FFCP PHASE1:Mm9::chr15:98860359..98860380,+: Difference between revisions
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{{FFCP|EntrezGene=22146|HGNC=|UniProt=P68373,Q52L87|association_with_transcript=37bp_to_ENSMUST00000058914,NM_009448,uc007xom.1_5end|description=CAGE_peak_4_at_Tuba1c_5end|id=chr15:98860359..98860380,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002603,1.60e-10,2;CL:0000219,9.44e-09,54;CL:0000333,8.85e-08,10;CL:0000095,8.85e-08,10;CL:0000243,8.85e-08,10;CL:0000123,8.85e-08,10;CL:0000125,8.85e-08,10;CL:0000030,8.85e-08,10;CL:0000339,8.85e-08,10;CL:0000128,1.35e-07,6;CL:0000126,1.35e-07,6;CL:0000127,1.35e-07,6;CL:0000349,2.36e-07,3;CL:0000351,2.36e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,2.36e-07,3;UBERON:0000307,2.36e-07,3;UBERON:0007010,2.36e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.516493293766305,1.267098499365,0.70219357896598,0.513653904676515,0.478632953972018,0.342401459862411,0.262261207256992,0,0.404950534779652,0.699561878128147,0.157731082679119,0,0,1.36069264241712,0.198581902401771,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0.430942465371778,0,0,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,0.125896817975577,0.304130793658544,0,3.9119567217402,1.09012578190223,1.09843091367236,0.388859798148567,0.419959264876088,0,0.167782606057736,0.725362142011344,1.00828139742739,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0.367472397644862,0,0.919218786610021,0,0,0,0.131886287730194,0,0.52091337055676,0,0,0,0,0,0.186399445825301,0.984440513331393,1.88928900266964,0,0,0,0,0,0,0.280888840263504,0.681721290312231,2.07828803682295,1.7666978725517,0.281686839553361,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0,0.258937883647172,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,2.65383165584962,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0.255457055208591,1.07833612055328,1.79970819298022,0.508280908292259,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0.459804208866946,0.540186389416048,0.150704817835715,0.272145996605311,0.384341160854549,0.187403449119458,0,0.215567992932842,0.378212160335639,0.175951124163949,0,0.556094498451196,0.696504333044333,0.61734640922383,0.398068533636986,0,0.257347907114715,0.568326998791185,0.207125772535502,0.703578179943289,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0.804820204198858,0.233530684734339,0.658239399653922,0.32833492815819,0,0.292399974850665,0.658650345873152,0.134206418760372,0.210289948564127,0,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.432276099749388,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0,0,0,0.500535317148282,0.589676985339609,0.674586337154561,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.648540907100142,0.549122826376163,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,1.08781136763742,0,0,0,0,0.327869890753351,0,0,0,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0,0,0,0.469343416127421,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.328281799490123,0.291480836629851,0.18542530201051,1.02522528478712,0.412773735926445,0.185194527369712,0.188368457004691,0.956859594047176,0.228778173206523,0.509935289981566,0.979660166265606,0.967399816630967,0.954670618015114,0.158167996790568,0.609958401380546,0.216010681643603,0.209088296014469,0,0.134864346384821,0.247960367176008,0.26175594198403,0,0,5.6369293868419,0,0,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,0.2604087696879,0,0,3.16833006883652,0.632022241256357,0.405450430580328,0,0.129920822977795,0.358053391334963,0,0.360586348559907,0.295379054349154,0.100966449948148,0.304827226619999,0.403304740547362,0.38983152295901,0.384847366561318,0.467507608726276,0.226730383615211,0.887943813496259,2.51198798506532,1.67884616364078,0.19318959403219,0.187682475451182,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0.474540072496697,0.29551344712669,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0|short_description=p4@Tuba1c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22146 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P68373,uniprot:Q52L87 | |||
|association_with_transcript=37bp_to_ENSMUST00000058914,NM_009448,uc007xom.1_5end | |||
|cluster_id=chr15:98860359..98860380,+ | |||
|description=CAGE_peak_4_at_Tuba1c_5end | |||
|id=chr15:98860359..98860380,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,1.60e-10,2;CL:0000219,9.44e-09,54;CL:0000333,8.85e-08,10;CL:0000095,8.85e-08,10;CL:0000243,8.85e-08,10;CL:0000123,8.85e-08,10;CL:0000125,8.85e-08,10;CL:0000030,8.85e-08,10;CL:0000339,8.85e-08,10;CL:0000128,1.35e-07,6;CL:0000126,1.35e-07,6;CL:0000127,1.35e-07,6;CL:0000349,2.36e-07,3;CL:0000351,2.36e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,2.36e-07,3;UBERON:0000307,2.36e-07,3;UBERON:0007010,2.36e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.516493293766305,1.267098499365,0.70219357896598,0.513653904676515,0.478632953972018,0.342401459862411,0.262261207256992,0,0.404950534779652,0.699561878128147,0.157731082679119,0,0,1.36069264241712,0.198581902401771,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0.430942465371778,0,0,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,0.125896817975577,0.304130793658544,0,3.9119567217402,1.09012578190223,1.09843091367236,0.388859798148567,0.419959264876088,0,0.167782606057736,0.725362142011344,1.00828139742739,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0.367472397644862,0,0.919218786610021,0,0,0,0.131886287730194,0,0.52091337055676,0,0,0,0,0,0.186399445825301,0.984440513331393,1.88928900266964,0,0,0,0,0,0,0.280888840263504,0.681721290312231,2.07828803682295,1.7666978725517,0.281686839553361,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0,0.258937883647172,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,2.65383165584962,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0.255457055208591,1.07833612055328,1.79970819298022,0.508280908292259,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0.459804208866946,0.540186389416048,0.150704817835715,0.272145996605311,0.384341160854549,0.187403449119458,0,0.215567992932842,0.378212160335639,0.175951124163949,0,0.556094498451196,0.696504333044333,0.61734640922383,0.398068533636986,0,0.257347907114715,0.568326998791185,0.207125772535502,0.703578179943289,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0.804820204198858,0.233530684734339,0.658239399653922,0.32833492815819,0,0.292399974850665,0.658650345873152,0.134206418760372,0.210289948564127,0,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.432276099749388,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0,0,0,0.500535317148282,0.589676985339609,0.674586337154561,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.648540907100142,0.549122826376163,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,1.08781136763742,0,0,0,0,0.327869890753351,0,0,0,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0,0,0,0.469343416127421,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.328281799490123,0.291480836629851,0.18542530201051,1.02522528478712,0.412773735926445,0.185194527369712,0.188368457004691,0.956859594047176,0.228778173206523,0.509935289981566,0.979660166265606,0.967399816630967,0.954670618015114,0.158167996790568,0.609958401380546,0.216010681643603,0.209088296014469,0,0.134864346384821,0.247960367176008,0.26175594198403,0,0,5.6369293868419,0,0,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,0.2604087696879,0,0,3.16833006883652,0.632022241256357,0.405450430580328,0,0.129920822977795,0.358053391334963,0,0.360586348559907,0.295379054349154,0.100966449948148,0.304827226619999,0.403304740547362,0.38983152295901,0.384847366561318,0.467507608726276,0.226730383615211,0.887943813496259,2.51198798506532,1.67884616364078,0.19318959403219,0.187682475451182,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0.474540072496697,0.29551344712669,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | |||
|short_description=p4@Tuba1c | |||
}} |
Revision as of 23:50, 5 August 2015
Short description: | p4@Tuba1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tuba1c_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENSMUST00000058914, NM_009448, uc007xom.1_5end |
EntrezGene: | 22146 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 1.60e-10 | 2 |
motile cell | 9.44e-09 | 54 |
migratory neural crest cell | 8.85e-08 | 10 |
neuron associated cell | 8.85e-08 | 10 |
glial cell (sensu Vertebrata) | 8.85e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 8.85e-08 | 10 |
glial cell | 8.85e-08 | 10 |
glioblast | 8.85e-08 | 10 |
glioblast (sensu Vertebrata) | 8.85e-08 | 10 |
oligodendrocyte | 1.35e-07 | 6 |
macroglial cell | 1.35e-07 | 6 |
astrocyte | 1.35e-07 | 6 |
extraembryonic cell | 2.36e-07 | 3 |
trophoblast cell | 2.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 2.36e-07 | 3 |
blastula | 2.36e-07 | 3 |
cleaving embryo | 2.36e-07 | 3 |