FFCP PHASE1:Mm9::chr3:127493119..127493136,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=889|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:127493119..127493136,-|id=chr3:127493119..127493136,-|ontology_enrichment_celltype=CL:0002563!3.93e-10!9;CL:0002251!3.93e-10!9;CL:0000239!4.17e-07!6;CL:0000677!4.17e-07!6;CL:0000212!4.17e-07!6;CL:0000584!4.17e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.81e-33,9;CL:0002251,1.81e-33,9;CL:0000066,2.34e-25,25;CL:0000239,8.33e-20,6;CL:0000677,8.33e-20,6;CL:0000584,8.33e-20,6;CL:0002076,1.02e-19,15;CL:0000223,3.30e-18,20;CL:0000075,5.77e-17,7;CL:0002250,1.54e-15,3;CL:0000682,3.90e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.47e-13!15;UBERON:0001242!1.00e-11!13;UBERON:0000060!1.00e-11!13;UBERON:0001262!1.00e-11!13;UBERON:0004786!1.00e-11!13;UBERON:0004923!1.24e-11!24;UBERON:0005409!2.35e-11!59;UBERON:0000160!2.74e-11!43;UBERON:0003350!3.93e-10!9;UBERON:0004808!3.93e-10!9;UBERON:0001277!3.93e-10!9;UBERON:0000485!1.10e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.81e-43,13;UBERON:0001262,1.81e-43,13;UBERON:0004786,1.81e-43,13;UBERON:0000344,1.80e-37,15;UBERON:0003350,1.81e-33,9;UBERON:0004808,1.81e-33,9;UBERON:0001277,1.81e-33,9;UBERON:0000160,5.46e-28,31;UBERON:0000485,3.19e-27,11;UBERON:0004923,7.95e-23,24;UBERON:0005409,9.64e-18,47;UBERON:0000331,2.98e-15,3;UBERON:0002116,2.98e-15,3;UBERON:0001204,2.98e-15,3;UBERON:0001168,2.98e-15,3;UBERON:0002108,1.42e-11,4;UBERON:0004921,4.94e-07,114;UBERON:0001007,7.21e-07,116;UBERON:0001555,7.21e-07,116;UBERON:0007026,7.21e-07,116|phase1_expression=0,2.79180326111489,3.18499467572675,0.60492842261366,3.00537437967808,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0.639969691173627,0.68822784320151,1.14846392823004,1.29228598847722,1.939241094173,1.33016393619462,3.2763916868791,3.32595765982957,0,0.61506478758457,0,3.46621943701529,1.99481574430191,3.67504841272264,0.418531630736908,0,0,0,0,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0.075726193333184,0,1.15945795480671,0,0,0,0,0,0,0.340860645156116,0.519572009205738,0,0,0,0,0,0,0.253359865475099,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.766371165625774,0.11981512450592,0,0.381210681219194,0,0,0,0,0.255715457330331,0,0,0,0.373220911830279,0.758168275301024,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,1.32225283331772,0,0,0.515469845288373,0.403367049246685,0.889512175379481,0.570676878337677,0.474529061544512,0.823494773620054,1.25667604400135,0.596869416123452,0.779856348476481,0,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.295220295959204,0,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,2.38307724027652,0,0,0,0.177340233642274,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0.170870880797853,0.412773735926445,0,0.376736914009382,0.27338845544205,0.228778173206523,0.509935289981566,0.419854356970974,0.138199973804424,0,0,0,0,0,0,0,0.247960367176008,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0.117357238645754,0,0.209718688851422,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0.240390899039938,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.441182838239031,0|short_description=p@chr3:127493119..127493136,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=889 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:127493119..127493136,- | |||
|description=CAGE_peak_at_chr3:127493119..127493136,- | |||
|id=chr3:127493119..127493136,- | |||
|ontology_enrichment_celltype=CL:0002563!3.93e-10!9;CL:0002251!3.93e-10!9;CL:0000239!4.17e-07!6;CL:0000677!4.17e-07!6;CL:0000212!4.17e-07!6;CL:0000584!4.17e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.81e-33,9;CL:0002251,1.81e-33,9;CL:0000066,2.34e-25,25;CL:0000239,8.33e-20,6;CL:0000677,8.33e-20,6;CL:0000584,8.33e-20,6;CL:0002076,1.02e-19,15;CL:0000223,3.30e-18,20;CL:0000075,5.77e-17,7;CL:0002250,1.54e-15,3;CL:0000682,3.90e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.47e-13!15;UBERON:0001242!1.00e-11!13;UBERON:0000060!1.00e-11!13;UBERON:0001262!1.00e-11!13;UBERON:0004786!1.00e-11!13;UBERON:0004923!1.24e-11!24;UBERON:0005409!2.35e-11!59;UBERON:0000160!2.74e-11!43;UBERON:0003350!3.93e-10!9;UBERON:0004808!3.93e-10!9;UBERON:0001277!3.93e-10!9;UBERON:0000485!1.10e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.81e-43,13;UBERON:0001262,1.81e-43,13;UBERON:0004786,1.81e-43,13;UBERON:0000344,1.80e-37,15;UBERON:0003350,1.81e-33,9;UBERON:0004808,1.81e-33,9;UBERON:0001277,1.81e-33,9;UBERON:0000160,5.46e-28,31;UBERON:0000485,3.19e-27,11;UBERON:0004923,7.95e-23,24;UBERON:0005409,9.64e-18,47;UBERON:0000331,2.98e-15,3;UBERON:0002116,2.98e-15,3;UBERON:0001204,2.98e-15,3;UBERON:0001168,2.98e-15,3;UBERON:0002108,1.42e-11,4;UBERON:0004921,4.94e-07,114;UBERON:0001007,7.21e-07,116;UBERON:0001555,7.21e-07,116;UBERON:0007026,7.21e-07,116 | |||
|phase1_expression=0,2.79180326111489,3.18499467572675,0.60492842261366,3.00537437967808,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0.639969691173627,0.68822784320151,1.14846392823004,1.29228598847722,1.939241094173,1.33016393619462,3.2763916868791,3.32595765982957,0,0.61506478758457,0,3.46621943701529,1.99481574430191,3.67504841272264,0.418531630736908,0,0,0,0,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0.075726193333184,0,1.15945795480671,0,0,0,0,0,0,0.340860645156116,0.519572009205738,0,0,0,0,0,0,0.253359865475099,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.766371165625774,0.11981512450592,0,0.381210681219194,0,0,0,0,0.255715457330331,0,0,0,0.373220911830279,0.758168275301024,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,1.32225283331772,0,0,0.515469845288373,0.403367049246685,0.889512175379481,0.570676878337677,0.474529061544512,0.823494773620054,1.25667604400135,0.596869416123452,0.779856348476481,0,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.295220295959204,0,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,2.38307724027652,0,0,0,0.177340233642274,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0.170870880797853,0.412773735926445,0,0.376736914009382,0.27338845544205,0.228778173206523,0.509935289981566,0.419854356970974,0.138199973804424,0,0,0,0,0,0,0,0.247960367176008,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0.117357238645754,0,0.209718688851422,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0.240390899039938,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.441182838239031,0 | |||
|short_description=p@chr3:127493119..127493136,- | |||
}} |
Latest revision as of 00:23, 6 August 2015
Short description: | p@chr3:127493119..127493136, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:127493119..127493136, - |
Coexpression cluster: | MCL_coexpression_mm9:889 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.81e-33 | 9 |
epithelial cell of alimentary canal | 1.81e-33 | 9 |
epithelial cell | 2.34e-25 | 25 |
brush border epithelial cell | 8.33e-20 | 6 |
gut absorptive cell | 8.33e-20 | 6 |
enterocyte | 8.33e-20 | 6 |
endo-epithelial cell | 1.02e-19 | 15 |
endodermal cell | 3.30e-18 | 20 |
columnar/cuboidal epithelial cell | 5.77e-17 | 7 |
intestinal crypt stem cell | 1.54e-15 | 3 |
M cell of gut | 3.90e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.81e-43 | 13 |
wall of intestine | 1.81e-43 | 13 |
gastrointestinal system mucosa | 1.81e-43 | 13 |
mucosa | 1.80e-37 | 15 |
epithelium of mucosa | 1.81e-33 | 9 |
gastrointestinal system epithelium | 1.81e-33 | 9 |
intestinal epithelium | 1.81e-33 | 9 |
intestine | 5.46e-28 | 31 |
simple columnar epithelium | 3.19e-27 | 11 |
organ component layer | 7.95e-23 | 24 |
gastrointestinal system | 9.64e-18 | 47 |
ileal mucosa | 2.98e-15 | 3 |
ileum | 2.98e-15 | 3 |
mucosa of small intestine | 2.98e-15 | 3 |
wall of small intestine | 2.98e-15 | 3 |
small intestine | 1.42e-11 | 4 |
subdivision of digestive tract | 4.94e-07 | 114 |
digestive system | 7.21e-07 | 116 |
digestive tract | 7.21e-07 | 116 |
primitive gut | 7.21e-07 | 116 |