE_peak_at_chr18:21810578..21810590,-
|id=chr18:21810578..21810590,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002611,3.06e-10,2;CL:0002612,6.81e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002369!1.45e-09!7;UBERON:0006858!1.45e-09!7;UBERON:0000489!5.35e-09!21;UBERON:0000991!3.64e-08!18;UBERON:0005564!3.64e-08!18;UBERON:0004176!2.32e-07!17;UBERON:0009196!2.32e-07!17;UBERON:0009117!2.32e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.11e-34,7;UBERON:0006858,4.11e-34,7;UBERON:0003064,1.02e-16,14;UBERON:0001948,7.64e-15,5;UBERON:0002315,7.64e-15,5;UBERON:0002240,2.08e-12,6;UBERON:0005174,2.08e-12,6;UBERON:0001137,2.08e-12,6;UBERON:0002256,3.06e-10,2;UBERON:0000489,2.04e-07,21;UBERON:0002257,6.81e-07,3;UBERON:0005172,8.03e-07,49;UBERON:0005173,8.03e-07,49;UBERON:0002417,8.03e-07,49;UBERON:0000916,8.03e-07,49
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,1.41957974411207,1.37114433605739,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.32521124570968,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0,0,1.17851434189467,1.28134512719193,0.745597783301202,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,1.97180787687353,0,0,0,0,0,0,0,0.517875767294343,5.34391700633369,1.73485326766136,6.08930956624282,5.07354093963329,4.52167921657868,4.23319345688537,3.64433114856059,0,0,0.884610551949874,0.161766849947409,0.883366073841574,0.484875253135222,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0.255715457330331,0.41557608911912,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0,0,0,0,0,0,0,0,0.205782136407943,0.796137067273973,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0,2.25415471346161,1.01825663922657,0.581857461502877,0.350679099451593,0.316182685621286,0.442830443938806,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0.370389054739423,0,0.546776910884101,0.915112692826091,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,1.12738587736838,1.19613236835183,0.330916980914195,0.777804753376191,1.03327858782185,0.506868376472335,0.469428954583016,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.436039249896986,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0.429742108096597,0,0,0
|short_description=p@chr18:21810578..21810590,-
}}

Latest revision as of 14:15, 5 August 2015

Short description:p@chr18:21810578..21810590, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr18:21810578..21810590, -
Coexpression cluster:MCL_coexpression_mm9:55
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
1
2
3
4
5
6
7




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:21810578..21810590,-&oldid=3908196"