FFCP PHASE1:Mm9::chr13:113257676..113257683,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:113257676..113257683,+|id=chr13:113257676..113257683,+|ontology_enrichment_celltype=CL:0000624!4.36e-11!8;CL:0000893!2.49e-10!6;CL:0002489!2.49e-10!6;CL:0000898!2.49e-10!6;CL:0000809!2.49e-10!6;CL:0000810!2.49e-10!6;CL:0000895!2.49e-10!6;CL:0000808!2.49e-10!6;CL:0000894!2.49e-10!6;CL:0000806!2.49e-10!6;CL:0000807!2.49e-10!6;CL:0000805!2.49e-10!6;CL:0002425!2.49e-10!6;CL:0002436!2.49e-10!6;CL:0002427!2.49e-10!6;CL:0002428!2.49e-10!6;CL:0002429!2.49e-10!6;CL:0002433!2.49e-10!6;CL:0002431!2.49e-10!6;CL:0002432!2.49e-10!6;CL:0000791!8.88e-10!9;CL:0000789!8.88e-10!9;CL:0002420!8.88e-10!9;CL:0002419!8.88e-10!9;CL:0000790!8.88e-10!9;CL:0000222!4.58e-09!7;CL:0000084!7.11e-08!11;CL:0000827!7.11e-08!11;CL:0000192!8.28e-08!3;CL:0000359!8.28e-08!3;CL:0002539!8.28e-08!3;CL:0000514!8.28e-08!3;CL:0000838!3.68e-07!12;CL:0000680!8.52e-07!6;CL:0000183!8.52e-07!6;CL:0000187!8.52e-07!6;CL:0000056!8.52e-07!6|ontology_enrichment_celltype_v019_2=CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0000057,5.62e-30,1;CL:0000632,5.62e-30,1;CL:0000215,4.56e-11,3;CL:0000151,5.71e-11,3;CL:0000499,5.71e-11,3;CL:0000327,5.71e-11,3;CL:0000182,3.64e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!4.99e-13!5;UBERON:0001981!4.99e-13!5;UBERON:0002049!4.99e-13!5;UBERON:0007500!4.99e-13!5;UBERON:0007798!4.99e-13!5;UBERON:0004537!4.99e-13!5;UBERON:0006965!4.99e-13!5;UBERON:0000947!2.23e-10!4;UBERON:0001637!2.23e-10!4;UBERON:0003509!2.23e-10!4;UBERON:0004573!2.23e-10!4;UBERON:0004571!2.23e-10!4;UBERON:0010191!2.23e-10!4;UBERON:0004572!2.23e-10!4;UBERON:0000490!1.39e-09!66;UBERON:0006562!1.81e-08!24;UBERON:0001557!1.81e-08!24;UBERON:0001042!1.81e-08!24;UBERON:0008814!1.81e-08!24;UBERON:0009145!1.81e-08!24;UBERON:0001135!8.28e-08!3;UBERON:0004237!8.28e-08!3;UBERON:0004695!8.28e-08!3;UBERON:0002111!8.28e-08!3;UBERON:0004178!8.28e-08!3;UBERON:0000072!2.53e-07!27;UBERON:0002370!3.94e-07!23;UBERON:0000974!3.94e-07!23;UBERON:0004807!3.94e-07!23;UBERON:0005058!3.94e-07!23;UBERON:0003351!3.94e-07!23;UBERON:0009113!3.94e-07!23;UBERON:0003295!3.94e-07!23;UBERON:0009722!3.94e-07!23;UBERON:0005562!3.94e-07!23;UBERON:0007690!3.94e-07!23;UBERON:0005057!7.79e-07!51;UBERON:0003408!9.04e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0000029,1.10e-29,1;UBERON:0001097,1.10e-29,1;UBERON:0003968,1.10e-29,1;UBERON:0001467,1.10e-29,1;UBERON:0002465,7.15e-11,3;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0.468129052643987,0.171217968225505,0,0.171200729931206,0.262261207256992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85539261585705,2.58127163094416,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0,0,0,0,0.125666591329675,0,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:113257676..113257683,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:113257676..113257683,+ | |||
|description=CAGE_peak_at_chr13:113257676..113257683,+ | |||
|id=chr13:113257676..113257683,+ | |||
|ontology_enrichment_celltype=CL:0000624!4.36e-11!8;CL:0000893!2.49e-10!6;CL:0002489!2.49e-10!6;CL:0000898!2.49e-10!6;CL:0000809!2.49e-10!6;CL:0000810!2.49e-10!6;CL:0000895!2.49e-10!6;CL:0000808!2.49e-10!6;CL:0000894!2.49e-10!6;CL:0000806!2.49e-10!6;CL:0000807!2.49e-10!6;CL:0000805!2.49e-10!6;CL:0002425!2.49e-10!6;CL:0002436!2.49e-10!6;CL:0002427!2.49e-10!6;CL:0002428!2.49e-10!6;CL:0002429!2.49e-10!6;CL:0002433!2.49e-10!6;CL:0002431!2.49e-10!6;CL:0002432!2.49e-10!6;CL:0000791!8.88e-10!9;CL:0000789!8.88e-10!9;CL:0002420!8.88e-10!9;CL:0002419!8.88e-10!9;CL:0000790!8.88e-10!9;CL:0000222!4.58e-09!7;CL:0000084!7.11e-08!11;CL:0000827!7.11e-08!11;CL:0000192!8.28e-08!3;CL:0000359!8.28e-08!3;CL:0002539!8.28e-08!3;CL:0000514!8.28e-08!3;CL:0000838!3.68e-07!12;CL:0000680!8.52e-07!6;CL:0000183!8.52e-07!6;CL:0000187!8.52e-07!6;CL:0000056!8.52e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0000057,5.62e-30,1;CL:0000632,5.62e-30,1;CL:0000215,4.56e-11,3;CL:0000151,5.71e-11,3;CL:0000499,5.71e-11,3;CL:0000327,5.71e-11,3;CL:0000182,3.64e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.99e-13!5;UBERON:0001981!4.99e-13!5;UBERON:0002049!4.99e-13!5;UBERON:0007500!4.99e-13!5;UBERON:0007798!4.99e-13!5;UBERON:0004537!4.99e-13!5;UBERON:0006965!4.99e-13!5;UBERON:0000947!2.23e-10!4;UBERON:0001637!2.23e-10!4;UBERON:0003509!2.23e-10!4;UBERON:0004573!2.23e-10!4;UBERON:0004571!2.23e-10!4;UBERON:0010191!2.23e-10!4;UBERON:0004572!2.23e-10!4;UBERON:0000490!1.39e-09!66;UBERON:0006562!1.81e-08!24;UBERON:0001557!1.81e-08!24;UBERON:0001042!1.81e-08!24;UBERON:0008814!1.81e-08!24;UBERON:0009145!1.81e-08!24;UBERON:0001135!8.28e-08!3;UBERON:0004237!8.28e-08!3;UBERON:0004695!8.28e-08!3;UBERON:0002111!8.28e-08!3;UBERON:0004178!8.28e-08!3;UBERON:0000072!2.53e-07!27;UBERON:0002370!3.94e-07!23;UBERON:0000974!3.94e-07!23;UBERON:0004807!3.94e-07!23;UBERON:0005058!3.94e-07!23;UBERON:0003351!3.94e-07!23;UBERON:0009113!3.94e-07!23;UBERON:0003295!3.94e-07!23;UBERON:0009722!3.94e-07!23;UBERON:0005562!3.94e-07!23;UBERON:0007690!3.94e-07!23;UBERON:0005057!7.79e-07!51;UBERON:0003408!9.04e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0000029,1.10e-29,1;UBERON:0001097,1.10e-29,1;UBERON:0003968,1.10e-29,1;UBERON:0001467,1.10e-29,1;UBERON:0002465,7.15e-11,3;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0.468129052643987,0.171217968225505,0,0.171200729931206,0.262261207256992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85539261585705,2.58127163094416,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0,0,0,0,0.125666591329675,0,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:113257676..113257683,+ | |||
}} |
Latest revision as of 14:54, 5 August 2015
Short description: | p@chr13:113257676..113257683, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:113257676..113257683, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.87e-30 | 1 |
meso-epithelial cell | 2.87e-30 | 1 |
endothelial cell | 2.87e-30 | 1 |
endothelial cell of sinusoid | 2.87e-30 | 1 |
endothelial cell of hepatic sinusoid | 2.87e-30 | 1 |
fibroblast | 5.62e-30 | 1 |
hepatic stellate cell | 5.62e-30 | 1 |
barrier cell | 4.56e-11 | 3 |
secretory cell | 5.71e-11 | 3 |
stromal cell | 5.71e-11 | 3 |
extracellular matrix secreting cell | 5.71e-11 | 3 |
hepatocyte | 3.64e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.87e-30 | 1 |
hepatic sinusoid | 2.87e-30 | 1 |
parenchyma | 2.87e-30 | 1 |
abdomen blood vessel | 2.87e-30 | 1 |
sinusoid | 2.87e-30 | 1 |
digestive system duct | 2.87e-30 | 1 |
abdominal segment blood vessel | 2.87e-30 | 1 |
trunk blood vessel | 2.87e-30 | 1 |
liver parenchyma | 2.87e-30 | 1 |
liver lobule | 2.87e-30 | 1 |
biliary system | 2.87e-30 | 1 |
biliary tree | 2.87e-30 | 1 |
biliary bud | 2.87e-30 | 1 |
hepatic duct | 2.87e-30 | 1 |
lymph node | 1.10e-29 | 1 |
axillary lymph node | 1.10e-29 | 1 |
peripheral lymph node | 1.10e-29 | 1 |
shoulder | 1.10e-29 | 1 |
lymphoid system | 7.15e-11 | 3 |
vessel | 3.64e-07 | 5 |
epithelial tube open at both ends | 3.64e-07 | 5 |
blood vessel | 3.64e-07 | 5 |
vasculature | 3.64e-07 | 5 |
vascular system | 3.64e-07 | 5 |
blood vasculature | 3.64e-07 | 5 |
vascular cord | 3.64e-07 | 5 |