FFCP PHASE1:Mm9::chr15:89209363..89209374,-: Difference between revisions
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{{FFCP|EntrezGene=70113|HGNC=|MCL_coexpression_id=24|UniProt=Q5M8M2|association_with_transcript=-7bp_to_uc007xgm.1_5end|description=CAGE_peak_10_at_Odf3b_5end|id=chr15:89209363..89209374,-|ontology_enrichment_celltype=CL:0000066!1.96e-13!25;CL:0000239!2.16e-12!6;CL:0000677!2.16e-12!6;CL:0000212!2.16e-12!6;CL:0000584!2.16e-12!6;CL:0000223!1.28e-10!20;CL:0000075!1.67e-10!7;CL:0002563!2.05e-10!9;CL:0002251!2.05e-10!9;CL:0000181!2.37e-07!5;CL:0000417!2.37e-07!5;CL:0000668!2.37e-07!5;CL:0000412!2.37e-07!5;CL:0000182!2.37e-07!5;CL:0000473!7.82e-07!3;CL:0000627!7.82e-07!3;CL:0000682!7.82e-07!3|ontology_enrichment_celltype_v019_2=CL:0000066,4.17e-12,25;CL:0000239,2.00e-11,6;CL:0000677,2.00e-11,6;CL:0000584,2.00e-11,6;CL:0000075,8.24e-10,7;CL:0000223,1.47e-09,20;CL:0000182,3.42e-08,5;CL:0002563,1.19e-07,9;CL:0002251,1.19e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.70e-14!15;UBERON:0000160!7.66e-13!43;UBERON:0001242!1.80e-11!13;UBERON:0000060!1.80e-11!13;UBERON:0001262!1.80e-11!13;UBERON:0004786!1.80e-11!13;UBERON:0003350!2.05e-10!9;UBERON:0004808!2.05e-10!9;UBERON:0001277!2.05e-10!9;UBERON:0001007!5.02e-10!128;UBERON:0001555!5.02e-10!128;UBERON:0007026!5.02e-10!128;UBERON:0004119!9.47e-10!130;UBERON:0000925!9.47e-10!130;UBERON:0006595!9.47e-10!130;UBERON:0002107!1.42e-09!22;UBERON:0007499!1.42e-09!22;UBERON:0006925!1.42e-09!22;UBERON:0009497!1.42e-09!22;UBERON:0000015!1.42e-09!22;UBERON:0002423!1.42e-09!22;UBERON:0006235!1.42e-09!22;UBERON:0008835!1.42e-09!22;UBERON:0003894!1.42e-09!22;UBERON:0004161!1.42e-09!22;UBERON:0008836!1.42e-09!22;UBERON:0005409!4.67e-09!59;UBERON:0009854!4.74e-09!23;UBERON:0009856!4.74e-09!23;UBERON:0004921!1.38e-08!126;UBERON:0004185!1.38e-08!126;UBERON:0000485!2.59e-08!11;UBERON:0004923!3.81e-08!24;UBERON:0002365!3.95e-08!25;UBERON:0002330!3.95e-08!25;UBERON:0003929!4.10e-08!55|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.45e-14,31;UBERON:0005409,7.90e-09,47;UBERON:0004921,8.94e-09,114;UBERON:0001007,1.44e-08,116;UBERON:0001555,1.44e-08,116;UBERON:0007026,1.44e-08,116;UBERON:0002107,1.58e-08,22;UBERON:0007499,1.58e-08,22;UBERON:0006925,1.58e-08,22;UBERON:0009497,1.58e-08,22;UBERON:0000015,1.58e-08,22;UBERON:0002423,1.58e-08,22;UBERON:0006235,1.58e-08,22;UBERON:0008835,1.58e-08,22;UBERON:0003894,1.58e-08,22;UBERON:0004161,1.58e-08,22;UBERON:0008836,1.58e-08,22;UBERON:0004119,2.28e-08,118;UBERON:0000925,2.28e-08,118;UBERON:0006595,2.28e-08,118;UBERON:0009854,4.03e-08,23;UBERON:0009856,4.03e-08,23;UBERON:0001242,5.25e-08,13;UBERON:0001262,5.25e-08,13;UBERON:0004786,5.25e-08,13;UBERON:0003350,1.19e-07,9;UBERON:0004808,1.19e-07,9;UBERON:0001277,1.19e-07,9;UBERON:0002365,2.10e-07,25;UBERON:0002330,2.10e-07,25;UBERON:0003929,2.27e-07,55;UBERON:0000344,6.65e-07,15|phase1_expression=0,2.09385244583617,1.36499771816861,12.40103266358,8.5152274090879,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.95995453676044,0.45881856213434,0.57423196411502,2.15380998079537,1.07735616342945,0.570070258369122,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,4.30211938490693,0.679971333707751,2.69851595818909,3.24888208723835,4.48026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,8.26046957459495,2.11560453330835,0,0,0,0,0,0,3.32170343081158,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,1.51296634912286,3.58454291857861,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,2.27320990152401,1.25578189465339,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0.18542530201051,0,0,0,0,0,0,0,0,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@Odf3b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70113 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5M8M2 | |||
|association_with_transcript=-7bp_to_uc007xgm.1_5end | |||
|cluster_id=chr15:89209363..89209374,- | |||
|description=CAGE_peak_10_at_Odf3b_5end | |||
|id=chr15:89209363..89209374,- | |||
|ontology_enrichment_celltype=CL:0000066!1.96e-13!25;CL:0000239!2.16e-12!6;CL:0000677!2.16e-12!6;CL:0000212!2.16e-12!6;CL:0000584!2.16e-12!6;CL:0000223!1.28e-10!20;CL:0000075!1.67e-10!7;CL:0002563!2.05e-10!9;CL:0002251!2.05e-10!9;CL:0000181!2.37e-07!5;CL:0000417!2.37e-07!5;CL:0000668!2.37e-07!5;CL:0000412!2.37e-07!5;CL:0000182!2.37e-07!5;CL:0000473!7.82e-07!3;CL:0000627!7.82e-07!3;CL:0000682!7.82e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.17e-12,25;CL:0000239,2.00e-11,6;CL:0000677,2.00e-11,6;CL:0000584,2.00e-11,6;CL:0000075,8.24e-10,7;CL:0000223,1.47e-09,20;CL:0000182,3.42e-08,5;CL:0002563,1.19e-07,9;CL:0002251,1.19e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.70e-14!15;UBERON:0000160!7.66e-13!43;UBERON:0001242!1.80e-11!13;UBERON:0000060!1.80e-11!13;UBERON:0001262!1.80e-11!13;UBERON:0004786!1.80e-11!13;UBERON:0003350!2.05e-10!9;UBERON:0004808!2.05e-10!9;UBERON:0001277!2.05e-10!9;UBERON:0001007!5.02e-10!128;UBERON:0001555!5.02e-10!128;UBERON:0007026!5.02e-10!128;UBERON:0004119!9.47e-10!130;UBERON:0000925!9.47e-10!130;UBERON:0006595!9.47e-10!130;UBERON:0002107!1.42e-09!22;UBERON:0007499!1.42e-09!22;UBERON:0006925!1.42e-09!22;UBERON:0009497!1.42e-09!22;UBERON:0000015!1.42e-09!22;UBERON:0002423!1.42e-09!22;UBERON:0006235!1.42e-09!22;UBERON:0008835!1.42e-09!22;UBERON:0003894!1.42e-09!22;UBERON:0004161!1.42e-09!22;UBERON:0008836!1.42e-09!22;UBERON:0005409!4.67e-09!59;UBERON:0009854!4.74e-09!23;UBERON:0009856!4.74e-09!23;UBERON:0004921!1.38e-08!126;UBERON:0004185!1.38e-08!126;UBERON:0000485!2.59e-08!11;UBERON:0004923!3.81e-08!24;UBERON:0002365!3.95e-08!25;UBERON:0002330!3.95e-08!25;UBERON:0003929!4.10e-08!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.45e-14,31;UBERON:0005409,7.90e-09,47;UBERON:0004921,8.94e-09,114;UBERON:0001007,1.44e-08,116;UBERON:0001555,1.44e-08,116;UBERON:0007026,1.44e-08,116;UBERON:0002107,1.58e-08,22;UBERON:0007499,1.58e-08,22;UBERON:0006925,1.58e-08,22;UBERON:0009497,1.58e-08,22;UBERON:0000015,1.58e-08,22;UBERON:0002423,1.58e-08,22;UBERON:0006235,1.58e-08,22;UBERON:0008835,1.58e-08,22;UBERON:0003894,1.58e-08,22;UBERON:0004161,1.58e-08,22;UBERON:0008836,1.58e-08,22;UBERON:0004119,2.28e-08,118;UBERON:0000925,2.28e-08,118;UBERON:0006595,2.28e-08,118;UBERON:0009854,4.03e-08,23;UBERON:0009856,4.03e-08,23;UBERON:0001242,5.25e-08,13;UBERON:0001262,5.25e-08,13;UBERON:0004786,5.25e-08,13;UBERON:0003350,1.19e-07,9;UBERON:0004808,1.19e-07,9;UBERON:0001277,1.19e-07,9;UBERON:0002365,2.10e-07,25;UBERON:0002330,2.10e-07,25;UBERON:0003929,2.27e-07,55;UBERON:0000344,6.65e-07,15 | |||
|phase1_expression=0,2.09385244583617,1.36499771816861,12.40103266358,8.5152274090879,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.95995453676044,0.45881856213434,0.57423196411502,2.15380998079537,1.07735616342945,0.570070258369122,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,4.30211938490693,0.679971333707751,2.69851595818909,3.24888208723835,4.48026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,8.26046957459495,2.11560453330835,0,0,0,0,0,0,3.32170343081158,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,1.51296634912286,3.58454291857861,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,2.27320990152401,1.25578189465339,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0.18542530201051,0,0,0,0,0,0,0,0,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@Odf3b | |||
}} |
Revision as of 20:09, 5 August 2015
Short description: | p10@Odf3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Odf3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -7bp_to_uc007xgm.1_5end |
EntrezGene: | 70113 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.17e-12 | 25 |
brush border epithelial cell | 2.00e-11 | 6 |
gut absorptive cell | 2.00e-11 | 6 |
enterocyte | 2.00e-11 | 6 |
columnar/cuboidal epithelial cell | 8.24e-10 | 7 |
endodermal cell | 1.47e-09 | 20 |
hepatocyte | 3.42e-08 | 5 |
intestinal epithelial cell | 1.19e-07 | 9 |
epithelial cell of alimentary canal | 1.19e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.45e-14 | 31 |
gastrointestinal system | 7.90e-09 | 47 |
subdivision of digestive tract | 8.94e-09 | 114 |
digestive system | 1.44e-08 | 116 |
digestive tract | 1.44e-08 | 116 |
primitive gut | 1.44e-08 | 116 |
liver | 1.58e-08 | 22 |
epithelial sac | 1.58e-08 | 22 |
digestive gland | 1.58e-08 | 22 |
epithelium of foregut-midgut junction | 1.58e-08 | 22 |
anatomical boundary | 1.58e-08 | 22 |
hepatobiliary system | 1.58e-08 | 22 |
foregut-midgut junction | 1.58e-08 | 22 |
hepatic diverticulum | 1.58e-08 | 22 |
liver primordium | 1.58e-08 | 22 |
septum transversum | 1.58e-08 | 22 |
liver bud | 1.58e-08 | 22 |
endoderm-derived structure | 2.28e-08 | 118 |
endoderm | 2.28e-08 | 118 |
presumptive endoderm | 2.28e-08 | 118 |
digestive tract diverticulum | 4.03e-08 | 23 |
sac | 4.03e-08 | 23 |
intestinal mucosa | 5.25e-08 | 13 |
wall of intestine | 5.25e-08 | 13 |
gastrointestinal system mucosa | 5.25e-08 | 13 |
epithelium of mucosa | 1.19e-07 | 9 |
gastrointestinal system epithelium | 1.19e-07 | 9 |
intestinal epithelium | 1.19e-07 | 9 |
exocrine gland | 2.10e-07 | 25 |
exocrine system | 2.10e-07 | 25 |
gut epithelium | 2.27e-07 | 55 |
mucosa | 6.65e-07 | 15 |