FFCP PHASE1:Mm9::chr8:125626244..125626251,+: Difference between revisions
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{{FFCP|EntrezGene=100039656,100040416,100040605,270106|HGNC=|UniProt=P47963,Q5RKP3|association_with_transcript=0bp_to_ENSMUST00000000756,NM_016738,uc009nue.2_5end|description=CAGE_peak_4_at_Gm10071_5end,CAGE_peak_4_at_Gm12918_5end,CAGE_peak_4_at_Gm15710_5end,CAGE_peak_4_at_Rpl13_5end|id=chr8:125626244..125626251,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.07e-11,3;CL:0000351,1.07e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.07e-11,3;UBERON:0000307,1.07e-11,3;UBERON:0007010,1.07e-11,3|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.129123323441576,0.281577444303333,0,0.513653904676515,0.478632953972018,0,0,0.999329285446988,0.404950534779652,0,0.157731082679119,0,0,0.17008658030214,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0.665191531965914,0.635030673459631,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0,0.0958454710182364,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0.457438218012048,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.711858403995515,0.372798891650601,1.21161909333094,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,0.11418387971906,0,0,1.04091196059682,0.913396434936424,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,1.38219787324151,0.173824320192276,0,0,0.162241263067758,0.305518091550949,0.248813941220186,0,0.420883711772948,0.520481771850815,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.384341160854549,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,0,0.772043721344145,0.852490498186778,0.621377317606506,0.938104239924385,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.536546802799238,0,0,0.164167464079095,0,0,0,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0.296452627087149,1.16791574001266,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,0.568474235311454,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0.983609672260053,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0,0,0,1.21390318077491,0,0.754420319023592,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0,0,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0.740778109478847,0.376736914009382,0.546776910884101,0,0,0,0.414599921413271,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0,0.26175594198403,0,0,1.12738587736838,2.0932316446157,2.15096037594227,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.5208175393758,0.209718688851422,0.241584120826006,0.576060012515731,0.632022241256357,0.810900861160657,0.410843828659309,0.77952493786677,0.716106782669926,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0.304827226619999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.665957860122194,1.61484941897056,1.17519231454855,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.31136204275253,0.399024873401031,0.853668028770671,0,0.628839487883947,0,0,0,0,0,0,0.188626341386076,0,0,0.229741875822453,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0,0,0,0|short_description=p4@Gm10071,p4@Gm12918,p4@Gm15710,p4@Rpl13}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100039656,entrezgene:100040416,entrezgene:100040605,entrezgene:270106 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P47963,uniprot:Q5RKP3 | |||
|association_with_transcript=0bp_to_ENSMUST00000000756,NM_016738,uc009nue.2_5end | |||
|cluster_id=chr8:125626244..125626251,+ | |||
|description=CAGE_peak_4_at_Gm10071_5end,CAGE_peak_4_at_Gm12918_5end,CAGE_peak_4_at_Gm15710_5end,CAGE_peak_4_at_Rpl13_5end | |||
|id=chr8:125626244..125626251,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.07e-11,3;CL:0000351,1.07e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.07e-11,3;UBERON:0000307,1.07e-11,3;UBERON:0007010,1.07e-11,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.129123323441576,0.281577444303333,0,0.513653904676515,0.478632953972018,0,0,0.999329285446988,0.404950534779652,0,0.157731082679119,0,0,0.17008658030214,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0.665191531965914,0.635030673459631,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0,0.0958454710182364,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0.457438218012048,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.711858403995515,0.372798891650601,1.21161909333094,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,0.11418387971906,0,0,1.04091196059682,0.913396434936424,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,1.38219787324151,0.173824320192276,0,0,0.162241263067758,0.305518091550949,0.248813941220186,0,0.420883711772948,0.520481771850815,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.384341160854549,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,0,0.772043721344145,0.852490498186778,0.621377317606506,0.938104239924385,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.536546802799238,0,0,0.164167464079095,0,0,0,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0.296452627087149,1.16791574001266,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,0.568474235311454,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0.983609672260053,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0,0,0,1.21390318077491,0,0.754420319023592,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0,0,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0.740778109478847,0.376736914009382,0.546776910884101,0,0,0,0.414599921413271,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0,0.26175594198403,0,0,1.12738587736838,2.0932316446157,2.15096037594227,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.5208175393758,0.209718688851422,0.241584120826006,0.576060012515731,0.632022241256357,0.810900861160657,0.410843828659309,0.77952493786677,0.716106782669926,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0.304827226619999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.665957860122194,1.61484941897056,1.17519231454855,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.31136204275253,0.399024873401031,0.853668028770671,0,0.628839487883947,0,0,0,0,0,0,0.188626341386076,0,0,0.229741875822453,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Gm10071,p4@Gm12918,p4@Gm15710,p4@Rpl13 | |||
}} |
Revision as of 02:22, 6 August 2015
Short description: | p4@Gm10071, p4@Gm12918, p4@Gm15710, p4@Rpl13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gm10071_5end, CAGE_peak_4_at_Gm12918_5end, CAGE_peak_4_at_Gm15710_5end, CAGE_peak_4_at_Rpl13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000000756, NM_016738, uc009nue.2_5end |
EntrezGene: | 100039656,100040416,100040605,270106 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.07e-11 | 3 |
trophoblast cell | 1.07e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.07e-11 | 3 |
blastula | 1.07e-11 | 3 |
cleaving embryo | 1.07e-11 | 3 |