FFCP PHASE1:Mm9::chr15:9133413..9133415,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:9133413..9133415,+|id=chr15:9133413..9133415,+|ontology_enrichment_celltype=CL:0002031!1.94e-14!25;CL:0000988!3.46e-11!32;CL:0002032!3.46e-11!32;CL:0000037!3.46e-11!32;CL:0000566!3.46e-11!32;CL:0000837!3.46e-11!32;CL:0000791!1.20e-10!9;CL:0000789!1.20e-10!9;CL:0002420!1.20e-10!9;CL:0002419!1.20e-10!9;CL:0000790!1.20e-10!9;CL:0000738!1.83e-10!17;CL:0002087!1.83e-10!17;CL:0002320!2.94e-10!46;CL:0000134!2.94e-10!46;CL:0000542!3.71e-10!13;CL:0000051!3.71e-10!13;CL:0000219!1.64e-09!54;CL:0000838!2.17e-09!12;CL:0000624!2.47e-09!8;CL:0000063!3.86e-09!66;CL:0000084!2.76e-08!11;CL:0000827!2.76e-08!11;CL:0000893!2.73e-07!6;CL:0002489!2.73e-07!6;CL:0000898!2.73e-07!6;CL:0000809!2.73e-07!6;CL:0000810!2.73e-07!6;CL:0000895!2.73e-07!6;CL:0000808!2.73e-07!6;CL:0000894!2.73e-07!6;CL:0000806!2.73e-07!6;CL:0000807!2.73e-07!6;CL:0000805!2.73e-07!6;CL:0002425!2.73e-07!6;CL:0002436!2.73e-07!6;CL:0002427!2.73e-07!6;CL:0002428!2.73e-07!6;CL:0002429!2.73e-07!6;CL:0002433!2.73e-07!6;CL:0002431!2.73e-07!6;CL:0002432!2.73e-07!6;CL:0000553!5.03e-07!6;CL:0000556!5.03e-07!6|ontology_enrichment_celltype_v019_2=CL:0000057,3.62e-14,1;CL:0000632,3.62e-14,1;CL:0000213,4.85e-14,1;CL:0002078,4.85e-14,1;CL:0000115,4.85e-14,1;CL:0002262,4.85e-14,1;CL:1000398,4.85e-14,1;CL:0000625,6.50e-14,1;CL:0002476,1.76e-07,2;CL:0000738,3.08e-07,17;CL:0002087,3.08e-07,17;CL:0002320,4.10e-07,46;CL:0000134,4.10e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.94e-10!46|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.85e-14,1;UBERON:0001281,4.85e-14,1;UBERON:0000353,4.85e-14,1;UBERON:0003497,4.85e-14,1;UBERON:0003909,4.85e-14,1;UBERON:0003928,4.85e-14,1;UBERON:0003835,4.85e-14,1;UBERON:0003513,4.85e-14,1;UBERON:0001280,4.85e-14,1;UBERON:0004647,4.85e-14,1;UBERON:0002294,4.85e-14,1;UBERON:0001173,4.85e-14,1;UBERON:0004912,4.85e-14,1;UBERON:0005171,4.85e-14,1;UBERON:0002384,4.10e-07,46|phase1_expression=0,0,0,1.81478526784098,0.500895729946347,0,0.233612640595526,0.258246646883153,1.12630977721333,0.936258105287974,0.513653904676515,0.0797721589953364,0.513602189793617,0.174840804837995,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0.411343300817216,0.42438965179803,0,0,0,0.319984845586813,0.45881856213434,0,0,0,0.380046838912748,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0.151452386666368,0.982430281388212,3.47837386442013,6.0229671388697,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.865964164044856,0.506719730950197,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0,1.50791283939272,0,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,1.33191572024439,0.179427713218951,0.671538465456314,0,0,0,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0.128050304809739,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p@chr15:9133413..9133415,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:9133413..9133415,+ | |||
|description=CAGE_peak_at_chr15:9133413..9133415,+ | |||
|id=chr15:9133413..9133415,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.94e-14!25;CL:0000988!3.46e-11!32;CL:0002032!3.46e-11!32;CL:0000037!3.46e-11!32;CL:0000566!3.46e-11!32;CL:0000837!3.46e-11!32;CL:0000791!1.20e-10!9;CL:0000789!1.20e-10!9;CL:0002420!1.20e-10!9;CL:0002419!1.20e-10!9;CL:0000790!1.20e-10!9;CL:0000738!1.83e-10!17;CL:0002087!1.83e-10!17;CL:0002320!2.94e-10!46;CL:0000134!2.94e-10!46;CL:0000542!3.71e-10!13;CL:0000051!3.71e-10!13;CL:0000219!1.64e-09!54;CL:0000838!2.17e-09!12;CL:0000624!2.47e-09!8;CL:0000063!3.86e-09!66;CL:0000084!2.76e-08!11;CL:0000827!2.76e-08!11;CL:0000893!2.73e-07!6;CL:0002489!2.73e-07!6;CL:0000898!2.73e-07!6;CL:0000809!2.73e-07!6;CL:0000810!2.73e-07!6;CL:0000895!2.73e-07!6;CL:0000808!2.73e-07!6;CL:0000894!2.73e-07!6;CL:0000806!2.73e-07!6;CL:0000807!2.73e-07!6;CL:0000805!2.73e-07!6;CL:0002425!2.73e-07!6;CL:0002436!2.73e-07!6;CL:0002427!2.73e-07!6;CL:0002428!2.73e-07!6;CL:0002429!2.73e-07!6;CL:0002433!2.73e-07!6;CL:0002431!2.73e-07!6;CL:0002432!2.73e-07!6;CL:0000553!5.03e-07!6;CL:0000556!5.03e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.62e-14,1;CL:0000632,3.62e-14,1;CL:0000213,4.85e-14,1;CL:0002078,4.85e-14,1;CL:0000115,4.85e-14,1;CL:0002262,4.85e-14,1;CL:1000398,4.85e-14,1;CL:0000625,6.50e-14,1;CL:0002476,1.76e-07,2;CL:0000738,3.08e-07,17;CL:0002087,3.08e-07,17;CL:0002320,4.10e-07,46;CL:0000134,4.10e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.94e-10!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.85e-14,1;UBERON:0001281,4.85e-14,1;UBERON:0000353,4.85e-14,1;UBERON:0003497,4.85e-14,1;UBERON:0003909,4.85e-14,1;UBERON:0003928,4.85e-14,1;UBERON:0003835,4.85e-14,1;UBERON:0003513,4.85e-14,1;UBERON:0001280,4.85e-14,1;UBERON:0004647,4.85e-14,1;UBERON:0002294,4.85e-14,1;UBERON:0001173,4.85e-14,1;UBERON:0004912,4.85e-14,1;UBERON:0005171,4.85e-14,1;UBERON:0002384,4.10e-07,46 | |||
|phase1_expression=0,0,0,1.81478526784098,0.500895729946347,0,0.233612640595526,0.258246646883153,1.12630977721333,0.936258105287974,0.513653904676515,0.0797721589953364,0.513602189793617,0.174840804837995,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0.411343300817216,0.42438965179803,0,0,0,0.319984845586813,0.45881856213434,0,0,0,0.380046838912748,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0.151452386666368,0.982430281388212,3.47837386442013,6.0229671388697,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.865964164044856,0.506719730950197,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0,1.50791283939272,0,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,1.33191572024439,0.179427713218951,0.671538465456314,0,0,0,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0.128050304809739,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr15:9133413..9133415,+ | |||
}} |
Latest revision as of 20:49, 5 August 2015
Short description: | p@chr15:9133413..9133415, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:9133413..9133415, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.62e-14 | 1 |
hepatic stellate cell | 3.62e-14 | 1 |
lining cell | 4.85e-14 | 1 |
meso-epithelial cell | 4.85e-14 | 1 |
endothelial cell | 4.85e-14 | 1 |
endothelial cell of sinusoid | 4.85e-14 | 1 |
endothelial cell of hepatic sinusoid | 4.85e-14 | 1 |
CD8-positive, alpha-beta T cell | 6.50e-14 | 1 |
bone marrow macrophage | 1.76e-07 | 2 |
leukocyte | 3.08e-07 | 17 |
nongranular leukocyte | 3.08e-07 | 17 |
connective tissue cell | 4.10e-07 | 46 |
mesenchymal cell | 4.10e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bile duct | 4.85e-14 | 1 |
hepatic sinusoid | 4.85e-14 | 1 |
parenchyma | 4.85e-14 | 1 |
abdomen blood vessel | 4.85e-14 | 1 |
sinusoid | 4.85e-14 | 1 |
digestive system duct | 4.85e-14 | 1 |
abdominal segment blood vessel | 4.85e-14 | 1 |
trunk blood vessel | 4.85e-14 | 1 |
liver parenchyma | 4.85e-14 | 1 |
liver lobule | 4.85e-14 | 1 |
biliary system | 4.85e-14 | 1 |
biliary tree | 4.85e-14 | 1 |
biliary bud | 4.85e-14 | 1 |
hepatic duct | 4.85e-14 | 1 |
connective tissue | 4.10e-07 | 46 |