Personal tools

FFCP PHASE1:Mm9::chr11:3427919..3427962,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=29856|HGNC=|MCL_coexpression_id=10|UniProt=D3YVS1,Q9D7A0|association_with_transcript=0bp_to_ENSMUST00000020718,ENSMUST00000110008,uc007hte.2_5end|description=CAGE_peak_2_at_Smtn_5end|id=chr11:3427919..3427962,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!9.90e-08!18;UBERON:0000948!9.90e-08!18;UBERON:0005498!9.90e-08!18;UBERON:0004140!9.90e-08!18;UBERON:0009881!9.90e-08!18;UBERON:0004141!9.90e-08!18;UBERON:0003084!9.90e-08!18;UBERON:0007005!9.90e-08!18;UBERON:0004139!9.90e-08!18;UBERON:0004291!9.90e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.46e-08,18;UBERON:0000948,2.46e-08,18;UBERON:0005498,2.46e-08,18;UBERON:0004140,2.46e-08,18;UBERON:0009881,2.46e-08,18;UBERON:0004141,2.46e-08,18;UBERON:0003084,2.46e-08,18;UBERON:0007005,2.46e-08,18;UBERON:0004139,2.46e-08,18;UBERON:0004291,2.46e-08,18;UBERON:0003102,3.00e-08,22|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,3.07801948722744,2.08959831311148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0.85960031981627,1.03134418455488,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0.294628585473668,1.42371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,37.2177713349142,0,0,0,1.97180787687353,0,0,0,0,0,0,3.08296475241462,0,0,2.94925055502431,5.78484408793068,3.22861696158482,0.452167921657868,2.70454026412121,0.502666365318702,0,0.578397427679647,12.3845477272982,135.237086556034,38.8681072490293,28.1227646818429,1.86391761218122,0,0.209446706813455,1.02182822083437,0,0,0,0,0,0,0.347648640384553,0.767146371990992,0.20778804455956,0.648965052271031,1.62942982160506,9.33052279575698,0,12.8369532090749,0.520481771850815,2.98872735763515,8.46292010085141,17.7831685046144,8.57259889306731,11.2740073850668,10.4008914261299,17.3331258395141,0,5.29497024469894,6.862093842394,19.7276159184817,6.67313398141435,45.6210338144038,17.2856994582672,0,0,0,0,8.49215667395558,11.9608290590359,6.30217215113552,13.9679393995274,21.8408297239618,22.0601971428951,40.2283724418206,48.0209388505318,49.8588011907814,145.14178762369,270.712148266428,265.986764119953,309.651573366854,278.389546189052,220.501146023291,1.05144974282064,0,0,0.264450566663544,0,0,1.67527699718721,0,0.22237804384487,0.190225626112559,0.949058123089023,0,1.00534083520108,1.79060824837036,2.53453313254856,0.898819408654221,1.08069024937347,1.99141273254367,0.189667900953082,2.62771579002376,0,1.83286195060783,0.193952487167626,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0.333690211432188,0.589676985339609,0.224862112384854,1.62288097110802,0.482354319504834,2.29163266603278,0.287696137450811,0.162135226775035,1.92192989231657,2.87536413054709,1.48856379067401,4.36852742360385,0,6.09951205974501,0,3.32555742299888,0.947457058852424,2.44447464663039,0.509235257325564,0,1.17254380209271,2.85652369063216,1.17080188714679,5.2019597555043,4.20782910332672,4.30527875375215,4.91589944147214,5.69860440157455,3.03763023021174,0,0,0.491764273019036,0,0.160550589987792,0.35163505977661,0,95.1815395560486,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,1.56134093729095,3.73937767701236,1.79175655288934,3.79431282836832,0,1.21390318077491,0,0,2.95301892880773,0,0.775284879504663,0,10.3384239731569,0.632073515871632,0,0,0,0.720244376125241,0.258717367565509,0.428674070063185,0,0.356737635204141,0.493647061806363,0,0,0,3.30792597082443,14.1802177529673,17.4381580831578,13.148217634338,7.5204576721976,3.77524069413641,1.45740418314925,1.66882771809459,0,0,0,0,0,0,0,0,0,7.63736494412091,0.158167996790568,1.21991680276109,0.108005340821801,0.209088296014469,0.87345025498471,1.21377911746339,4.54594006489348,6.28214260761671,0.90730481304255,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.2604087696879,0,0,5.18454011264158,0.316011120628178,0,2.05421914329655,1.29920822977795,1.43221356533985,1.78813219303138,0.600977247599844,1.18151621739662,1.00966449948148,0.228620419965,0.100826185136841,0.194915761479505,0,0.116876902181569,114.952304492912,0,0,0,15.0687883345109,2.81523713176773,4.02933573387983,1.07184189539533,2.00628841614145,1.12950368523413,0.460325236507177,0.572895513439397,0.171853182343688,1.37016503954128,0,0,0.900642406448441,0,1.55328093525546,1.3492355185943,6.3843979744165,8.70741389346084,36.9522209943807,23.476674214334,29.4149613520023,96.2328331380994,87.1528292120523,105.903339165299,86.9278408467463,99.1104062570837,84.6932272823482,67.9837344231346,79.2631386772282,72.4835618219839,64.775942014498,74.9771588863215,67.3253179418331,77.8842352518249,85.5225725980848,86.0601823487393,75.0722660053998,69.861803654565,87.9345820625588,79.145988929293,79.9608044576343,89.0859227890402,80.4993316999799,77.6799531198329,89.2216211935804,77.4686668350857,72.203785581288,56.8831150005868,71.4258837867303,63.0804617908332,76.9416580048873,81.8760629558929,49.6352134851569,85.3145961027041,92.6483960301965,91.1240593988256|short_description=p2@Smtn}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:29856
|HGNC=
|MCL_coexpression_id=10
|TSSclassifier=NA
|UniProt=uniprot:D3YVS1,uniprot:Q9D7A0
|association_with_transcript=0bp_to_ENSMUST00000020718,ENSMUST00000110008,uc007hte.2_5end
|cluster_id=chr11:3427919..3427962,-
|description=CAGE_peak_2_at_Smtn_5end
|id=chr11:3427919..3427962,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!9.90e-08!18;UBERON:0000948!9.90e-08!18;UBERON:0005498!9.90e-08!18;UBERON:0004140!9.90e-08!18;UBERON:0009881!9.90e-08!18;UBERON:0004141!9.90e-08!18;UBERON:0003084!9.90e-08!18;UBERON:0007005!9.90e-08!18;UBERON:0004139!9.90e-08!18;UBERON:0004291!9.90e-08!18
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.46e-08,18;UBERON:0000948,2.46e-08,18;UBERON:0005498,2.46e-08,18;UBERON:0004140,2.46e-08,18;UBERON:0009881,2.46e-08,18;UBERON:0004141,2.46e-08,18;UBERON:0003084,2.46e-08,18;UBERON:0007005,2.46e-08,18;UBERON:0004139,2.46e-08,18;UBERON:0004291,2.46e-08,18;UBERON:0003102,3.00e-08,22
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,3.07801948722744,2.08959831311148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0.85960031981627,1.03134418455488,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0.294628585473668,1.42371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,37.2177713349142,0,0,0,1.97180787687353,0,0,0,0,0,0,3.08296475241462,0,0,2.94925055502431,5.78484408793068,3.22861696158482,0.452167921657868,2.70454026412121,0.502666365318702,0,0.578397427679647,12.3845477272982,135.237086556034,38.8681072490293,28.1227646818429,1.86391761218122,0,0.209446706813455,1.02182822083437,0,0,0,0,0,0,0.347648640384553,0.767146371990992,0.20778804455956,0.648965052271031,1.62942982160506,9.33052279575698,0,12.8369532090749,0.520481771850815,2.98872735763515,8.46292010085141,17.7831685046144,8.57259889306731,11.2740073850668,10.4008914261299,17.3331258395141,0,5.29497024469894,6.862093842394,19.7276159184817,6.67313398141435,45.6210338144038,17.2856994582672,0,0,0,0,8.49215667395558,11.9608290590359,6.30217215113552,13.9679393995274,21.8408297239618,22.0601971428951,40.2283724418206,48.0209388505318,49.8588011907814,145.14178762369,270.712148266428,265.986764119953,309.651573366854,278.389546189052,220.501146023291,1.05144974282064,0,0,0.264450566663544,0,0,1.67527699718721,0,0.22237804384487,0.190225626112559,0.949058123089023,0,1.00534083520108,1.79060824837036,2.53453313254856,0.898819408654221,1.08069024937347,1.99141273254367,0.189667900953082,2.62771579002376,0,1.83286195060783,0.193952487167626,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0.333690211432188,0.589676985339609,0.224862112384854,1.62288097110802,0.482354319504834,2.29163266603278,0.287696137450811,0.162135226775035,1.92192989231657,2.87536413054709,1.48856379067401,4.36852742360385,0,6.09951205974501,0,3.32555742299888,0.947457058852424,2.44447464663039,0.509235257325564,0,1.17254380209271,2.85652369063216,1.17080188714679,5.2019597555043,4.20782910332672,4.30527875375215,4.91589944147214,5.69860440157455,3.03763023021174,0,0,0.491764273019036,0,0.160550589987792,0.35163505977661,0,95.1815395560486,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,1.56134093729095,3.73937767701236,1.79175655288934,3.79431282836832,0,1.21390318077491,0,0,2.95301892880773,0,0.775284879504663,0,10.3384239731569,0.632073515871632,0,0,0,0.720244376125241,0.258717367565509,0.428674070063185,0,0.356737635204141,0.493647061806363,0,0,0,3.30792597082443,14.1802177529673,17.4381580831578,13.148217634338,7.5204576721976,3.77524069413641,1.45740418314925,1.66882771809459,0,0,0,0,0,0,0,0,0,7.63736494412091,0.158167996790568,1.21991680276109,0.108005340821801,0.209088296014469,0.87345025498471,1.21377911746339,4.54594006489348,6.28214260761671,0.90730481304255,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.2604087696879,0,0,5.18454011264158,0.316011120628178,0,2.05421914329655,1.29920822977795,1.43221356533985,1.78813219303138,0.600977247599844,1.18151621739662,1.00966449948148,0.228620419965,0.100826185136841,0.194915761479505,0,0.116876902181569,114.952304492912,0,0,0,15.0687883345109,2.81523713176773,4.02933573387983,1.07184189539533,2.00628841614145,1.12950368523413,0.460325236507177,0.572895513439397,0.171853182343688,1.37016503954128,0,0,0.900642406448441,0,1.55328093525546,1.3492355185943,6.3843979744165,8.70741389346084,36.9522209943807,23.476674214334,29.4149613520023,96.2328331380994,87.1528292120523,105.903339165299,86.9278408467463,99.1104062570837,84.6932272823482,67.9837344231346,79.2631386772282,72.4835618219839,64.775942014498,74.9771588863215,67.3253179418331,77.8842352518249,85.5225725980848,86.0601823487393,75.0722660053998,69.861803654565,87.9345820625588,79.145988929293,79.9608044576343,89.0859227890402,80.4993316999799,77.6799531198329,89.2216211935804,77.4686668350857,72.203785581288,56.8831150005868,71.4258837867303,63.0804617908332,76.9416580048873,81.8760629558929,49.6352134851569,85.3145961027041,92.6483960301965,91.1240593988256
|short_description=p2@Smtn
}}

Revision as of 20:38, 5 August 2015

Short description:p2@Smtn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Smtn_5end
Coexpression cluster:MCL_coexpression_mm9:10
Association with transcript: 0bp_to_ENSMUST00000020718, ENSMUST00000110008, uc007hte.2_5end
EntrezGene:29856
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Smtn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A737.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F5135.24
bone (os femoris), neonate N16.CNhs11225.1525-43A638.87
bone (os femoris), neonate N20.CNhs11195.1350-25C328.12
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G412.84
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C98.46
eyeball, embryo E17.CNhs11023.1261-18D417.78
eyeball, neonate N00.CNhs11207.633-15C68.57
eyeball, neonate N01.CNhs11140.1532-43E711.27
eyeball, neonate N02.CNhs11205.1551-44G810.40
eyeball, neonate N16.CNhs11188.777-19A217.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E26.86
forelimb, embryo E14.CNhs10577.413-26A819.73
forelimb, embryo E15.CNhs11007.437-20E76.67
forelimb, embryo E17.CNhs10598.1517-43C445.62
forelimb, embryo E18.CNhs11008.1520-43B517.29
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E98.49
heart, embryo E12.CNhs11015.353-12F511.96
heart, embryo E13.CNhs11013.376-3I96.30
heart, embryo E14.CNhs10597.403-26D413.97
heart, embryo E15.CNhs11017.431-16C821.84
heart, embryo E16.CNhs11021.457-17C622.06
heart, embryo E17.CNhs11025.479-18E540.23
heart, embryo E18.CNhs11030.1283-20G348.02
heart, neonate N00.CNhs11213.639-21E349.86
heart, neonate N03.CNhs11221.1349-25I2145.14
heart, neonate N10.CNhs11118.749-24G1270.71
heart, neonate N16.CNhs11209.782-15G1265.99
heart, neonate N20.CNhs11127.821-26I6309.65
heart, neonate N25.CNhs11196.1351-25D3278.39
heart, neonate N30.CNhs11202.1390-42D2220.50
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H16.10
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C295.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D810.34
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C314.18
skin, neonate N00.CNhs11124.650-25G417.44
skin, neonate N03.CNhs11215.662-22H313.15
skin, neonate N06.CNhs11097.693-20I57.52
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A94.55
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B4114.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E415.07
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H28.71
whole body, embryo E14.5.CNhs10578.420-27D236.95
whole body, embryo E14.CNhs10519.395-14B123.48
whole body, embryo E16.CNhs10514.453-14F229.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G596.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G587.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5105.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G586.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G599.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G584.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G567.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G579.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G572.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G564.78
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G574.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G567.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G577.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G585.52
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G586.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G575.07
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G569.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G587.93
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G579.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G579.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G589.09
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G580.50
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G577.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G589.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G577.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G572.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G556.88
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G571.43
whole body, embryo E17.5.CNhs10513.490-9F963.08
whole body, embryo E17.CNhs10517.475-3I576.94
whole body, embryo E18.CNhs10516.493-3B381.88
whole body, neonate N00.CNhs10525.657-19C249.64
whole body, neonate N01.CNhs10576.659-23C685.31
whole body, neonate N06.CNhs10515.692-21D192.65
whole body, neonate N10.CNhs10518.761-6B491.12





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primary circulatory organ2.46e-0818
heart2.46e-0818
primitive heart tube2.46e-0818
primary heart field2.46e-0818
anterior lateral plate mesoderm2.46e-0818
heart tube2.46e-0818
heart primordium2.46e-0818
cardiac mesoderm2.46e-0818
cardiogenic plate2.46e-0818
heart rudiment2.46e-0818
surface structure3.00e-0822
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:3427919..3427962,-&oldid=3939544"