FFCP PHASE1:Mm9::chr18:73975084..73975107,-: Difference between revisions
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{{FFCP|EntrezGene=107029|HGNC=|MCL_coexpression_id=24|UniProt=Q99KE1,Q3V2Y4|association_with_transcript=-38bp_to_ENSMUST00000025439,NM_145494,uc008fox.1,uc008foy.1,uc012beu.1_5end|description=CAGE_peak_1_at_Me2_5end|id=chr18:73975084..73975107,-|ontology_enrichment_celltype=CL:0002563!5.59e-07!9;CL:0002251!5.59e-07!9;CL:0000063!7.65e-07!66|ontology_enrichment_celltype_v019_2=CL:0002563,5.59e-07,9;CL:0002251,5.59e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.76e-19!59;UBERON:0000160!1.12e-15!43;UBERON:0001007!1.33e-12!128;UBERON:0001555!1.33e-12!128;UBERON:0007026!1.33e-12!128;UBERON:0004119!2.29e-12!130;UBERON:0000925!2.29e-12!130;UBERON:0006595!2.29e-12!130;UBERON:0004921!1.10e-11!126;UBERON:0004185!1.10e-11!126;UBERON:0004923!2.82e-11!24;UBERON:0000344!1.39e-10!15;UBERON:0001242!1.85e-09!13;UBERON:0000060!1.85e-09!13;UBERON:0001262!1.85e-09!13;UBERON:0004786!1.85e-09!13;UBERON:0002193!9.69e-08!48;UBERON:0003350!5.59e-07!9;UBERON:0004808!5.59e-07!9;UBERON:0001277!5.59e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.35e-19,47;UBERON:0000160,6.35e-17,31;UBERON:0001007,1.46e-11,116;UBERON:0001555,1.46e-11,116;UBERON:0007026,1.46e-11,116;UBERON:0004119,2.57e-11,118;UBERON:0000925,2.57e-11,118;UBERON:0006595,2.57e-11,118;UBERON:0004923,2.82e-11,24;UBERON:0004921,1.13e-10,114;UBERON:0000344,1.39e-10,15;UBERON:0001242,1.85e-09,13;UBERON:0001262,1.85e-09,13;UBERON:0004786,1.85e-09,13;UBERON:0002193,9.69e-08,48;UBERON:0002405,9.69e-08,48;UBERON:0003350,5.59e-07,9;UBERON:0004808,5.59e-07,9;UBERON:0001277,5.59e-07,9|phase1_expression=47.2439098959142,451.225202077694,414.959306323257,682.964189130822,642.148325791217,139.843433502604,109.09710315811,72.5673077741659,40.6879407018317,54.3029701067025,17.1217968225505,25.4473187195123,79.9507408778731,94.3266142100982,49.3002447487181,42.9247566866431,34.2785320282792,43.5337788194368,53.0632858054209,42.8633548316011,12.246233781754,39.4185076267515,44.6651639427579,136.153551797189,165.174682368362,383.586952028833,336.425119000237,223.012725829895,376.436393943077,617.72584804159,146.120406521846,33.0215950199008,16.6067492647834,15.8481681015439,161.756907060714,163.242421742039,157.414573678287,93.3325536543304,93.760241342856,98.9459876110479,99.4111214772414,90.8450494994733,113.123912256259,6.54663453473002,7.60326984146359,8.62669735159903,4.69434806608824,27.6891948603167,18.2339531669612,16.9154012194627,56.9744736015225,31.6255641602937,33.2209559994318,41.3456420946466,35.9620365082436,12.3484529297255,13.4670716771216,12.3761302146586,11.9366711907163,10.0508286061686,10.775133859605,19.6529828600097,40.0182658250013,9.89889689009539,12.8552627133707,11.3676818391376,7.78960287347852,11.1423308543251,10.5763404554647,11.4755047581937,8.83364837675805,10.5690864229407,7.73039893330647,10.9016811301309,10.2554653989513,10.1114066527102,18.7196997698961,16.8547286272448,14.4390141260869,13.3205150607496,13.174220678747,15.106487746146,10.8881369610539,16.8828783009504,16.8078072554491,10.3120004915784,12.6710795911202,12.1159639786445,27.564334373279,38.5414956544606,26.957397449256,12.9063581547208,0,0,2.59910566979068,2.68816132258401,23.8755514223978,22.8376632254597,16.8860902991865,17.666978725517,14.2251853974447,8.98285341900225,0,14.2213340630666,22.9480503471887,17.7351905832569,23.7596489156948,79.3577964047467,49.4571357766098,8.90652834388949,18.2159593104443,12.1786191324856,10.1470818792666,9.19408107370998,7.52567725668511,11.0586600370114,43.0119243857811,8.24216334443496,38.9228642857945,14.5590164952668,34.230435361361,36.3656439851417,210.622690176478,10.2473278954042,12.7762491156208,343.845196310764,38.5804700909063,34.1944556666242,37.231576532408,15.2786452192919,29.2800385803921,8.67015029578764,10.081810571152,11.5071955798649,16.8308316093244,11.8436122039463,9.47106083807942,32.096998417404,2.77995034277042,14.7309299120532,12.1012011955314,11.9549094305406,12.7844112161798,12.0563854268572,9.86529237694254,13.0675994690547,12.087522468205,21.7310831420773,18.5388473922244,15.3175924935934,12.3165786914764,11.3981780862339,12.5121262151519,9.05455632957633,8.64284972913362,24.2821805518562,47.7504967373,37.058098624519,34.0996199274711,18.2270679831242,15.7132460187334,13.5046546095761,9.70653415899362,9.83821158737019,7.86762275725629,7.20855228726264,8.85302224618743,6.07179780309281,8.22799249567402,7.22336841948019,5.10733500138891,5.99419948443863,9.22110484222413,5.77087600669599,7.99101804543684,11.6282211988591,172.148185934559,296.449085229833,20.6889603019177,26.2427439202296,43.5572019268675,47.5973118111088,44.9203648566638,43.561668379776,199.302205848695,39.3630501790386,38.4542869464412,41.9798156006828,39.5777096851814,201.335547538546,218.947844523065,231.402159521575,17.6391147886366,21.5929688832387,11.270773567308,14.4592442770173,12.2190066915604,10.4502371636575,8.47369597465048,9.00421902675573,11.303908404579,9.13139013021324,5.039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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107029 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99KE1,uniprot:Q3V2Y4 | |||
|association_with_transcript=-38bp_to_ENSMUST00000025439,NM_145494,uc008fox.1,uc008foy.1,uc012beu.1_5end | |||
|cluster_id=chr18:73975084..73975107,- | |||
|description=CAGE_peak_1_at_Me2_5end | |||
|id=chr18:73975084..73975107,- | |||
|ontology_enrichment_celltype=CL:0002563!5.59e-07!9;CL:0002251!5.59e-07!9;CL:0000063!7.65e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.59e-07,9;CL:0002251,5.59e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.76e-19!59;UBERON:0000160!1.12e-15!43;UBERON:0001007!1.33e-12!128;UBERON:0001555!1.33e-12!128;UBERON:0007026!1.33e-12!128;UBERON:0004119!2.29e-12!130;UBERON:0000925!2.29e-12!130;UBERON:0006595!2.29e-12!130;UBERON:0004921!1.10e-11!126;UBERON:0004185!1.10e-11!126;UBERON:0004923!2.82e-11!24;UBERON:0000344!1.39e-10!15;UBERON:0001242!1.85e-09!13;UBERON:0000060!1.85e-09!13;UBERON:0001262!1.85e-09!13;UBERON:0004786!1.85e-09!13;UBERON:0002193!9.69e-08!48;UBERON:0003350!5.59e-07!9;UBERON:0004808!5.59e-07!9;UBERON:0001277!5.59e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.35e-19,47;UBERON:0000160,6.35e-17,31;UBERON:0001007,1.46e-11,116;UBERON:0001555,1.46e-11,116;UBERON:0007026,1.46e-11,116;UBERON:0004119,2.57e-11,118;UBERON:0000925,2.57e-11,118;UBERON:0006595,2.57e-11,118;UBERON:0004923,2.82e-11,24;UBERON:0004921,1.13e-10,114;UBERON:0000344,1.39e-10,15;UBERON:0001242,1.85e-09,13;UBERON:0001262,1.85e-09,13;UBERON:0004786,1.85e-09,13;UBERON:0002193,9.69e-08,48;UBERON:0002405,9.69e-08,48;UBERON:0003350,5.59e-07,9;UBERON:0004808,5.59e-07,9;UBERON:0001277,5.59e-07,9 | |||
|phase1_expression=47.2439098959142,451.225202077694,414.959306323257,682.964189130822,642.148325791217,139.843433502604,109.09710315811,72.5673077741659,40.6879407018317,54.3029701067025,17.1217968225505,25.4473187195123,79.9507408778731,94.3266142100982,49.3002447487181,42.9247566866431,34.2785320282792,43.5337788194368,53.0632858054209,42.8633548316011,12.246233781754,39.4185076267515,44.6651639427579,136.153551797189,165.174682368362,383.586952028833,336.425119000237,223.012725829895,376.436393943077,617.72584804159,146.120406521846,33.0215950199008,16.6067492647834,15.8481681015439,161.756907060714,163.242421742039,157.414573678287,93.3325536543304,93.760241342856,98.9459876110479,99.4111214772414,90.8450494994733,113.123912256259,6.54663453473002,7.60326984146359,8.62669735159903,4.69434806608824,27.6891948603167,18.2339531669612,16.9154012194627,56.9744736015225,31.6255641602937,33.2209559994318,41.3456420946466,35.9620365082436,12.3484529297255,13.4670716771216,12.3761302146586,11.9366711907163,10.0508286061686,10.775133859605,19.6529828600097,40.0182658250013,9.89889689009539,12.8552627133707,11.3676818391376,7.78960287347852,11.1423308543251,10.5763404554647,11.4755047581937,8.83364837675805,10.5690864229407,7.73039893330647,10.9016811301309,10.2554653989513,10.1114066527102,18.7196997698961,16.8547286272448,14.4390141260869,13.3205150607496,13.174220678747,15.106487746146,10.8881369610539,16.8828783009504,16.8078072554491,10.3120004915784,12.6710795911202,12.1159639786445,27.564334373279,38.5414956544606,26.957397449256,12.9063581547208,0,0,2.59910566979068,2.68816132258401,23.8755514223978,22.8376632254597,16.8860902991865,17.666978725517,14.2251853974447,8.98285341900225,0,14.2213340630666,22.9480503471887,17.7351905832569,23.7596489156948,79.3577964047467,49.4571357766098,8.90652834388949,18.2159593104443,12.1786191324856,10.1470818792666,9.19408107370998,7.52567725668511,11.0586600370114,43.0119243857811,8.24216334443496,38.9228642857945,14.5590164952668,34.230435361361,36.3656439851417,210.622690176478,10.2473278954042,12.7762491156208,343.845196310764,38.5804700909063,34.1944556666242,37.231576532408,15.2786452192919,29.2800385803921,8.67015029578764,10.081810571152,11.5071955798649,16.8308316093244,11.8436122039463,9.47106083807942,32.096998417404,2.77995034277042,14.7309299120532,12.1012011955314,11.9549094305406,12.7844112161798,12.0563854268572,9.86529237694254,13.0675994690547,12.087522468205,21.7310831420773,18.5388473922244,15.3175924935934,12.3165786914764,11.3981780862339,12.5121262151519,9.05455632957633,8.64284972913362,24.2821805518562,47.7504967373,37.058098624519,34.0996199274711,18.2270679831242,15.7132460187334,13.5046546095761,9.70653415899362,9.83821158737019,7.86762275725629,7.20855228726264,8.85302224618743,6.07179780309281,8.22799249567402,7.22336841948019,5.10733500138891,5.99419948443863,9.22110484222413,5.77087600669599,7.99101804543684,11.6282211988591,172.148185934559,296.449085229833,20.6889603019177,26.2427439202296,43.5572019268675,47.5973118111088,44.9203648566638,43.561668379776,199.302205848695,39.3630501790386,38.4542869464412,41.9798156006828,39.5777096851814,201.335547538546,218.947844523065,231.402159521575,17.6391147886366,21.5929688832387,11.270773567308,14.4592442770173,12.2190066915604,10.4502371636575,8.47369597465048,9.00421902675573,11.303908404579,9.13139013021324,5.03969466048153,29.8652739231808,31.6459982132257,31.7055578462644,33.6747801504915,33.5236252055859,21.8978232532021,19.5633373466551,14.4300351829781,19.4938603363538,21.5652309791032,13.0249331683976,10.2972432127805,7.82994521636046,5.20252499213545,4.82443521363367,20.8771104888263,15.1593129416388,14.6668478797823,15.1073126339917,13.1426539041561,10.0503754465089,10.7119638398706,12.4885534628991,13.24135210492,9.52298165489732,13.0752910299139,13.4367918066905,17.4411831684555,17.6471851469444,18.0949540727127,23.9318500880232,5.4094070032094,8.82997588175144,14.1284519189257,13.1277088983268,10.3279015587306,7.82659874333556,20.8235424814729,17.5697434933487,18.5264122050207,18.161628644394,15.81870585985,16.1353622549635,14.9779959619711,15.1973046113882,19.7643888973262,10.6036034419196,71.6797430301757,23.5046596840777,21.501078634672,20.1263550026493,17.2568679841952,20.1507928008635,22.9765903293211,20.1807435338811,18.6040192514887,19.3684143204674,19.3821219876166,22.1755574981278,24.9548164869305,24.6508671189936,28.4630243152497,21.6584640821192,10.5536277783674,17.2858650270058,13.4533031134065,16.9326257674958,13.6551979904551,15.5180871313801,12.9993726275676,8.82948352432338,19.2430800612242,12.7099242518292,23.376010193826,8.07942639413252,7.10443477461984,9.288190438936,8.23669173621642,14.2802582778203,174.88850197791,18.3571048990405,45.1099125306331,23.5281029478074,30.9274860707418,43.5131135680836,48.936533524127,48.2721945465763,23.2870449091582,24.2116012519928,22.8029956777299,104.059097363647,19.1383276116587,17.2821547057821,19.548966688746,16.727063681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| |||
|short_description=p1@Me2 | |||
}} |
Revision as of 02:48, 6 August 2015
Short description: | p1@Me2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Me2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -38bp_to_ENSMUST00000025439, NM_145494, uc008fox.1, uc008foy.1, uc012beu.1_5end |
EntrezGene: | 107029 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.59e-07 | 9 |
epithelial cell of alimentary canal | 5.59e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.35e-19 | 47 |
intestine | 6.35e-17 | 31 |
digestive system | 1.46e-11 | 116 |
digestive tract | 1.46e-11 | 116 |
primitive gut | 1.46e-11 | 116 |
endoderm-derived structure | 2.57e-11 | 118 |
endoderm | 2.57e-11 | 118 |
presumptive endoderm | 2.57e-11 | 118 |
organ component layer | 2.82e-11 | 24 |
subdivision of digestive tract | 1.13e-10 | 114 |
mucosa | 1.39e-10 | 15 |
intestinal mucosa | 1.85e-09 | 13 |
wall of intestine | 1.85e-09 | 13 |
gastrointestinal system mucosa | 1.85e-09 | 13 |
hemolymphoid system | 9.69e-08 | 48 |
immune system | 9.69e-08 | 48 |
epithelium of mucosa | 5.59e-07 | 9 |
gastrointestinal system epithelium | 5.59e-07 | 9 |
intestinal epithelium | 5.59e-07 | 9 |