FFCP PHASE1:Mm9::chr18:64499674..64499696,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=225631|HGNC=|MCL_coexpression_id=1413|UniProt=Q6XBJ3|association_with_transcript=-305bp_to_ENSMUST00000115145_5end|description=CAGE_peak_1_at_Onecut2_5end|id=chr18:64499674..64499696,+|ontology_enrichment_celltype=CL:0000066!2.20e-09!25;CL:0000223!2.53e-08!20;CL:0002563!4.87e-07!9;CL:0002251!4.87e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,3.59e-09,25;CL:0000223,6.88e-09,20;CL:0002563,7.59e-08,9;CL:0002251,7.59e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.09e-13!22;UBERON:0007499!3.09e-13!22;UBERON:0006925!3.09e-13!22;UBERON:0009497!3.09e-13!22;UBERON:0000015!3.09e-13!22;UBERON:0002423!3.09e-13!22;UBERON:0006235!3.09e-13!22;UBERON:0008835!3.09e-13!22;UBERON:0003894!3.09e-13!22;UBERON:0004161!3.09e-13!22;UBERON:0008836!3.09e-13!22;UBERON:0009854!5.43e-12!23;UBERON:0009856!5.43e-12!23;UBERON:0000160!7.25e-10!43;UBERON:0002365!7.34e-10!25;UBERON:0002330!7.34e-10!25;UBERON:0005409!4.10e-08!59;UBERON:0003350!4.87e-07!9;UBERON:0004808!4.87e-07!9;UBERON:0001277!4.87e-07!9;UBERON:0000344!6.90e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.01e-15,22;UBERON:0007499,6.01e-15,22;UBERON:0006925,6.01e-15,22;UBERON:0009497,6.01e-15,22;UBERON:0000015,6.01e-15,22;UBERON:0002423,6.01e-15,22;UBERON:0006235,6.01e-15,22;UBERON:0008835,6.01e-15,22;UBERON:0003894,6.01e-15,22;UBERON:0004161,6.01e-15,22;UBERON:0008836,6.01e-15,22;UBERON:0000160,7.16e-15,31;UBERON:0009854,8.42e-14,23;UBERON:0009856,8.42e-14,23;UBERON:0002365,8.22e-12,25;UBERON:0002330,8.22e-12,25;UBERON:0005409,1.19e-11,47;UBERON:0001007,4.08e-08,116;UBERON:0001555,4.08e-08,116;UBERON:0007026,4.08e-08,116;UBERON:0003350,7.59e-08,9;UBERON:0004808,7.59e-08,9;UBERON:0001277,7.59e-08,9;UBERON:0003929,9.05e-08,55;UBERON:0004119,1.32e-07,118;UBERON:0000925,1.32e-07,118;UBERON:0006595,1.32e-07,118;UBERON:0000344,1.73e-07,15;UBERON:0004921,2.42e-07,114|phase1_expression=0.640595388419176,90.3846305785945,75.9848729780525,115.541328719209,90.1612313903425,51.0352986612145,51.6283935716112,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.340173160604279,0,0,38.7181663160044,18.5821517664408,33.3054539186712,32.7379117080897,29.9505013433386,0,0.504060259519861,1.55211357458713,0,0,0,28.8851619751275,13.4650062740379,27.3586937391575,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,8.29497489524351,4.7609188134483,7.60597684207415,0,0.889294796111139,0,0,0,0.299600110518405,0,1.03689612308478,1.21505344498522,0.630974884054146,1.14260393761521,0.883474163806454,0.61245399607477,0.383381884072945,0,2.20231761998777,1.53224805702225,1.68967186581868,9.75958529203434,8.59983849862651,9.37644067002168,0.558365998002762,3.93933827022176,1.22238598221448,3.83017161115768,1.28134512719193,5.96478226640962,0.37863096666592,1.51143120213571,34.204009666798,24.0918685554788,17.6792546764015,37.7792234146472,74.7242880064819,82.8849741130071,11.7973312910672,2.38602451609281,1.55871602761721,1.06001872353102,0.704217098883403,2.56652954828636,12.7402619853323,7.11066703153331,0.216491041011214,0,0.505524445014783,20.3247305899927,0.517875767294343,1.63286352971307,1.21439728736295,0.608930956624282,1.61430848079241,0.904335843315735,0.940709657085638,0.879666139307728,0.494389935468748,0.433798070759735,0,0,0,0,0,2.63502717310392,2.09446706813455,32.4430460114911,0,0,0,4.04434726393021,10.5225138648284,1.13088916901578,2.25971616249959,0.767146371990992,2.0778804455956,3.56930778749067,0,0,0,0.631325567659422,7.80722657776222,4.82794419310293,11.1638520479317,7.38453607395004,7.34794190834341,9.09607414022434,6.46541899462129,2.06962696591213,0,0.567318240503458,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.828503090142008,1.17263029990548,0,0,0,0.308534225774757,0,0.268273401399619,0,0.493679549740441,0,0.162137619091711,0,0,0,2.73376933133365,4.73361216944708,173.13944228351,46.0143985994567,2.98603550749328,11.6118335930219,20.1033239662466,26.6222252502812,29.7986578752126,22.0661726290569,28.9462727542152,21.7402620235694,23.3741744184251,20.8904295643208,30.6093616777019,31.4586793028978,16.4264917904768,25.0918004300503,0,0.571242563048644,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,77.3741356697459,11.1786220829783,8.45203678986773,8.31989815823959,11.5630269191447,9.64708639009667,15.2775511068852,33.6604480817448,16.6999283578286,20.0429831627299,230.029130443767,33.4926852901653,39.3167468124346,52.7889854909464,47.5403145833067,37.1481511449793,0,0.189491411770485,0.162964976442026,0.678980343100753,0,0,0.476087281772027,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.04750385139728,2.62295912602681,0,0,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,0.849229592366497,1.21443210502468,1.75353514746787,1.18586333383957,0.642642632843614,4.68402281187286,0,0,0,0,0,0,0.943025398779491,1.77181135728464,0.614870295887855,11.62927319257,2.54473610634254,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,2.16073312837572,1.4229455216103,0.428674070063185,0.177340233642274,1.60531935841864,1.64549020602121,1.2178597964584,0.938686832254841,0.42366414172764,0.441056796109924,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,25.6503136234269,1.66882771809459,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,3.16335993581135,4.87966721104437,11.3405607862891,6.27264888043406,8.95286511359328,3.37160865962052,5.2898211664215,1.30877970992015,0,0,0,0,0.66183396182839,0.388902376688095,0.258319646955462,0.675824501963113,0.704143431874524,1.43224823328345,1.15345278868282,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0.443971906748129,0.62799699626633,0.503653849092235,0,0,0,0,0,1.12950368523413,0.460325236507177,1.71868654031819,0.515559547031063,2.05524755931193,1.5107877947794,0,0.900642406448441,0,1.03552062350364,9.75601067291261,7.18244772121856,3.41467211508268,4.86213434136588,7.1268475293514,8.64064489715066,4.88942801163553,4.73880631649457,8.3438994493872,4.04315538822076,8.11133759648767,7.35642731405697,5.24392441831341,6.01836432605771,5.97328877138378,6.66811167796303,5.44656331940821,3.6652751888104,3.29668720642645,6.77115032618228,6.51451579532289,6.03417740941747,6.67621331852499,6.39524233182245,5.45834406408918,4.65380343404221,3.47563148458268,5.5244639401947,3.80251518768413,7.2948495315506,5.57584585183618,5.1222330835293,4.91077251803627,4.02835787083512,6.75173138433995,2.24829520144151,2.57324769289949,6.66100267549725,0.765153328275374,0.882365676478062,0|short_description=p1@Onecut2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:225631 | |||
|HGNC= | |||
|MCL_coexpression_id=1413 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6XBJ3 | |||
|association_with_transcript=-305bp_to_ENSMUST00000115145_5end | |||
|cluster_id=chr18:64499674..64499696,+ | |||
|description=CAGE_peak_1_at_Onecut2_5end | |||
|id=chr18:64499674..64499696,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.20e-09!25;CL:0000223!2.53e-08!20;CL:0002563!4.87e-07!9;CL:0002251!4.87e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.59e-09,25;CL:0000223,6.88e-09,20;CL:0002563,7.59e-08,9;CL:0002251,7.59e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.09e-13!22;UBERON:0007499!3.09e-13!22;UBERON:0006925!3.09e-13!22;UBERON:0009497!3.09e-13!22;UBERON:0000015!3.09e-13!22;UBERON:0002423!3.09e-13!22;UBERON:0006235!3.09e-13!22;UBERON:0008835!3.09e-13!22;UBERON:0003894!3.09e-13!22;UBERON:0004161!3.09e-13!22;UBERON:0008836!3.09e-13!22;UBERON:0009854!5.43e-12!23;UBERON:0009856!5.43e-12!23;UBERON:0000160!7.25e-10!43;UBERON:0002365!7.34e-10!25;UBERON:0002330!7.34e-10!25;UBERON:0005409!4.10e-08!59;UBERON:0003350!4.87e-07!9;UBERON:0004808!4.87e-07!9;UBERON:0001277!4.87e-07!9;UBERON:0000344!6.90e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.01e-15,22;UBERON:0007499,6.01e-15,22;UBERON:0006925,6.01e-15,22;UBERON:0009497,6.01e-15,22;UBERON:0000015,6.01e-15,22;UBERON:0002423,6.01e-15,22;UBERON:0006235,6.01e-15,22;UBERON:0008835,6.01e-15,22;UBERON:0003894,6.01e-15,22;UBERON:0004161,6.01e-15,22;UBERON:0008836,6.01e-15,22;UBERON:0000160,7.16e-15,31;UBERON:0009854,8.42e-14,23;UBERON:0009856,8.42e-14,23;UBERON:0002365,8.22e-12,25;UBERON:0002330,8.22e-12,25;UBERON:0005409,1.19e-11,47;UBERON:0001007,4.08e-08,116;UBERON:0001555,4.08e-08,116;UBERON:0007026,4.08e-08,116;UBERON:0003350,7.59e-08,9;UBERON:0004808,7.59e-08,9;UBERON:0001277,7.59e-08,9;UBERON:0003929,9.05e-08,55;UBERON:0004119,1.32e-07,118;UBERON:0000925,1.32e-07,118;UBERON:0006595,1.32e-07,118;UBERON:0000344,1.73e-07,15;UBERON:0004921,2.42e-07,114 | |||
|phase1_expression=0.640595388419176,90.3846305785945,75.9848729780525,115.541328719209,90.1612313903425,51.0352986612145,51.6283935716112,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.340173160604279,0,0,38.7181663160044,18.5821517664408,33.3054539186712,32.7379117080897,29.9505013433386,0,0.504060259519861,1.55211357458713,0,0,0,28.8851619751275,13.4650062740379,27.3586937391575,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,8.29497489524351,4.7609188134483,7.60597684207415,0,0.889294796111139,0,0,0,0.299600110518405,0,1.03689612308478,1.21505344498522,0.630974884054146,1.14260393761521,0.883474163806454,0.61245399607477,0.383381884072945,0,2.20231761998777,1.53224805702225,1.68967186581868,9.75958529203434,8.59983849862651,9.37644067002168,0.558365998002762,3.93933827022176,1.22238598221448,3.83017161115768,1.28134512719193,5.96478226640962,0.37863096666592,1.51143120213571,34.204009666798,24.0918685554788,17.6792546764015,37.7792234146472,74.7242880064819,82.8849741130071,11.7973312910672,2.38602451609281,1.55871602761721,1.06001872353102,0.704217098883403,2.56652954828636,12.7402619853323,7.11066703153331,0.216491041011214,0,0.505524445014783,20.3247305899927,0.517875767294343,1.63286352971307,1.21439728736295,0.608930956624282,1.61430848079241,0.904335843315735,0.940709657085638,0.879666139307728,0.494389935468748,0.433798070759735,0,0,0,0,0,2.63502717310392,2.09446706813455,32.4430460114911,0,0,0,4.04434726393021,10.5225138648284,1.13088916901578,2.25971616249959,0.767146371990992,2.0778804455956,3.56930778749067,0,0,0,0.631325567659422,7.80722657776222,4.82794419310293,11.1638520479317,7.38453607395004,7.34794190834341,9.09607414022434,6.46541899462129,2.06962696591213,0,0.567318240503458,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.828503090142008,1.17263029990548,0,0,0,0.308534225774757,0,0.268273401399619,0,0.493679549740441,0,0.162137619091711,0,0,0,2.73376933133365,4.73361216944708,173.13944228351,46.0143985994567,2.98603550749328,11.6118335930219,20.1033239662466,26.6222252502812,29.7986578752126,22.0661726290569,28.9462727542152,21.7402620235694,23.3741744184251,20.8904295643208,30.6093616777019,31.4586793028978,16.4264917904768,25.0918004300503,0,0.571242563048644,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,77.3741356697459,11.1786220829783,8.45203678986773,8.31989815823959,11.5630269191447,9.64708639009667,15.2775511068852,33.6604480817448,16.6999283578286,20.0429831627299,230.029130443767,33.4926852901653,39.3167468124346,52.7889854909464,47.5403145833067,37.1481511449793,0,0.189491411770485,0.162964976442026,0.678980343100753,0,0,0.476087281772027,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.04750385139728,2.62295912602681,0,0,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,0.849229592366497,1.21443210502468,1.75353514746787,1.18586333383957,0.642642632843614,4.68402281187286,0,0,0,0,0,0,0.943025398779491,1.77181135728464,0.614870295887855,11.62927319257,2.54473610634254,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,2.16073312837572,1.4229455216103,0.428674070063185,0.177340233642274,1.60531935841864,1.64549020602121,1.2178597964584,0.938686832254841,0.42366414172764,0.441056796109924,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,25.6503136234269,1.66882771809459,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,3.16335993581135,4.87966721104437,11.3405607862891,6.27264888043406,8.95286511359328,3.37160865962052,5.2898211664215,1.30877970992015,0,0,0,0,0.66183396182839,0.388902376688095,0.258319646955462,0.675824501963113,0.704143431874524,1.43224823328345,1.15345278868282,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0.443971906748129,0.62799699626633,0.503653849092235,0,0,0,0,0,1.12950368523413,0.460325236507177,1.71868654031819,0.515559547031063,2.05524755931193,1.5107877947794,0,0.900642406448441,0,1.03552062350364,9.75601067291261,7.18244772121856,3.41467211508268,4.86213434136588,7.1268475293514,8.64064489715066,4.88942801163553,4.73880631649457,8.3438994493872,4.04315538822076,8.11133759648767,7.35642731405697,5.24392441831341,6.01836432605771,5.97328877138378,6.66811167796303,5.44656331940821,3.6652751888104,3.29668720642645,6.77115032618228,6.51451579532289,6.03417740941747,6.67621331852499,6.39524233182245,5.45834406408918,4.65380343404221,3.47563148458268,5.5244639401947,3.80251518768413,7.2948495315506,5.57584585183618,5.1222330835293,4.91077251803627,4.02835787083512,6.75173138433995,2.24829520144151,2.57324769289949,6.66100267549725,0.765153328275374,0.882365676478062,0 | |||
|short_description=p1@Onecut2 | |||
}} |
Revision as of 00:23, 6 August 2015
Short description: | p1@Onecut2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Onecut2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1413 |
Association with transcript: | -305bp_to_ENSMUST00000115145_5end |
EntrezGene: | 225631 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.59e-09 | 25 |
endodermal cell | 6.88e-09 | 20 |
intestinal epithelial cell | 7.59e-08 | 9 |
epithelial cell of alimentary canal | 7.59e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
liver | 6.01e-15 | 22 |
epithelial sac | 6.01e-15 | 22 |
digestive gland | 6.01e-15 | 22 |
epithelium of foregut-midgut junction | 6.01e-15 | 22 |
anatomical boundary | 6.01e-15 | 22 |
hepatobiliary system | 6.01e-15 | 22 |
foregut-midgut junction | 6.01e-15 | 22 |
hepatic diverticulum | 6.01e-15 | 22 |
liver primordium | 6.01e-15 | 22 |
septum transversum | 6.01e-15 | 22 |
liver bud | 6.01e-15 | 22 |
intestine | 7.16e-15 | 31 |
digestive tract diverticulum | 8.42e-14 | 23 |
sac | 8.42e-14 | 23 |
exocrine gland | 8.22e-12 | 25 |
exocrine system | 8.22e-12 | 25 |
gastrointestinal system | 1.19e-11 | 47 |
digestive system | 4.08e-08 | 116 |
digestive tract | 4.08e-08 | 116 |
primitive gut | 4.08e-08 | 116 |
epithelium of mucosa | 7.59e-08 | 9 |
gastrointestinal system epithelium | 7.59e-08 | 9 |
intestinal epithelium | 7.59e-08 | 9 |
gut epithelium | 9.05e-08 | 55 |
endoderm-derived structure | 1.32e-07 | 118 |
endoderm | 1.32e-07 | 118 |
presumptive endoderm | 1.32e-07 | 118 |
mucosa | 1.73e-07 | 15 |
subdivision of digestive tract | 2.42e-07 | 114 |