FFCP PHASE1:Mm9::chr13:16106290..16106306,+: Difference between revisions
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{{FFCP|EntrezGene=16323|HGNC=|MCL_coexpression_id=2822|UniProt=Q04998,Q3UY39|association_with_transcript=-1bp_to_ENSMUST00000164993,NM_008380_5end|description=CAGE_peak_1_at_Inhba_5end|id=chr13:16106290..16106306,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,1.15e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!2.03e-08!23;UBERON:0001009!2.03e-08!23;UBERON:0003133!1.38e-07!24;UBERON:0004872!2.72e-07!33;UBERON:0005156!2.87e-07!26;UBERON:0000990!2.87e-07!26;UBERON:0007100!9.70e-07!18;UBERON:0000948!9.70e-07!18;UBERON:0005498!9.70e-07!18;UBERON:0004140!9.70e-07!18;UBERON:0009881!9.70e-07!18;UBERON:0004141!9.70e-07!18;UBERON:0003084!9.70e-07!18;UBERON:0007005!9.70e-07!18;UBERON:0004139!9.70e-07!18;UBERON:0004291!9.70e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0003133,3.00e-13,24;UBERON:0005156,6.99e-12,26;UBERON:0000990,6.99e-12,26;UBERON:0004175,8.79e-10,9;UBERON:0000926,8.84e-10,120;UBERON:0004120,8.84e-10,120;UBERON:0006603,8.84e-10,120;UBERON:0004872,1.05e-08,33;UBERON:0003135,1.81e-08,15;UBERON:0003975,4.15e-08,5;UBERON:0003101,8.57e-08,16;UBERON:0000079,8.57e-08,16;UBERON:0004535,1.23e-07,23;UBERON:0001009,1.23e-07,23;UBERON:0000473,1.53e-07,14;UBERON:0004176,1.65e-07,17;UBERON:0009196,1.65e-07,17;UBERON:0009117,1.65e-07,17;UBERON:0005795,2.05e-07,4;UBERON:0000995,2.05e-07,4;UBERON:0003134,5.06e-07,8;UBERON:0000991,5.80e-07,18;UBERON:0005564,5.80e-07,18|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,2.25261955442667,2.57470978954193,1.54096171402954,0.558405112967355,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.542704961433,17.4368321697565,2.9367480345869,0,0,0,0.777719596297134,0.139986421625363,0,0,0,0,6.17422646486273,0,1.03134418455488,0,0,0,0.677689064138264,0,1.3498495759221,3.9554654502679,0.7104801149461,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0,0,19.9917150399606,9.74873125377533,3.47837386442013,0.860423876981386,9.51959867190851,0.539703191637817,0.649776417447669,0,0.280888840263504,0.511290967734173,0.259786004602869,0,1.26759077799012,2.56652954828636,0,0,40.7003157101083,53.7122914807209,46.5082489413601,0.34255163915718,0,0.890652834388949,0,0,0,0,2.11659672844269,0,37.0792451601561,0,0,0.485300549842228,0,1.45462575940567,0,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0.381210681219194,0.299581278809645,3.20250421973039,1.00523481690292,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,5.90668310331835,1.11966273549084,1.76905930903572,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0,1.29351685369508,0.215567992932842,0.756424320671277,0.175951124163949,0.219195732427575,1.11218899690239,0.348252166522167,0.411564272815887,0.796137067273973,0,0.257347907114715,0.284163499395593,1.86413195281952,2.11073453982987,0.540186184383045,0.473489471170421,0.590292695242212,1.3884040159864,0.697601834251224,1.07309360559848,1.63471479314037,0.658239399653922,1.80584210487005,0.729619285912702,1.31579988682799,0.878200461164203,0.671032093801859,0.630869845692382,0,0,0.528901133327089,0,0,0.257734922644187,0,0,0.190225626112559,0,0.329397909448022,0,1.59165177632921,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,0.592905254174298,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.936113019343682,0.505157755894224,0.358794827043824,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,0.468846746368813,1.14754461763673,0,1.26203287766503,1.95219372148319,0.215423397732799,0.477937595905104,0.445597348164788,0.566153061577665,1.21443210502468,2.04579100537918,1.18586333383957,1.92792789853084,100.919400583079,0.534196811001766,0,0.824850614862677,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,14.0803024838226,203.782452170995,0,3.46261131177108,1.61464426695906,2.11095237248546,0.477489376012546,0.820704498725306,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0.404593039154462,0.578574190077352,0.523511883968059,0.129614973291793,0,0,0.747582730219894,2.31641886639937,9.91701060554643,17.1782565225382,31.7637515922663,23.1193760132135,9.11430693907651,1.25831213310853,0,0,0,0.202725215290164,0,0,0,0,0,0,0.302899349844443,0,0,0.0974578807397524,0,0,0,0,2.33256027184637,8.73000005093208,0,49.548173519112,2.38097111547445,1.07184189539533,0,0,0,0,0.171853182343688,0,0,0,0.900642406448441,2.26571204492102,0.51776031175182,0.207574695168353,0,0.682934423016537,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.760437899670719,0.943131706930381,0.655490552289177,0.320125762024346,0.574354689556133,0,0.579421629724277,0,0.412085900803307,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.752875043322645,0.592302255241736,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.474540072496697,0.197008964751127,0,0.619747364743864,0.385813221962283,0,0.467863216890817,0.644613162144895,0.191288332068843,0.220591419119515,1.15933917810211|short_description=p1@Inhba}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16323 | |||
|HGNC= | |||
|MCL_coexpression_id=2822 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q04998,uniprot:Q3UY39 | |||
|association_with_transcript=-1bp_to_ENSMUST00000164993,NM_008380_5end | |||
|cluster_id=chr13:16106290..16106306,+ | |||
|description=CAGE_peak_1_at_Inhba_5end | |||
|id=chr13:16106290..16106306,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.15e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.03e-08!23;UBERON:0001009!2.03e-08!23;UBERON:0003133!1.38e-07!24;UBERON:0004872!2.72e-07!33;UBERON:0005156!2.87e-07!26;UBERON:0000990!2.87e-07!26;UBERON:0007100!9.70e-07!18;UBERON:0000948!9.70e-07!18;UBERON:0005498!9.70e-07!18;UBERON:0004140!9.70e-07!18;UBERON:0009881!9.70e-07!18;UBERON:0004141!9.70e-07!18;UBERON:0003084!9.70e-07!18;UBERON:0007005!9.70e-07!18;UBERON:0004139!9.70e-07!18;UBERON:0004291!9.70e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,3.00e-13,24;UBERON:0005156,6.99e-12,26;UBERON:0000990,6.99e-12,26;UBERON:0004175,8.79e-10,9;UBERON:0000926,8.84e-10,120;UBERON:0004120,8.84e-10,120;UBERON:0006603,8.84e-10,120;UBERON:0004872,1.05e-08,33;UBERON:0003135,1.81e-08,15;UBERON:0003975,4.15e-08,5;UBERON:0003101,8.57e-08,16;UBERON:0000079,8.57e-08,16;UBERON:0004535,1.23e-07,23;UBERON:0001009,1.23e-07,23;UBERON:0000473,1.53e-07,14;UBERON:0004176,1.65e-07,17;UBERON:0009196,1.65e-07,17;UBERON:0009117,1.65e-07,17;UBERON:0005795,2.05e-07,4;UBERON:0000995,2.05e-07,4;UBERON:0003134,5.06e-07,8;UBERON:0000991,5.80e-07,18;UBERON:0005564,5.80e-07,18 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,2.25261955442667,2.57470978954193,1.54096171402954,0.558405112967355,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.542704961433,17.4368321697565,2.9367480345869,0,0,0,0.777719596297134,0.139986421625363,0,0,0,0,6.17422646486273,0,1.03134418455488,0,0,0,0.677689064138264,0,1.3498495759221,3.9554654502679,0.7104801149461,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0,0,19.9917150399606,9.74873125377533,3.47837386442013,0.860423876981386,9.51959867190851,0.539703191637817,0.649776417447669,0,0.280888840263504,0.511290967734173,0.259786004602869,0,1.26759077799012,2.56652954828636,0,0,40.7003157101083,53.7122914807209,46.5082489413601,0.34255163915718,0,0.890652834388949,0,0,0,0,2.11659672844269,0,37.0792451601561,0,0,0.485300549842228,0,1.45462575940567,0,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0.381210681219194,0.299581278809645,3.20250421973039,1.00523481690292,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,5.90668310331835,1.11966273549084,1.76905930903572,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0,1.29351685369508,0.215567992932842,0.756424320671277,0.175951124163949,0.219195732427575,1.11218899690239,0.348252166522167,0.411564272815887,0.796137067273973,0,0.257347907114715,0.284163499395593,1.86413195281952,2.11073453982987,0.540186184383045,0.473489471170421,0.590292695242212,1.3884040159864,0.697601834251224,1.07309360559848,1.63471479314037,0.658239399653922,1.80584210487005,0.729619285912702,1.31579988682799,0.878200461164203,0.671032093801859,0.630869845692382,0,0,0.528901133327089,0,0,0.257734922644187,0,0,0.190225626112559,0,0.329397909448022,0,1.59165177632921,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,0.592905254174298,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.936113019343682,0.505157755894224,0.358794827043824,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,0.468846746368813,1.14754461763673,0,1.26203287766503,1.95219372148319,0.215423397732799,0.477937595905104,0.445597348164788,0.566153061577665,1.21443210502468,2.04579100537918,1.18586333383957,1.92792789853084,100.919400583079,0.534196811001766,0,0.824850614862677,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,14.0803024838226,203.782452170995,0,3.46261131177108,1.61464426695906,2.11095237248546,0.477489376012546,0.820704498725306,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0.404593039154462,0.578574190077352,0.523511883968059,0.129614973291793,0,0,0.747582730219894,2.31641886639937,9.91701060554643,17.1782565225382,31.7637515922663,23.1193760132135,9.11430693907651,1.25831213310853,0,0,0,0.202725215290164,0,0,0,0,0,0,0.302899349844443,0,0,0.0974578807397524,0,0,0,0,2.33256027184637,8.73000005093208,0,49.548173519112,2.38097111547445,1.07184189539533,0,0,0,0,0.171853182343688,0,0,0,0.900642406448441,2.26571204492102,0.51776031175182,0.207574695168353,0,0.682934423016537,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.760437899670719,0.943131706930381,0.655490552289177,0.320125762024346,0.574354689556133,0,0.579421629724277,0,0.412085900803307,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.752875043322645,0.592302255241736,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.474540072496697,0.197008964751127,0,0.619747364743864,0.385813221962283,0,0.467863216890817,0.644613162144895,0.191288332068843,0.220591419119515,1.15933917810211 | |||
|short_description=p1@Inhba | |||
}} |
Revision as of 16:57, 5 August 2015
Short description: | p1@Inhba |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Inhba_5end |
Coexpression cluster: | MCL_coexpression_mm9:2822 |
Association with transcript: | -1bp_to_ENSMUST00000164993, NM_008380_5end |
EntrezGene: | 16323 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
reproductive organ | 3.00e-13 | 24 |
reproductive structure | 6.99e-12 | 26 |
reproductive system | 6.99e-12 | 26 |
internal genitalia | 8.79e-10 | 9 |
mesoderm | 8.84e-10 | 120 |
mesoderm-derived structure | 8.84e-10 | 120 |
presumptive mesoderm | 8.84e-10 | 120 |
splanchnic layer of lateral plate mesoderm | 1.05e-08 | 33 |
male reproductive organ | 1.81e-08 | 15 |
internal female genitalia | 4.15e-08 | 5 |
male organism | 8.57e-08 | 16 |
male reproductive system | 8.57e-08 | 16 |
cardiovascular system | 1.23e-07 | 23 |
circulatory system | 1.23e-07 | 23 |
testis | 1.53e-07 | 14 |
external genitalia | 1.65e-07 | 17 |
indifferent external genitalia | 1.65e-07 | 17 |
indifferent gonad | 1.65e-07 | 17 |
embryonic uterus | 2.05e-07 | 4 |
uterus | 2.05e-07 | 4 |
female reproductive organ | 5.06e-07 | 8 |
gonad | 5.80e-07 | 18 |
gonad primordium | 5.80e-07 | 18 |